相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。Ecology, evolution and spillover of coronaviruses from bats
Manuel Ruiz-Aravena et al.
NATURE REVIEWS MICROBIOLOGY (2022)
Novel Canine Coronavirus Isolated from a Hospitalized Patient With Pneumonia in East Malaysia
Anastasia N. Vlasova et al.
CLINICAL INFECTIOUS DISEASES (2022)
A Novel International Monkeypox Outbreak
Amesh Adalja et al.
ANNALS OF INTERNAL MEDICINE (2022)
Climate change increases cross-species viral transmission risk
Colin J. Carlson et al.
NATURE (2022)
Evolutionary History of Endogenous Human Herpesvirus 6 Reflects Human Migration out of Africa
Amr Aswad et al.
MOLECULAR BIOLOGY AND EVOLUTION (2021)
Independent infections of porcine deltacoronavirus among Haitian children
John A. Lednicky et al.
NATURE (2021)
Genomic-informed pathogen surveillance in Africa: opportunities and challenges
Seth C. Inzaule et al.
LANCET INFECTIOUS DISEASES (2021)
Ten millennia of hepatitis B virus evolution
Arthur Kocher et al.
SCIENCE (2021)
Climate predicts geographic and temporal variation in mosquito-borne disease dynamics on two continents
Jamie M. Caldwell et al.
NATURE COMMUNICATIONS (2021)
Evidence for SARS-CoV-2 related coronaviruses circulating in bats and pangolins in Southeast Asia
Supaporn Wacharapluesadee et al.
NATURE COMMUNICATIONS (2021)
Interspecies Jumping of Bat Coronaviruses
Antonio C. P. Wong et al.
VIRUSES-BASEL (2021)
Identifying and prioritizing potential human-infecting viruses from their genome sequences
Nardus Mollentze et al.
PLOS BIOLOGY (2021)
Genome of Pesxtera Muierii skull shows high diversity and low mutational load in pre-glacial Europe
Emma Svensson et al.
CURRENT BIOLOGY (2021)
Discovery of Novel Herpes Simplexviruses in Wild Gorillas, Bonobos, and Chimpanzees Supports Zoonotic Origin of HSV-2
Joel O. Wertheim et al.
MOLECULAR BIOLOGY AND EVOLUTION (2021)
Ebola Virus Transmission Initiated by Relapse of Systemic Ebola Virus Disease
Placide Mbala-Kingebeni et al.
NEW ENGLAND JOURNAL OF MEDICINE (2021)
Identification of novel bat coronaviruses sheds light on the evolutionary origins of SARS-CoV-2 and related viruses
Hong Zhou et al.
CELL (2021)
The origins of SARS-CoV-2: A critical review
Edward C. Holmes et al.
CELL (2021)
Variola virus DNA in skeletal remains, 17th to 18th centuries, southeastern France
Avril Meffray et al.
CLINICAL MICROBIOLOGY AND INFECTION (2021)
An ancient viral epidemic involving host coronavirus interacting genes more than 20,000 years ago in East Asia
Yassine Souilmi et al.
CURRENT BIOLOGY (2021)
A mechanistic evolutionary model explains the time-dependent pattern of substitution rates in viruses
Mahan Ghafari et al.
CURRENT BIOLOGY (2021)
Science, not speculation, is essential to determine how SARS-CoV-2 reached humans
Charles H. Calisher et al.
LANCET (2021)
Resurgence of Ebola virus in 2021 in Guinea suggests a new paradigm for outbreaks
Alpha Kabinet Keita et al.
NATURE (2021)
Genomic history of human monkey pox infections in the Central African Republic between 2001 and 2018
Nicolas Berthet et al.
SCIENTIFIC REPORTS (2021)
Ancient viral genomes reveal introduction of human pathogenic viruses into Mexico during the transatlantic slave trade
Axel A. Guzman-Solis et al.
ELIFE (2021)
Intrahost speciations and host switches played an important role in the evolution of herpesviruses
Anderson F. Brito et al.
VIRUS EVOLUTION (2021)
You Will Never Walk Alone: Codispersal of JC Polyomavirus with Human Populations
Diego Forni et al.
MOLECULAR BIOLOGY AND EVOLUTION (2020)
Long-term evolution of hepatitis B virus genotype F: Strong association between viral diversification and the prehistoric settlement of Central and South America
Laura Mojsiejczuk et al.
JOURNAL OF VIRAL HEPATITIS (2020)
Recent Out-of-Africa Migration of Human Herpes Simplex Viruses
Diego Forni et al.
MOLECULAR BIOLOGY AND EVOLUTION (2020)
Accounting for population structure reveals ambiguity in the Zaire Ebolavirus reservoir dynamics
Bram Vrancken et al.
PLOS NEGLECTED TROPICAL DISEASES (2020)
Forty years with coronaviruses
Susan R. Weiss
JOURNAL OF EXPERIMENTAL MEDICINE (2020)
Systematics, Ecology, and Host Switching: Attributes Affecting Emergence of the Lassa Virus in Rodents across Western Africa
Ayodeji Olayemi et al.
VIRUSES-BASEL (2020)
Monkeypox virus emergence in wild chimpanzees reveals distinct clinical outcomes and viral diversity
Livia V. Patrono et al.
NATURE MICROBIOLOGY (2020)
The continued threat of emerging flaviviruses
Theodore C. Pierson et al.
NATURE MICROBIOLOGY (2020)
The proximal origin of SARS-CoV-2
Kristian G. Andersen et al.
NATURE MEDICINE (2020)
Evidence of human occupation in Mexico around the Last Glacial Maximum
Ciprian F. Ardelean et al.
NATURE (2020)
The timing and effect of the earliest human arrivals in North America
Lorena Becerra-Valdivia et al.
NATURE (2020)
The Recovery, Interpretation and Use of Ancient Pathogen Genomes
Sebastian Duchene et al.
CURRENT BIOLOGY (2020)
Measles virus and rinderpest virus divergence dated to the sixth century BCE
Ariane Duex et al.
SCIENCE (2020)
Variola virus genome sequenced from an eighteenth-century museum specimen supports the recent origin of smallpox
Giada Ferrari et al.
PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2020)
Origin and cross-species transmission of bat coronaviruses in China
Alice Latinne et al.
NATURE COMMUNICATIONS (2020)
Diverse variola virus (smallpox) strains were widespread in northern Europe in the Viking Age
Barbara Muehlemann et al.
SCIENCE (2020)
Six Impossible Things before Breakfast:Assumptions, Models, and Belief in Molecular Dating
Lindell Bromham
TRENDS IN ECOLOGY & EVOLUTION (2019)
Arenavirus genomics: novel insights into viral diversity, origin, and evolution
Chiara Pontremoli et al.
CURRENT OPINION IN VIROLOGY (2019)
Bayesian Inference of Evolutionary Histories under Time-Dependent Substitution Rates
Jade Vincent Membrebe et al.
MOLECULAR BIOLOGY AND EVOLUTION (2019)
Ancient pathogen genomics as an emerging tool for infectious disease research
Maria A. Spyrou et al.
NATURE REVIEWS GENETICS (2019)
Novel Bat Alphacoronaviruses in Southern China Support Chinese Horseshoe Bats as an Important Reservoir for Potential Novel Coronaviruses
Susanna K. P. Lau et al.
VIRUSES-BASEL (2019)
How host genetics dictates successful viral zoonosis
Cody J. Warren et al.
PLOS BIOLOGY (2019)
Using hominin introgression to trace modern human dispersals
Joao C. Teixeira et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2019)
Outbreak of human monkeypox in Nigeria in 2017-18: a clinical and epidemiological report
Adesola Yinka-Ogunleye et al.
LANCET INFECTIOUS DISEASES (2019)
Prisoners of war - host adaptation and its constraints on virus evolution
Peter Simmonds et al.
NATURE REVIEWS MICROBIOLOGY (2019)
Origin and evolution of pathogenic coronaviruses
Jie Cui et al.
NATURE REVIEWS MICROBIOLOGY (2019)
Metagenomic sequencing at the epicenter of the Nigeria 2018 Lassa fever outbreak
L. E. Kafetzopoulou et al.
SCIENCE (2019)
Chikungunya virus in Asia - Pacific: a systematic review
B. M. C. Randika Wimalasiri Yapa et al.
EMERGING MICROBES & INFECTIONS (2019)
A 5700 year-old human genome and oral microbiome from chewed birch pitch
Theis Z. T. Jensen et al.
NATURE COMMUNICATIONS (2019)
Human papillomavirus 16 sub-lineage dispersal and cervical cancer risk worldwide: Whole viral genome sequences from 7116 HPV16-positive women
Gary M. Clifford et al.
PAPILLOMAVIRUS RESEARCH (2019)
Undersampling Genomes has Biased Time and Rate Estimates Throughout the Tree of Life
Julie Marin et al.
MOLECULAR BIOLOGY AND EVOLUTION (2018)
Ancient human parvovirus B19 in Eurasia reveals its long-term association with humans
Barbara Muehlemann et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2018)
The Global Virome Project
Dennis Carroll et al.
SCIENCE (2018)
Neolithic and medieval virus genomes reveal complex evolution of hepatitis B
Ben Krause-Kyora et al.
ELIFE (2018)
Re-visiting the evolution, dispersal and epidemiology of Zika virus in Asia
John H-O Pettersson et al.
EMERGING MICROBES & INFECTIONS (2018)
Origin and dispersal of Hepatitis E virus
Diego Forni et al.
EMERGING MICROBES & INFECTIONS (2018)
Ghosts of infections past: using archival samples to understand a century of monkeypox virus prevalence among host communities across space and time
Madeline S. Tiee et al.
ROYAL SOCIETY OPEN SCIENCE (2018)
Salmonella enterica genomes from victims of a major sixteenth-century epidemic in Mexico
Ashild J. Vagene et al.
NATURE ECOLOGY & EVOLUTION (2018)
Pandemics: spend on surveillance, not prediction
Edward C. Holmes et al.
NATURE (2018)
Ancient hepatitis B viruses from the Bronze Age to the Medieval period
Barbara Muhlemann et al.
NATURE (2018)
Niche adaptation and viral transmission of human papillomaviruses from archaic hominins to modern humans
Zigui Chen et al.
PLOS PATHOGENS (2018)
Emergence of Monkeypox as the Most Important Orthopoxvirus Infection in Humans
Nikola Sklenovska et al.
FRONTIERS IN PUBLIC HEALTH (2018)
Bayesian molecular dating: opening up the black box
Lindell Bromham et al.
BIOLOGICAL REVIEWS (2018)
Transmission between Archaic and Modern Human Ancestors during the Evolution of the Oncogenic Human Papillomavirus 16
Ville N. Pimenoff et al.
MOLECULAR BIOLOGY AND EVOLUTION (2017)
Bushmeat Hunting and Zoonotic Transmission of Simian T-Lymphotropic Virus 1 in Tropical West and Central Africa
Arsene Mossoun et al.
JOURNAL OF VIROLOGY (2017)
Ancient Recombination Events between Human Herpes Simplex Viruses
Sonia Burrel et al.
MOLECULAR BIOLOGY AND EVOLUTION (2017)
Evolutionary enhancement of Zika virus infectivity in Aedes aegypti mosquitoes
Yang Liu et al.
NATURE (2017)
Host and viral traits predict zoonotic spillover from mammals
Kevin J. Olival et al.
NATURE (2017)
Tracing the peopling of the world through genomics
Rasmus Nielsen et al.
NATURE (2017)
Assessing Monkeypox Virus Prevalence in Small Mammals at the Human-Animal Interface in the Democratic Republic of the Congo
Jeffrey B. Doty et al.
VIRUSES-BASEL (2017)
Worldwide circulation of HSV-2 x HSV-1 recombinant strains
David M. Koelle et al.
SCIENTIFIC REPORTS (2017)
Environmental and Social Change Drive the Explosive Emergence of Zika Virus in the Americas
Sofia Ali et al.
PLOS NEGLECTED TROPICAL DISEASES (2017)
Was Kaposi's sarcoma-associated herpesvirus introduced into China via the ancient Silk Road? An evolutionary perspective
Zhenqiu Liu et al.
ARCHIVES OF VIROLOGY (2017)
17th Century Variola Virus Reveals the Recent History of Smallpox
Ana T. Duggan et al.
CURRENT BIOLOGY (2016)
Time-Dependent Rate Phenomenon in Viruses
Pakorn Aiewsakun et al.
JOURNAL OF VIROLOGY (2016)
The Simons Genome Diversity Project: 300 genomes from 142 diverse populations
Swapan Mallick et al.
NATURE (2016)
Closing the gap between rocks and clocks using total-evidence dating
Fredrik Ronquist et al.
PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2016)
Hepacivirus cross-species transmission and the origins of the hepatitis C virus
Oliver G. Pybus et al.
CURRENT OPINION IN VIROLOGY (2016)
Measles
Paul A. Rota et al.
NATURE REVIEWS DISEASE PRIMERS (2016)
Rates of Vaccine Evolution Show Strong Effects of Latency: Implications for Varicella Zoster Virus Epidemiology
Lucy A. Weinert et al.
MOLECULAR BIOLOGY AND EVOLUTION (2015)
Origin of HTLV-1 in Hunters of Nonhuman Primates in Central Africa
Mirdad Kazanji et al.
JOURNAL OF INFECTIOUS DISEASES (2015)
Using HSV-1 Genome Phylogenetics to Track Past Human Migrations
Aaron W. Kolb et al.
PLOS ONE (2013)
Pangaea and the Out-of-Africa Model of Varicella-Zoster Virus Evolution and Phylogeography
Charles Grose
JOURNAL OF VIROLOGY (2012)
Variola Virus in a 300-Year-Old Siberian Mummy
Philippe Biagini et al.
NEW ENGLAND JOURNAL OF MEDICINE (2012)
Origins of HIV and the AIDS Pandemic
Paul M. Sharp et al.
COLD SPRING HARBOR PERSPECTIVES IN MEDICINE (2011)
The evolution of HIV-1 and the origin of AIDS
Paul M. Sharp et al.
PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2010)
Major increase in human monkeypox incidence 30 years after smallpox vaccination campaigns cease in the Democratic Republic of Congo
Anne W. Rimoin et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2010)
Origins of major human infectious diseases
Nathan D. Wolfe et al.
NATURE (2007)
Out of Africa: A molecular perspective on the introduction of yellow fever virus into the Americas
Juliet E. Bryant et al.
PLOS PATHOGENS (2007)
Topics in herpesvirus genomics and evolution
DJ McGeoch et al.
VIRUS RESEARCH (2006)
A tale of two clades: monkeypox viruses
AM Likos et al.
JOURNAL OF GENERAL VIROLOGY (2005)
Time dependency of molecular rate estimates and systematic overestimation of recent divergence times
SYW Ho et al.
MOLECULAR BIOLOGY AND EVOLUTION (2005)
The molecular population genetics of HIV-1 group O
P Lemey et al.
GENETICS (2004)
Tracing the origin and history of the HIV-2 epidemic
P Lemey et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2003)
The DNA sequence of the simian varicella virus genome
WL Gray et al.
VIROLOGY (2001)
Dating the common ancestor of SIVcpz and HIV-1 group M and the origin of HIV-1 subtypes using a new method to uncover clock-like molecular evolution
M Salemi et al.
FASEB JOURNAL (2001)
Timing the ancestor of the HIV-1 pandemic strains
B Korber et al.
SCIENCE (2000)