相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。XFEL Crystal Structures of Peroxidase Compound II
Hanna Kwon et al.
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION (2021)
Aspartate or arginine? Validated redox state X-ray structures elucidate mechanistic subtleties of FeIV = O formation in bacterial dye-decolorizing peroxidases
Marina Lucic et al.
JOURNAL OF BIOLOGICAL INORGANIC CHEMISTRY (2021)
Macromolecular room temperature crystallography
Marcus Fischer
QUARTERLY REVIEWS OF BIOPHYSICS (2021)
pinkIndexer - a universal indexer for pink-beam X-ray and electron diffraction snapshots
Yaroslav Gevorkov et al.
ACTA CRYSTALLOGRAPHICA A-FOUNDATION AND ADVANCES (2020)
What is the structural chemistry of the living organism at its temperature and pressure?
John R. Helliwell
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY (2020)
3D-MiXD: 3D-printed X-ray-compatible microfluidic devices for rapid, low-consumption serial synchrotron crystallography data collection in flow
Diana C. F. Monteiro et al.
IUCRJ (2020)
RADDOSE-XFEL: femtosecond time-resolved dose estimates for macromolecular X-ray free-electron laser experiments
Joshua L. Dickerson et al.
JOURNAL OF APPLIED CRYSTALLOGRAPHY (2020)
Structural dynamics in proteins induced by and probed with X-ray free-electron laser pulses
Karol Nass et al.
NATURE COMMUNICATIONS (2020)
Serial Femtosecond Zero Dose Crystallography Captures a Water-Free Distal Heme Site in a Dye-Decolorising Peroxidase to Reveal a Catalytic Role for an Arginine in FeIV=O Formation
Marina Lucic et al.
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION (2020)
X-ray-induced photoreduction of heme metal centers rapidly induces active-site perturbations in a protein-independent manner
Vera Pfanzagl et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2020)
Dose-resolved serial synchrotron and XFEL structures of radiation-sensitive metalloproteins
Ali Ebrahim et al.
IUCRJ (2019)
Specific radiation damage is a lesser concern at room temperature
Guillaume Gotthard et al.
IUCRJ (2019)
The multifunctional globin dehaloperoxidase strikes again: Simultaneous peroxidase and peroxygenase mechanisms in the oxidation of EPA pollutants
Talita Malewschik et al.
ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS (2019)
Liquid application method for time-resolved analyses by serial synchrotron crystallography
Pedram Mehrabi et al.
NATURE METHODS (2019)
Macromolecular structure determination using X-rays, neutrons and electrons: recent developments in Phenix
Dorothee Liebschner et al.
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY (2019)
Resolution and dose dependence of radiation damage in biomolecular systems
Hakan Atakisi et al.
IUCRJ (2019)
High-throughput structures of protein-ligand complexes at room temperature using serial femtosecond crystallography
Tadeo Moreno-Chicano et al.
IUCRJ (2019)
Resolving polymorphs and radiation-driven effects in microcrystals using fixed-target serial synchrotron crystallography
Ali Ebrahim et al.
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY (2019)
Selective tuning of activity in a multifunctional enzyme as revealed in the F21W mutant of dehaloperoxidase B from Amphitrite ornata
Leiah M. Carey et al.
JOURNAL OF BIOLOGICAL INORGANIC CHEMISTRY (2018)
Estimate your dose: RADDOSE-3D
Charles S. Bury et al.
PROTEIN SCIENCE (2018)
MolProbity: More and better reference data for improved all-atom structure validation
Christopher J. Williams et al.
PROTEIN SCIENCE (2018)
The Nature and Reactivity of Ferryl Heme in Compounds I and II
Peter C. E. Moody et al.
ACCOUNTS OF CHEMICAL RESEARCH (2018)
Peroxidase versus Peroxygenase Activity: Substrate Substituent Effects as Modulators of Enzyme Function in the Multifunctional Catalytic Globin Dehaloperoxidase
Ashlyn H. McGuire et al.
BIOCHEMISTRY (2018)
An expanded allosteric network in PTP1B by multitemperature crystallography, fragment screening, and covalent tethering
Daniel A. Keedy et al.
ELIFE (2018)
Effects of protein-crystal hydration and temperature on side-chain conformational heterogeneity in monoclinic lysozyme crystals
Hakan Atakisi et al.
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY (2018)
IMAGINE: neutrons reveal enzyme chemistry
Gabriela C. Schroder et al.
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY (2018)
DIALS: implementation and evaluation of a new integration package
Graeme Winter et al.
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY (2018)
The hit-and-return system enables efficient time-resolved serial synchrotron crystallography
Eike C. Schulz et al.
NATURE METHODS (2018)
Crystallography on a chip - without the chip: sheet-on-sheet sandwich
R. Bruce Doak et al.
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY (2018)
Room Temperature Neutron Crystallography of Drug Resistant HIV-1 Protease Uncovers Limitations of X-ray Structural Analysis at 100 K
Oksana Gerlits et al.
JOURNAL OF MEDICINAL CHEMISTRY (2017)
Pink-beam serial crystallography
A. Meents et al.
NATURE COMMUNICATIONS (2017)
Oxidation of pyrrole by dehaloperoxidase-hemoglobin: chemoenzymatic synthesis of pyrrolin-2-ones
Nikolette L. McCombs et al.
CATALYSIS SCIENCE & TECHNOLOGY (2017)
An extended N-H bond, driven by a conserved second-order interaction, orients the flavin N5 orbital in cholesterol oxidase
Emily Golden et al.
SCIENTIFIC REPORTS (2017)
Combining X-ray and neutron crystallography with spectroscopy
Hanna Kwon et al.
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY (2017)
Low-dose fixed-target serial synchrotron crystallography
Robin L. Owen et al.
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY (2017)
Crystallization of a fungal lytic polysaccharide monooxygenase expressed from glycoengineered Pichia pastoris for X-ray and neutron diffraction
William B. O'Dell et al.
ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS (2017)
Conformational variation of proteins at room temperature is not dominated by radiation damage
Silvia Russi et al.
JOURNAL OF SYNCHROTRON RADIATION (2017)
Interaction of Azole-Based Environmental Pollutants with the Coelomic Hemoglobin from Amphitrite ornata: A Molecular Basis for Toxicity
Nikolette L. McCombs et al.
BIOCHEMISTRY (2017)
Neutron protein crystallography: A complementary tool for locating hydrogens in proteins
William B. O'Dell et al.
ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS (2016)
Nonmicrobial Nitrophenol Degradation via Peroxygenase Activity of Dehaloperoxidase-Hemoglobin from Amphitrite ornata
Nikolette L. McCombs et al.
BIOCHEMISTRY (2016)
Crystal structure of the pristine peroxidase ferryl center and its relevance to proton-coupled electron transfer
Georges Chreifi et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2016)
Direct visualization of a Fe(IV)-OH intermediate in a heme enzyme
Hanna Kwon et al.
NATURE COMMUNICATIONS (2016)
Advances in X-ray free electron laser (XFEL) diffraction data processing applied to the crystal structure of the synaptotagmin-1 / SNARE complex
Artem Y. Lyubimov et al.
ELIFE (2016)
Fixed target combined with spectral mapping: approaching 100% hit rates for serial crystallography
Saeed Oghbaey et al.
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY (2016)
Recent developments in CrystFEL
Thomas A. White et al.
JOURNAL OF APPLIED CRYSTALLOGRAPHY (2016)
One Crystal, Two Temperatures: Cryocooling Penalties Alter Ligand Binding to Transient Protein Sites
Marcus Fischer et al.
CHEMBIOCHEM (2015)
Neutron Crystal Structure of RAS GTPase Puts in Question the Protonation State of the GTP γ-Phosphate
Ryan Knihtila et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2015)
Serial femtosecond crystallography: the first five years
Ilme Schlichting
IUCRJ (2015)
Online_DPI: a web server to calculate the diffraction precision index for a protein structure
K. S. Dinesh Kumar et al.
JOURNAL OF APPLIED CRYSTALLOGRAPHY (2015)
A modular and compact portable mini-endstation for high-precision, high-speed fixed target serial crystallography at FEL and synchrotron sources
Darren A. Sherrell et al.
JOURNAL OF SYNCHROTRON RADIATION (2015)
Influence of heme environment structure on dioxygen affinity for the dual function Amphitrite ornata hemoglobin/dehaloperoxidase. Insights into the evolutional structure-function adaptations
Shengfang Sun et al.
ARCHIVES OF BIOCHEMISTRY AND BIOPHYSICS (2014)
Peroxygenase and Oxidase Activities of Dehaloperoxidase-Hemoglobin from Amphitrite ornata
David A. Barrios et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2014)
Development of an X-ray pixel detector with multi-port charge-coupled device for X-ray free-electron laser experiments
Takashi Kameshima et al.
REVIEW OF SCIENTIFIC INSTRUMENTS (2014)
Neutron cryo-crystallography captures the protonation state of ferryl heme in a peroxidase
Cecilia M. Casadei et al.
SCIENCE (2014)
Fingerprinting redox and ligand states in haemprotein crystal structures using resonance Raman spectroscopy
Demet Kekilli et al.
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY (2014)
Room-temperature macromolecular serial crystallography using synchrotron radiation
Francesco Stellato et al.
IUCRJ (2014)
Cheetah: software for high-throughput reduction and analysis of serial femtosecond X-ray diffraction data
Anton Barty et al.
JOURNAL OF APPLIED CRYSTALLOGRAPHY (2014)
The IMAGINE instrument: first neutron protein structure and new capabilities for neutron macromolecular crystallography
Flora Meilleur et al.
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY (2013)
Crystallographic data processing for free-electron laser sources
Thomas A. White et al.
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY (2013)
Advances, Interactions, and Future Developments in the CNS, Phenix, and Rosetta Structural Biology Software Systems
Paul D. Adams et al.
ANNUAL REVIEW OF BIOPHYSICS, VOL 42 (2013)
The role of T56 in controlling the flexibility of the distal histidine in dehaloperoxidase-hemoglobin from Amphitrite ornata
Shu Jiang et al.
BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS (2013)
Joint X-ray/Neutron Crystallographic Study of HIV-1 Protease with Clinical Inhibitor Amprenavir: Insights for Drug Design
Irene T. Weber et al.
JOURNAL OF MEDICINAL CHEMISTRY (2013)
The dehaloperoxidase paradox
Stefan Franzen et al.
BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS (2012)
REFMAC5 for the refinement of macromolecular crystal structures
Garib N. Murshudov et al.
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY (2011)
Presenting your structures: the CCP4mg molecular-graphics software
S. McNicholas et al.
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY (2011)
Reactivity of Deoxy- and Oxyferrous Dehaloperoxidase B from Amphitrite ornata: Identification of Compound II and Its Ferrous-Hydroperoxide Precursor
Jennifer D'Antonio et al.
BIOCHEMISTRY (2011)
Structure of dehaloperoxidase B at 1.58 Å resolution and structural characterization of the AB dimer from Amphitrite ornata
Vesna de Serrano et al.
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY (2010)
Temperature-dependent macromolecular X-ray crystallography
Martin Weik et al.
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY (2010)
Features and development of Coot
P. Emsley et al.
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY (2010)
Spectroscopic and Mechanistic Investigations of Dehaloperoxidase B from Amphitrite ornata
Jennifer D'Antonio et al.
BIOCHEMISTRY (2010)
Crystallographic and Single-Crystal Spectral Analysis of the Peroxidase Ferryl Intermediate
Yergalem T. Meharenna et al.
BIOCHEMISTRY (2010)
Measuring Binding Affinity of Protein-Ligand Interaction Using Spectrophotometry: Binding of Neutral Red to Riboflavin-Binding Protein
Pirom Chenprakhon et al.
JOURNAL OF CHEMICAL EDUCATION (2010)
Compound ES of Dehaloperoxidase Decays via Two Alternative Pathways Depending on the Conformation of the Distal Histidine
Matthew K. Thompson et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2010)
Characterization of Dehaloperoxidase Compound ES and Its Reactivity with Trihalophenols
Jeremiah Feducia et al.
BIOCHEMISTRY (2009)
A beginner's guide to radiation damage
James M. Holton
JOURNAL OF SYNCHROTRON RADIATION (2009)
Engineering ascorbate peroxidase activity into cytochrome c peroxidase
Yergalem T. Meharenna et al.
BIOCHEMISTRY (2008)
Observation of decreased radiation damage at higher dose rates in room temperature protein crystallography
Robert J. Southworth-Davies et al.
STRUCTURE (2007)
X-ray crystal structural analysis of the binding site in the ferric and oxyferrous forms of the recombinant heme dehaloperoxidase cloned from Amphitrite ornata
Vesna de Serrano et al.
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY (2007)
Cryoradiolytic reduction of crystalline heme proteins:: analysis by UV-Vis spectroscopy and X-ray crystallography
Thorsten Beitlich et al.
JOURNAL OF SYNCHROTRON RADIATION (2007)
HKL-3000:: the integration of data reduction and structure solution -: from diffraction images to an initial model in minutes
Wladek Minor et al.
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY (2006)
Scaling and assessment of data quality
P Evans
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY (2006)
The crystal structure of a tetrameric hemoglobin in a partial hemichrome state
A Riccio et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2002)
Potential for biomolecular imaging with femtosecond X-ray pulses
R Neutze et al.
NATURE (2000)
分享论文
