相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。Spotlight on alternative frame coding: Two long overlapping genes in Pseudomonas aeruginosa are translated and under purifying selection
Michaela Kreitmeier et al.
ISCIENCE (2022)
Coupled Transcription-Translation in Prokaryotes: An Old Couple With New Surprises
Mikel Irastortza-Olaziregi et al.
FRONTIERS IN MICROBIOLOGY (2021)
PPD: A Manually Curated Database for Experimentally Verified Prokaryotic Promoters
Wei Su et al.
JOURNAL OF MOLECULAR BIOLOGY (2021)
Mineralization versus fermentation: evidence for two distinct anaerobic bacterial degradation pathways for dichloromethane
Gao Chen et al.
ISME JOURNAL (2020)
Solvent-based paint and varnish removers: a focused toxicologic review of existing and alternative constituents
Timur Durrani et al.
JOURNAL OF APPLIED TOXICOLOGY (2020)
Genome-Scale Transcription-Translation Mapping Reveals Features of Zymomonas mobilis Transcription Units and Promoters
Jessica M. Vera et al.
MSYSTEMS (2020)
Transcriptional regulation of organohalide pollutant utilisation in bacteria
Bruno Maucourt et al.
FEMS MICROBIOLOGY REVIEWS (2020)
Defining the Transcriptional and Post-transcriptional Landscapes of Mycobacterium smegmatis in Aerobic Growth and Hypoxia
M. Carla Martini et al.
FRONTIERS IN MICROBIOLOGY (2019)
Methanol consumption drives the bacterial chloromethane sink in a forest soil
Pauline Chaignaud et al.
ISME JOURNAL (2018)
N-terminome and proteogenomic analysis of the Methylobacterium extorquens DM4 reference strain for dichloromethane utilization
Sabrina Bibi-Triki et al.
JOURNAL OF PROTEOMICS (2018)
Leaderless mRNAs in the Spotlight: Ancient but Not Outdated!
Heather J. Beck et al.
MICROBIOLOGY SPECTRUM (2018)
Widespread Antisense Transcription in Prokaryotes
Jens Georg et al.
MICROBIOLOGY SPECTRUM (2018)
The increasing threat to stratospheric ozone from dichloromethane
Ryan Hossaini et al.
NATURE COMMUNICATIONS (2017)
Genomic and Transcriptomic Analysis of Growth-Supporting Dehalogenation of Chlorinated Methanes in Methylobacterium
Pauline Chaignaud et al.
FRONTIERS IN MICROBIOLOGY (2017)
Genome Sequence of the Dichloromethane-Degrading Bacterium Hyphomicrobium sp. Strain GJ21
Francoise Bringel et al.
GENOME ANNOUNCEMENTS (2017)
Genome-wide transcription start site mapping of Bradyrhizobium japonicum grown free-living or in symbiosis - a rich resource to identify new transcripts, proteins and to study gene regulation
Jelena Cuklina et al.
BMC GENOMICS (2016)
Genome-wide mapping of transcription start sites yields novel insights into the primary transcriptome of Pseudomonas putida
Isotta D'Arrigo et al.
ENVIRONMENTAL MICROBIOLOGY (2016)
Transcriptome analysis of thermophilic methylotrophic Bacillus methanolicus MGA3 using RNA-sequencing provides detailed insights into its previously uncharted transcriptional landscape
Marta Irla et al.
BMC GENOMICS (2015)
The global transcriptional landscape of Bacillus amyloliquefaciens XH7 and high-throughput screening of strong promoters based on RNA-seq data
Yuling Liao et al.
GENE (2015)
The MEME Suite
Timothy L. Bailey et al.
NUCLEIC ACIDS RESEARCH (2015)
The Global Regulatory Architecture of Transcription during the Caulobacter Cell Cycle
Bo Zhou et al.
PLOS GENETICS (2015)
Methylobacterium extorquens: methylotrophy and biotechnological applications
Andrea M. Ochsner et al.
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY (2015)
Global Transcriptional Start Site Mapping Using Differential RNA Sequencing Reveals Novel Antisense RNAs in Escherichia coli
Maureen K. Thomason et al.
JOURNAL OF BACTERIOLOGY (2015)
dRNA-Seq Reveals Genomewide TSSs and Noncoding RNAs of Plant Beneficial Rhizobacterium Bacillus amyloliquefaciens FZB42
Ben Fan et al.
PLOS ONE (2015)
TSSAR: TSS annotation regime for dRNA-seq data
Fabian Amman et al.
BMC BIOINFORMATICS (2014)
Differential RNA-seq: the approach behind and the biological insight gained
Cynthia M. Sharma et al.
CURRENT OPINION IN MICROBIOLOGY (2014)
Effective use of a horizontally-transferred pathway for dichloromethane catabolism requires post-transfer refinement
Joshua K. Michener et al.
ELIFE (2014)
A combination of improved differential and global RNA-seq reveals pervasive transcription initiation and events in all stages of the life-cycle of functional RNAs in Propionibacterium acnes, a major contributor to wide-spread human disease
Yu-fei Lin et al.
BMC GENOMICS (2013)
Global mapping of transcription start sites and promoter motifs in the symbiotic a-proteobacterium Sinorhizobium meliloti 1021
Jan-Philip Schlueter et al.
BMC GENOMICS (2013)
Software for Computing and Annotating Genomic Ranges
Michael Lawrence et al.
PLOS COMPUTATIONAL BIOLOGY (2013)
Functional genomics of dichloromethane utilization in Methylobacterium extorquens DM4
Emilie E. L. Muller et al.
ENVIRONMENTAL MICROBIOLOGY (2011)
Integrative genomics viewer
James T. Robinson et al.
NATURE BIOTECHNOLOGY (2011)
Dichloromethane-degrading bacteria in the genomic age
Emilie E. L. Muller et al.
RESEARCH IN MICROBIOLOGY (2011)
Fast and accurate short read alignment with Burrows-Wheeler transform
Heng Li et al.
BIOINFORMATICS (2009)
Methylobacterium Genome Sequences: A Reference Blueprint to Investigate Microbial Metabolism of C1 Compounds from Natural and Industrial Sources
Stephane Vuilleumier et al.
PLOS ONE (2009)
QscR-mediated transcriptional activation of serine cycle genes in Methylobacterium extorquens AM1
MG Kalyuzhnaya et al.
JOURNAL OF BACTERIOLOGY (2005)
Online synonymous codon usage analyses with the ade4 and seqinR packages
D Charif et al.
BIOINFORMATICS (2005)
Promoters and transcripts for genes involved in methanol oxidation in Methylobacterium extorquens AM 1
M Zhang et al.
MICROBIOLOGY-SGM (2003)