Novel Bacteriophage Specific against Staphylococcus epidermidis and with Antibiofilm Activity

Article Multidisciplinary Sciences

Multi-species host range of staphylococcal phages isolated from wastewater

Pauline C. Goeller et al.

Summary: The study reveals that staphylococcal phages have a predominant multi-species host range, facilitating horizontal gene transfer. Additionally, there is potential for antibiotic resistance gene transfer among phages sharing common hosts.

NATURE COMMUNICATIONS (2021)

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Review Infectious Diseases

Bacteriophage-Derived Depolymerases against Bacterial Biofilm

Gracja Topka-Bielecka et al.

Summary: The formation of bacterial biofilm complicates eradication efforts due to issues with drug penetration, impaired host immunity, and accumulation of bioactive compounds. Phage-derived depolymerases show potential in combating biofilm-forming bacteria, but may not completely eradicate all bacterial cells. Combined therapy using depolymerases with antibiotics or other agents could be an effective approach against biofilm-related infections.

ANTIBIOTICS-BASEL (2021)

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Article Immunology

Fighting Staphylococcus epidermidis Biofilm-Associated Infections: Can Iron Be the Key to Success?

Fernando Oliveira et al.

Summary: Staphylococcus epidermidis is an important commensal microorganism on human skin and mucosae, yet it can also cause severe infections in immunocompromised patients. Its ability to form biofilms makes infections difficult to treat. Research suggests that the bacterium's dependence on iron plays a key role in its pathogenicity.

FRONTIERS IN CELLULAR AND INFECTION MICROBIOLOGY (2021)

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Article Multidisciplinary Sciences

A catalog of tens of thousands of viruses from human metagenomes reveals hidden associations with chronic diseases

Michael J. Tisza et al.

Summary: Despite the challenges, this study reveals over 45,000 unique virus taxa sequences from thousands of datasets, with historically high per-genome completeness. By reanalyzing large publicly available case-control studies, over 2,200 strong virus-disease associations are found.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2021)

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Review Biochemistry & Molecular Biology

A combination therapy of Phages and Antibiotics: Two is better than one

Xianghui Li et al.

Summary: The emergence of antibiotic resistance is a major challenge for global health, leading to an urgent need for alternative therapeutic strategies due to a shortage of antibiotic pipelines. Phage-antibiotic synergy (PAS) has emerged as a promising approach to combat antibiotic-resistant pathogens, by enhancing bacterial killing and reducing the development of antibiotic resistance through a combination of phages and antibiotics. Additionally, the genetic and molecular mechanisms of phage antibiotic synergy, as well as the potential of engineered phages in reducing bacterial pathogenicity, are addressed in this review.

INTERNATIONAL JOURNAL OF BIOLOGICAL SCIENCES (2021)

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Article Infectious Diseases

Bacteriophage-antibiotic combinations against ciprofloxacin/ceftriaxone-resistant Escherichia coli in vitro and in an experimental Galleria mellonella model

Lei Wang et al.

INTERNATIONAL JOURNAL OF ANTIMICROBIAL AGENTS (2020)

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Article Virology

VIRIDIC-A Novel Tool to Calculate the Intergenomic Similarities of Prokaryote-Infecting Viruses

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VIRUSES-BASEL (2020)

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BACTERIOPHAGE THERAPY AS A TREATMENT STRATEGY FOR ORTHOPAEDIC-DEVICE-RELATED INFECTIONS: WHERE DO WE STAND?

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EUROPEAN CELLS & MATERIALS (2020)

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Article Microbiology

Distinct Phenotypic and Genomic Signatures Underlie Contrasting Pathogenic Potential of Staphylococcus epidermidis Clonal Lineages

Diana Espadinha et al.

FRONTIERS IN MICROBIOLOGY (2019)

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Article Microbiology

Effect of bacterial growth rate on bacteriophage population growth rate

Dominik Nabergoj et al.

MICROBIOLOGYOPEN (2018)

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HMMER web server: 2018 update

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NUCLEIC ACIDS RESEARCH (2018)

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Real-time assessment of bacteriophage T3-derived antimicrobial activity against planktonic and biofilm-embedded Escherichia coli by isothermal microcalorimetry

Tamta Tkhilaishvili et al.

RESEARCH IN MICROBIOLOGY (2018)

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Article Multidisciplinary Sciences

Isolation, characterization and in vivo efficacy of Escherichia phage myPSH1131

Prasanth Manohar et al.

PLOS ONE (2018)

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Article Microbiology

Analysis of Different Parameters Affecting Diffusion, Propagation and Survival of Staphylophages in Bacterial Biofilms

Silvia Gonzalez et al.

FRONTIERS IN MICROBIOLOGY (2018)

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Article Microbiology

Global spread of three multidrug-resistant lineages of Staphylococcus epidermidis

Jean Y. H. Lee et al.

NATURE MICROBIOLOGY (2018)

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Improvements to PATRIC, the all-bacterial Bioinformatics Database and Analysis Resource Center

Alice R. Wattam et al.

NUCLEIC ACIDS RESEARCH (2017)

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Article Biochemical Research Methods

Unicycler: Resolving bacterial genome assemblies from short and long sequencing reads

Ryan R. Wick et al.

PLOS COMPUTATIONAL BIOLOGY (2017)

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Article Multidisciplinary Sciences

PhageTerm: a tool for fast and accurate determination of phage termini and packaging mechanism using next-generation sequencing data

Julian R. Garneau et al.

SCIENTIFIC REPORTS (2017)

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Article Biochemical Research Methods

ViPTree: the viral proteomic tree server

Yosuke Nishimura et al.

BIOINFORMATICS (2017)

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Article Biotechnology & Applied Microbiology

Software-based analysis of bacteriophage genomes, physical ends, and packaging strategies

Bryan D. Merrill et al.

BMC GENOMICS (2016)

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Article Microbiology

SLPW: A Virulent Bacteriophage Targeting Methicillin-Resistant Staphylococcus aureus In vitro and In vivo

Zhaofei Wang et al.

FRONTIERS IN MICROBIOLOGY (2016)

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Article Biotechnology & Applied Microbiology

Two Phages, phiIPLA-RODI and phiIPLA-C1C, Lyse Mono- and Dual-Species Staphylococcal Biofilms

Diana Gutierrez et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2015)

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Article Biochemical Research Methods

The Phyre2 web portal for protein modeling, prediction and analysis

Lawrence A. Kelley et al.

NATURE PROTOCOLS (2015)

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RASTtk: A modular and extensible implementation of the RAST algorithm for building custom annotation pipelines and annotating batches of genomes

Thomas Brettin et al.

SCIENTIFIC REPORTS (2015)

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Review Dentistry, Oral Surgery & Medicine

Strategies for combating bacterial biofilm infections

Hong Wu et al.

INTERNATIONAL JOURNAL OF ORAL SCIENCE (2015)

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Real-Time Whole-Genome Sequencing for Routine Typing, Surveillance, and Outbreak Detection of Verotoxigenic Escherichia coli

Katrine Grimstrup Joensen et al.

JOURNAL OF CLINICAL MICROBIOLOGY (2014)

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Article Biotechnology & Applied Microbiology

Isolation and characterization of a new Staphylococcus epidermidis broad-spectrum bacteriophage

Luis D. R. Melo et al.

JOURNAL OF GENERAL VIROLOGY (2014)

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Characterization of Staphylococcus epidermidis phage vB_SepS_SEP9-a unique member of the Siphoviridae family

Luis D. R. Melo et al.

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Review Virology

Understanding Bacteriophage Specificity in Natural Microbial Communities

Britt Koskella et al.

VIRUSES-BASEL (2013)

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Genomic characterization of two Staphylococcus epidermidis bacteriophages with anti-biofilm potential

Diana Gutierrez et al.

BMC GENOMICS (2012)

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NIH Image to ImageJ: 25 years of image analysis

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Easyfig: a genome comparison visualizer

Mitchell J. Sullivan et al.

BIOINFORMATICS (2011)

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Isolation and characterization of lytic bacteriophages against enterohaemorrhagic Escherichia coli

S. Viazis et al.

JOURNAL OF APPLIED MICROBIOLOGY (2011)

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Article Microbiology

Isolation and Characterization of Bacteriophages Infecting Staphylococcus epidermidis

Diana Gutierrez et al.

CURRENT MICROBIOLOGY (2010)

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Review Microbiology

Staphylococcus epidermidis - the 'accidental' pathogen

Michael Otto

NATURE REVIEWS MICROBIOLOGY (2009)

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Review Microbiology

The interaction of phage and biofilms

IW Sutherland et al.

FEMS MICROBIOLOGY LETTERS (2004)

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Novel Bacteriophage Specific against Staphylococcus epidermidis and with Antibiofilm Activity

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