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Andrew Rambaut et al.
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A permutation approach for inferring species networks from gene trees in polyploid complexes by minimising deep coalescences
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Andrew A. Crowl et al.
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Salvatore Tomasello et al.
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Kamil Konowalik et al.
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Kevin Vanneste et al.
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Fredrik Ronquist et al.
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Bayesian semi-supervised classification of bacterial samples using MLST databases
Lu Cheng et al.
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A next-generation sequencing method for overcoming the multiple gene copy problem in polyploid phylogenetics, applied to Poa grasses
Philippa C. Griffin et al.
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Ancestral polyploidy in seed plants and angiosperms
Yuannian Jiao et al.
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Galaxy: a comprehensive approach for supporting accessible, reproducible, and transparent computational research in the life sciences
Jeremy Goecks et al.
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Inferring polyploid phylogenies from multiply-labeled gene trees
Martin Lott et al.
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The polyploid series of Centaurea toletana: Glacial migrations and introgression revealed by nrDNA and cpDNA sequence analyzes
Nuria Garcia-Jacas et al.
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The frequency of polyploid speciation in vascular plants
Troy E. Wood et al.
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PhyloNet: a software package for analyzing and reconstructing reticulate evolutionary relationships
Cuong Than et al.
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Enhanced Bayesian modelling in BAPS software for learning genetic structures of populations
Jukka Corander et al.
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Recent developments in the MAFFT multiple sequence alignment program
Kazutaka Katoh et al.
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CHAMPURU 1.0: a computer software for unraveling mixtures of two DNA sequences of unequal lengths
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Mark A. Chapman et al.
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Douglas E. Soltis et al.
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Phase determination from direct sequencing of length-variable DNA regions
Jean-Francois Flot et al.
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S Joly et al.
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Application of phylogenetic networks in evolutionary studies
DH Huson et al.
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Phylogenetic patterns and polyploid evolution within the Mediterranean genus Centaurium (Gentianaceae-Chironieae)
G Mansion et al.
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B Giardine et al.
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LE Lisiecki et al.
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C Lee et al.
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GapCoder automates the use of indel characters in phylogenetic analysis
ND Young et al.
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MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform
K Katoh et al.
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