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Gwladys Sevrin et al.
GUT MICROBES (2020)
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Matthew T. Sorbara et al.
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BacDive in 2019: bacterial phenotypic data for High-throughput biodiversity analysis
Lorenz Christian Reimer et al.
NUCLEIC ACIDS RESEARCH (2019)
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Katharine Z. Coyte et al.
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Jyoti Madhusoodanan
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Confirmed and Potential Roles of Bacterial T6SSs in the Intestinal Ecosystem
Can Chen et al.
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Enforcement is central to the evolution of cooperation
J. Arvid Agren et al.
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Role of flagellar hydrogen bonding in Salmonella motility and flagellar polymorphic transition
Chu Wang et al.
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The role of multilevel selection in host microbiome evolution
Simon van Vliet et al.
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Analysis of substitution rates showed that TLR5 is evolving at different rates among mammalian groups
Ana Pinheiro et al.
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Hao Q. Tran et al.
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Akinobu Kajikawa et al.
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Datamonkey 2.0: A Modern Web Application for Characterizing Selective and Other Evolutionary Processes
Steven Weaver et al.
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Toll-Like Receptor Evolution in Birds: Gene Duplication, Pseudogenization, and Diversifying Selection
Hana Velova et al.
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Neonatal selection by Toll-like receptor 5 influences long-term gut microbiota composition
Marcus Fulde et al.
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Bacterial antagonism in host-associated microbial communities
Leonor Garcia-Bayona et al.
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Colonocyte metabolism shapes the gut microbiota
Yael Litvak et al.
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Seul Huitzil et al.
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Implications of butyrate and its derivatives for gut health and animal production
Andrea Bedford et al.
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Mechanisms of inflammation-driven bacterial dysbiosis in the gut
M. Y. Zeng et al.
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Improvements to PATRIC, the all-bacterial Bioinformatics Database and Analysis Resource Center
Alice R. Wattam et al.
NUCLEIC ACIDS RESEARCH (2017)
The evolution of the host microbiome as an ecosystem on a leash
Kevin R. Foster et al.
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Angela M. Patterson et al.
FRONTIERS IN IMMUNOLOGY (2017)
Phylogenic inference using alignment-free methods for applications in microbial community surveys using 16s rRNA gene
Yifei Zhang et al.
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A conserved TLR5 binding and activation hot spot on flagellin
Wan Seok Song et al.
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Adrian J. Verster et al.
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Bacterial flagellin-a potent immunomodulatory agent
Irshad A. Hajam et al.
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Host Selection of Microbiota via Differential Adhesion
Kirstie McLoughlin et al.
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Angela E. Douglas et al.
mBio (2016)
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Swadha Anand et al.
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Carlos G. P. Voogdt et al.
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Physiologic hypoxia and oxygen homeostasis in the healthy intestine. A Review in the Theme: Cellular Responses to Hypoxia
Leon Zheng et al.
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Motility in the epsilon-proteobacteria
Morgan Beeby
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Tal Korem et al.
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T. W. Cullen et al.
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Host Biology in Light of the Microbiome: Ten Principles of Holobionts and Hologenomes
Seth R. Bordenstein et al.
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Sebastian Fraune et al.
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Wayne P. Maddison et al.
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Anna Hanuszkiewicz et al.
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Pseudomonas syringae Evades Host Immunity by Degrading Flagellin Monomers with Alkaline Protease AprA
Michiel J. C. Pel et al.
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Sophie S. Abby et al.
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Sara Mitri et al.
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John Elmerdahl Olsen et al.
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Tyler C. Cullender et al.
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Nicholas Arpaia et al.
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Nicholas Arpaia et al.
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B. Anne Neville et al.
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Sarah A. Smith et al.
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Microbial life in the phyllosphere
Julia A. Vorholt
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Soeren Franzenburg et al.
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Lora V. Hooper et al.
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Jonas Schluter et al.
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Ben Murrell et al.
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Helena Areal et al.
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Fast, scalable generation of high-quality protein multiple sequence alignments using Clustal Omega
Fabian Sievers et al.
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Pseudomonas Evades Immune Recognition of Flagellin in Both Mammals and Plants
Bart W. Bardoel et al.
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Reconstitution of a Functional Toll-like Receptor 5 Binding Site in Campylobacter jejuni Flagellin
Marcel R. de Zoete et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2010)
Adaptation and Constraint at Toll-Like Receptors in Primates
Gabriela Wlasiuk et al.
MOLECULAR BIOLOGY AND EVOLUTION (2010)
FastTree 2-Approximately Maximum-Likelihood Trees for Large Alignments
Morgan N. Price et al.
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John M. McNamara et al.
PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2010)
Cooperation as a volunteer's dilemma and the strategy of conflict in public goods games
M. Archetti
JOURNAL OF EVOLUTIONARY BIOLOGY (2009)
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Gabriela Wlasiuk et al.
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Decreased potency of the Vibrio cholerae sheathed flagellum to trigger host innate immunity
Sang Sun Yoon et al.
INFECTION AND IMMUNITY (2008)
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A. Marijke Keestra et al.
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Lymphoid tissue genesis induced by commensals through NOD1 regulates intestinal homeostasis
Djahida Bouskra et al.
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Bacterial imprinting of the neonatal immune system:: Lessons from maternal cells?
Pablo F. Perez et al.
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Cheating can stabilize cooperation in mutualisms
Kevin R. Foster et al.
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A general model for the evolution of mutualisms
K. R. Foster et al.
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Dominant-negative TLR5 polymorphism reduces adaptive immune response to flagellin and negatively associates with Crohn's disease
AT Gewirtz et al.
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Bayesian analysis of correlated evolution of discrete characters by reversible-jump Markov chain Monte Carlo
Mark Pagel et al.
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Postnatal acquisition of endotoxin tolerance in intestinal epithelial cells
M Lotz et al.
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Pathogen recognition and innate immunity
S Akira et al.
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SIMMAP: Stochastic character mapping of discrete traits on phylogenies
JP Bollback
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TR Hawn et al.
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Evasion of Toll-like receptor 5 by flagellated bacteria
E Andersen-Nissen et al.
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SS Way et al.
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KR Foster
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S Rakoff-Nahoum et al.
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TJJ Inglis et al.
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