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Ehsan Raoufi et al.
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Zulkar Nain et al.
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Rida Sajjad et al.
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Saba Ismail et al.
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Sajjad Ahmad et al.
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Manuela Canica et al.
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R. Craig MacLean et al.
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Randi Vita et al.
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Robert Adamu Shey et al.
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Eva M. Kulik et al.
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Vandana Solanki et al.
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Shaili Johri et al.
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Massoud Saidijam et al.
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Reaz Uddin et al.
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Amandine Gagneux-Brunon et al.
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Abdul Wadood et al.
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Emergence of dominant multidrug-resistant bacterial clades: Lessons from history and whole-genome sequencing
Elizabeth J. Klemm et al.
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David E. Bloom et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2018)
Database Resources of the National Center for Biotechnology
Richa Agarwala et al.
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Muhammad Ibrahim Rashid et al.
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Arun Kumar Jaiswal et al.
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Martin Closter Jespersen et al.
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Shehneela Baseer et al.
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Gul Sanober et al.
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Max Hebditch et al.
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Muhammad Rizwan et al.
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Afreenish Hassan et al.
BMC GENOMICS (2016)
TLR2 and TLR4 mediated host immune responses in major infectious diseases: a review
Suprabhat Mukherjee et al.
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Navid Nezafat et al.
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Mariusz Skwarczynski et al.
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Sohaila Andleeb et al.
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Florence Carrouel et al.
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Narendrakumar M. Chaudhari et al.
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Anam Naz et al.
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Luca Bruno et al.
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Amjad Ali et al.
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Benjamin D. Brooks et al.
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Alan A. Dombkowski et al.
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Syed Sikander Azam et al.
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Ivan Dimitrov et al.
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L. Evan Reddick et al.
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History of vaccination
Stanley Plotkin
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Examining Electrostatic Influences on Base-Flipping: A Comparison of TIP3P and GB Solvent Models
Allyn R. Brice et al.
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PTRAJ and CPPTRAJ: Software for Processing and Analysis of Molecular Dynamics Trajectory Data
Daniel R. Roe et al.
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Lim Heo et al.
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Exoproteome and Secretome Derived Broad Spectrum Novel Drug and Vaccine Candidates in Vibrio cholerae Targeted by Piper betel Derived Compounds
Debmalya Barh et al.
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Limin Fu et al.
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Azeem Mehmood Butt et al.
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Bill R. Miller et al.
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Nancy Y. Yu et al.
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Nicolas Rapin et al.
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Nelly Andrusier et al.
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M. Lombard et al.
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Irini A. Doytchinova et al.
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JY Lee et al.
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Galaxy: A platform for interactive large-scale genome analysis
B Giardine et al.
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PatchDock and SymmDock: servers for rigid and symmetric docking
D Schneidman-Duhovny et al.
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JCat:: a novel tool to adapt codon usage of a target gene to its potential expression host
A Grote et al.
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SCRATCH: a protein structure and structural feature prediction server
J Cheng et al.
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DEG: a database of essential genes
R Zhang et al.
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UCSF chimera - A visualization system for exploratory research and analysis
EF Pettersen et al.
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YJ Chen et al.
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FC Gibson et al.
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BC Ross et al.
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