相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。Assembling stable syntrophic Escherichia coli communities by comprehensively identifying beneficiaries of secreted goods
Mariana Noto Guillen et al.
CELL SYSTEMS (2021)
Bacterial siderophores in community and host interactions
Jos Kramer et al.
NATURE REVIEWS MICROBIOLOGY (2020)
SciPy 1.0: fundamental algorithms for scientific computing in Python
Pauli Virtanen et al.
NATURE METHODS (2020)
Emergence of Metabolite Provisioning as a By-Product of Evolved Biological Functions
Sebastian Gude et al.
MSYSTEMS (2020)
Array programming with NumPy
Charles R. Harris et al.
NATURE (2020)
Identification of a Novel Cobamide Remodeling Enzyme in the Beneficial Human Gut Bacterium Akkermansia muciniphila
Kenny C. Mok et al.
MBIO (2020)
Public goods and cheating in microbes
Parker Smith et al.
CURRENT BIOLOGY (2019)
Privatization of public goods can cause population decline
Richard J. Lindsay et al.
NATURE ECOLOGY & EVOLUTION (2019)
Discovery of novel bacterial queuine salvage enzymes and pathways in human pathogens
Yifeng Yuan et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2019)
Cofactor Selectivity in Methylmalonyl Coenzyme A Mutase, a Model Cobamide-Dependent Enzyme
Olga M. Sokolovskaya et al.
MBIO (2019)
The public and private benefit of an impure public good determines the sensitivity of bacteria to population collapse in a snowdrift game
Robert P. Smith et al.
ENVIRONMENTAL MICROBIOLOGY (2019)
Uneven distribution of cobamide biosynthesis and dependence in bacteria predicted by comparative genomics
Amanda N. Shelton et al.
ISME JOURNAL (2019)
Costless metabolic secretions as drivers of interspecies interactions in microbial ecosystems
Alan R. Pacheco et al.
NATURE COMMUNICATIONS (2019)
Use of plankton-derived vitamin B1 precursors, especially thiazole-related precursor, by key marine picoeukaryotic phytoplankton
Ryan W. Paerl et al.
ISME JOURNAL (2017)
Siderophore cheating and cheating resistance shape competition for iron in soil and freshwater Pseudomonas communities
Elena Butaite et al.
NATURE COMMUNICATIONS (2017)
Private benefits and metabolic conflicts shape the emergence of microbial interdependencies
Sylvie Estrela et al.
ENVIRONMENTAL MICROBIOLOGY (2016)
Privatization of cooperative benefits stabilizes mutualistic cross-feeding interactions in spatially structured environments
Samay Pande et al.
ISME JOURNAL (2016)
Microbial interactions lead to rapid micro-scale successions on model marine particles
Manoshi S. Datta et al.
NATURE COMMUNICATIONS (2016)
FlowCal: A User-Friendly, Open Source Software Tool for Automatically Converting Flow Cytometry Data from Arbitrary to Calibrated Units
Sebastian M. Castillo-Hair et al.
ACS SYNTHETIC BIOLOGY (2016)
Efflux systems in bacteria and their metabolic engineering applications
Christopher M. Jones et al.
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY (2015)
Characterization of NAD salvage pathways and their role in virulence in Streptococcus pneumoniae
Michael D. L. Johnson et al.
MICROBIOLOGY-SGM (2015)
Anaerobic biosynthesis of the lower ligand of vitamin B12
Amrita B. Hazra et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2015)
Human Gut Microbes Use Multiple Transporters to Distinguish Vitamin B12 Analogs and Compete in the Gut
Patrick H. Degnan et al.
CELL HOST & MICROBE (2014)
Heme uptake in bacterial pathogens
Heidi Contreras et al.
CURRENT OPINION IN CHEMICAL BIOLOGY (2014)
LESS IS MORE: SELECTIVE ADVANTAGES CAN EXPLAIN THE PREVALENT LOSS OF BIOSYNTHETIC GENES IN BACTERIA
Glen D'Souza et al.
EVOLUTION (2014)
Fitness and stability of obligate cross-feeding interactions that emerge upon gene loss in bacteria
Samay Pande et al.
ISME JOURNAL (2014)
Discovery of a SAR11 growth requirement for thiamin's pyrimidine precursor and its distribution in the Sargasso Sea
Paul Carini et al.
ISME JOURNAL (2014)
Syntrophic exchange in synthetic microbial communities
Michael T. Mee et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)
Global metabolic network reorganization by adaptive mutations allows fast growth of Escherichia coli on glycerol
Kian-Kai Cheng et al.
NATURE COMMUNICATIONS (2014)
Cobamide Structure Depends on Both Lower Ligand Availability and CobT Substrate Specificity
Terence S. Crofts et al.
CHEMISTRY & BIOLOGY (2013)
Analysis of Substrate Specificity in CobT Homo logs Reveals Widespread Preference for DMB, the Lower Axial Ligand of Vitamin B12
Amrita B. Hazra et al.
CHEMISTRY & BIOLOGY (2013)
Versatility in Corrinoid Salvaging and Remodeling Pathways Supports Corrinoid-Dependent Metabolism in Dehalococcoides mccartyi
Shan Yi et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2012)
The Black Queen Hypothesis: Evolution of Dependencies through Adaptive Gene Loss
J. Jeffrey Morris et al.
MBIO (2012)
ArsAB, a novel enzyme from Sporomusa ovata activates phenolic bases for adenosylcobamide biosynthesis
Chi Ho Chan et al.
MOLECULAR MICROBIOLOGY (2011)
Regulated proteolysis in Gram-negative bacteria - how and when?
Eyal Gur et al.
NATURE REVIEWS MICROBIOLOGY (2011)
Competitive and cooperative metabolic interactions in bacterial communities
Shiri Freilich et al.
NATURE COMMUNICATIONS (2011)
Sugar transporters in efficient utilization of mixed sugar substrates: current knowledge and outlook
Toru Jojima et al.
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY (2010)
NOVEL COOPERATION EXPERIMENTALLY EVOLVED BETWEEN SPECIES
William Harcombe
EVOLUTION (2010)
The cobinamide amidohydrolase (cobyric acid-forming) CbiZ enzyme: a critical activity of the cobamide remodelling system of Rhodobacter sphaeroides
Michael J. Gray et al.
MOLECULAR MICROBIOLOGY (2009)
Snowdrift game dynamics and facultative cheating in yeast
Jeff Gore et al.
NATURE (2009)
Enzymatic assembly of DNA molecules up to several hundred kilobases
Daniel G. Gibson et al.
NATURE METHODS (2009)
A simple and general explanation for the evolution of altruism
Jeffrey A. Fletcher et al.
PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2009)
One pathway can incorporate either adenine or dimethylbenzimidazole as an α-axial ligand of B12 cofactors in Salmonella enterica
Peter J. Anderson et al.
JOURNAL OF BACTERIOLOGY (2008)
The tragedy of the commons in evolutionary biology
Daniel J. Rankin et al.
TRENDS IN ECOLOGY & EVOLUTION (2007)
Conversion of cobinarnide into adenosylcobamide in bacteria and archaea
Jorge C. Escalante-Semerena
JOURNAL OF BACTERIOLOGY (2007)
Comparative genome sequencing of Escherichia coli allows observation of bacterial evolution on a laboratory timescale
Christopher D. Herring et al.
NATURE GENETICS (2006)
Construction of Escherichia coli K-12 in-frame, single-gene knockout mutants: the Keio collection
Tomoya Baba et al.
MOLECULAR SYSTEMS BIOLOGY (2006)
Bacterial variations on the methionine salvage pathway -: art. no. 9
A Sekowska et al.
BMC MICROBIOLOGY (2004)
Identification of the two missing bacterial genes involved in thiamine salvage: Thiamine pyrophosphokinase and thiamine kinase
J Melnick et al.
JOURNAL OF BACTERIOLOGY (2004)
A proposal for quantifying the recyclability of materials
G Villalba et al.
RESOURCES CONSERVATION AND RECYCLING (2002)
Bacterial amino acid transport proteins: occurrence, functions, and significance for biotechnological applications
A Burkovski et al.
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY (2002)
Commensal interactions in a dual-species biofilm exposed to mixed organic compounds
SE Cowan et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2000)
One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products
KA Datsenko et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2000)
KEGG: Kyoto Encyclopedia of Genes and Genomes
M Kanehisa et al.
NUCLEIC ACIDS RESEARCH (2000)
分享论文
