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From genome structure to function: insights into structural variation in microbiology

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CURRENT OPINION IN MICROBIOLOGY
卷 69, 期 -, 页码 -

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CURRENT BIOLOGY LTD
DOI: 10.1016/j.mib.2022.102192

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资金

  1. National Institutes of Health [R01 AI148623, R01 AI143757, DK12829201, HG000044, HL120824]
  2. Emerson Collective
  3. Stand Up 2 Cancer Foundation

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Structural variation in bacterial genomes plays a crucial role in bacterial evolution, regulating gene expression and promoting niche adaptation. However, the study of variation in bacterial genomes and metagenomes has been insufficient. Recent advances in genome sequencing technology and the development of new bioinformatic pipelines hold promise in further understanding microbial genomics.
Structural variation in bacterial genomes is an important evolutionary driver. Genomic rearrangements, such as inversions, duplications, and insertions, can regulate gene expression and promote niche adaptation. Importantly, many of these variations are reversible and preprogrammed to generate heterogeneity. While many tools have been developed to detect structural variation in eukaryotic genomes, variation in bacterial genomes and metagenomes remains understudied. However, recent advances in genome sequencing technology and the development of new bioinformatic pipelines hold promise in further understanding microbial genomics.

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