Immunoproteome profiling of Listeria monocytogenes under mild acid and salt stress conditions

Article Biochemical Research Methods

Deep impact of the inactivation of the SecA2-only protein export pathway on the proteosurfaceome of Listeria monocytogenes

Ingrid Chafsey et al.

Summary: Listeria monocytogenes exhibits a dimorphism associated with SecA2 activity, with significant implications for ecophysiology and pathophysiology, affecting cell surface properties and proteosurfaceome composition.

JOURNAL OF PROTEOMICS (2022)

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Article Biochemistry & Molecular Biology

The PRIDE database resources in 2022: a hub for mass spectrometry-based proteomics evidences

Yasset Perez-Riverol et al.

Summary: PRIDE is the largest data repository of mass spectrometry-based proteomics data in the world, with around 500 datasets submitted per month. In addition to continuous improvements in data pipelines and infrastructure, PRIDE has developed the Spectra Archive and MAGE-TAB file format to enhance sample metadata annotation and access to mass spectra.

NUCLEIC ACIDS RESEARCH (2022)

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Article Infectious Diseases

Seroprevalence of Listeria monocytogenes in HIV infected pregnant women from Brazil

Isabelle Geoffroy Ribeiro Freitag et al.

Summary: The study demonstrated an association between HIV infection and positive serologic response to L. monocytogenes, as well as a correlation between white cheese consumption and seroreactivity. Among pregnant women living with HIV, lower CD4+ cell count at study entry and neonates admitted to the intensive care unit were factors associated with positive serology for L. monocytogenes.

BRAZILIAN JOURNAL OF INFECTIOUS DISEASES (2021)

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Article Food Science & Technology

Genetic relationships and biofilm formation of Listeria monocytogenes isolated from the smoked salmon industry

Francesca Maggio et al.

Summary: The study found that L. monocytogenes had a significantly higher biofilm formation ability at 37 degrees Celsius compared to 30 and 12 degrees Celsius, indicating a temperature-dependent behavior. Additionally, the biofilm-forming ability exhibited a strain-specific trend not correlated with Clonal Complex (CC) or strain persistence, but instead correlated with the presence of specific genes like inl, SSI, and ermC.

INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY (2021)

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Article Biotechnology & Applied Microbiology

Genomic diversity and characterization of Listeria monocytogenes from dry-cured ham processing plants

Aida Perez-Baltar et al.

Summary: Genomic diversity of Listeria monocytogenes isolates from deboning and slicing areas in three dry-cured ham processing plants was analyzed. Different serogroups, pulsotypes, and sequence types were identified, along with premature stop codons associated with attenuated virulence and features related to biofilm formation and increased tolerance to compounds. The study suggests the need for control measures and cleaning protocols to eliminate the pathogen effectively in the processing environment.

FOOD MICROBIOLOGY (2021)

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Article Food Science & Technology

Unraveling the emergence and population diversity of Listeria monocytogenes in a newly built meat facility through whole genome sequencing

Adrian Alvarez-Molina et al.

Summary: The study conducted sampling and analysis of the food processing environment of a newly opened meat processing facility, identifying an increase in Listeria monocytogenes isolation frequency and sequence type diversity over time. Persistent strains were observed in the environment, suggesting clonal expansion and persistence of certain strains with attenuated virulence potential and plasmid presence. The analysis also showed that ST9 strains isolated were more closely related to European isolates than North American isolates and more frequently linked to meat and pork products in Europe.

INTERNATIONAL JOURNAL OF FOOD MICROBIOLOGY (2021)

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Article Infectious Diseases

Clinical and molecular epidemiology of human listeriosis in Taiwan

Yu-Tsung Huang et al.

Summary: The study in Taiwan found that non-perinatal listeriosis cases were more common in males with an average age of 63.9 years, most of whom had underlying conditions. The 30-day all-cause mortality rate was 25.2%, which was associated with age, steroid usage, and respiratory distress.

INTERNATIONAL JOURNAL OF INFECTIOUS DISEASES (2021)

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Article Food Science & Technology

Real-time PCR identification of Listeria monocytogenes serotype 4c using primers for novel target genes obtained by comparative genomic analysis

Fan Li et al.

Summary: The study identified novel target genes using comparative genomics for the specific detection of Listeria monocytogenes serotype 4c, an important serotype in aquatic products. A real-time PCR assay based on these target genes showed robust specificity and sensitivity for detecting serotype 4c, even in the presence of other L. monocytogenes serotypes and non-L. monocytogenes strains. The assay successfully detected serotype 4c in artificially contaminated grass carp without enrichment, demonstrating its potential for accurate and sensitive detection in food products.

LWT-FOOD SCIENCE AND TECHNOLOGY (2021)

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Article Microbiology

Proteomic Analysis of Listeria monocytogenes FBUNT During Biofilm Formation at 10°C in Response to Lactocin AL705

Constanza Melian et al.

Summary: The study showed that treating Listeria monocytogenes with sublethal dose of lactocin AL705 can reduce biofilm formation and induce adaptation mechanisms in the treated cells. This approach targets specific proteins to control L. monocytogenes biofilm, providing valuable data for future research.

FRONTIERS IN MICROBIOLOGY (2021)

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Article Microbiology

Phylogenetic Analysis and Genome-Wide Association Study Applied to an Italian Listeria monocytogenes Outbreak

Alexandra Chiaverini et al.

Summary: The study investigated a severe outbreak of Listeria monocytogenes ST7 strain in Central Italy, linked to a meat food-producing plant contaminated by the outbreak strain, which reemerged in the same region causing another listeriosis case. The epidemic and reemergent strains were genetically closer to a ST7 clone with different PFGE profiles, and were associated with the pork production chain. The persistence and reemergence of the outbreak were likely due to both the presence of truly persistent clones and the repeated introduction of new ones, along with the contribution of prophage genes promoting their survival. Despite no significant genomic differences between the outbreak and reemergent strains, transcriptional factor and phage genes associated with the phage LP-114 helped differentiate the related clones detected during the outbreak.

FRONTIERS IN MICROBIOLOGY (2021)

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Article Food Science & Technology

The European Union One Health 2020 Zoonoses Report

Summary: The report reviews zoonoses monitoring activities in EU Member States and non-member states in 2020, emphasizing the high reporting rates of campylobacteriosis and salmonellosis in humans and the detection of Salmonella in meat products. Additionally, the report provides updates on various diseases.

EFSA JOURNAL (2021)

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Article Biochemistry & Molecular Biology

Proteomic Exploration of Listeria monocytogenes for the Purpose of Vaccine Designing Using a Reverse Vaccinology Approach

Shivani Srivastava et al.

Summary: This study focuses on predicting B cell epitopes for subunit vaccine design against Listeria monocytogenes using a reverse vaccinology approach. The top epitope FLKIDPPIL was identified as the best vaccine contender based on binding energy, non-toxicity, and population coverage investigation. Simulation showed the stability of the FLKIDPPIL-HLA DRB1_0101 complex, suggesting its potential as a remedy against listeriosis after further wet-lab and clinical trials.

INTERNATIONAL JOURNAL OF PEPTIDE RESEARCH AND THERAPEUTICS (2021)

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Article Microbiology

Initial Transcriptomic Response and Adaption of Listeria monocytogenes to Desiccation on Food Grade Stainless Steel

Martin Laage Kragh et al.

FRONTIERS IN MICROBIOLOGY (2020)

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Article Public, Environmental & Occupational Health

Population Structure ofListeria monocytogenesin Emilia-Romagna (Italy) and Implications on Whole Genome Sequencing Surveillance of Listeriosis

Erika Scaltriti et al.

FRONTIERS IN PUBLIC HEALTH (2020)

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Article Microbiology

Global Transcriptional Response of Three Highly Acid-Tolerant Field Strains of Listeria monocytogenes to HCl Stress

Anna Horlbog et al.

MICROORGANISMS (2019)

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Review Food Science & Technology

The prevalence of Listeria spp. food contamination in Iran: A systematic review and meta-analysis

Negar Hamidiyan et al.

FOOD RESEARCH INTERNATIONAL (2018)

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Article Microbiology

A severe outbreak of listeriosis in central Italy with a rare pulsotype associated with processed pork products

Anna Duranti et al.

JOURNAL OF MEDICAL MICROBIOLOGY (2018)

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Article Microbiology

Flagellar Basal Body Structural Proteins FlhB, FliM, and FliY Are Required for Flagellar-Associated Protein Expression in Listeria monocytogenes

Changyong Cheng et al.

FRONTIERS IN MICROBIOLOGY (2018)

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Article Microbiology

Whole-Genome Sequence of a Reemerging Listeria monocytogenes Serovar 1/2a Strain in Central Italy

Massimiliano Orsini et al.

MICROBIOLOGY RESOURCE ANNOUNCEMENTS (2018)

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Article

Whole-Genome Sequences of Two Listeria monocytogenes Serovar 1/2a Strains Responsible for a Severe Listeriosis Outbreak in Central Italy

Massimiliano Orsini et al.

GENOME ANNOUNCEMENTS (2018)

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Article Biotechnology & Applied Microbiology

Screening of the two-component-system histidine kinases of Listeria monocytogenes EGD-e. LiaS is needed for growth under heat, acid, alkali, osmotic, ethanol and oxidative stresses

Anna Pontinen et al.

FOOD MICROBIOLOGY (2017)

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Article Biochemistry & Molecular Biology

BepiPred-2.0: improving sequence-based B-cell epitope prediction using conformational epitopes

Martin Closter Jespersen et al.

NUCLEIC ACIDS RESEARCH (2017)

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Review Microbiology

Common Non-classically Secreted Bacterial Proteins with Experimental Evidence

Guangqiang Wang et al.

CURRENT MICROBIOLOGY (2016)

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Article Microbiology

Different Transcriptional Responses from Slow and Fast Growth Rate Strains of Listeria monocytogenes Adapted to Low Temperature

Ninoska Cordero et al.

FRONTIERS IN MICROBIOLOGY (2016)

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Article Microbiology

RT-qPCR Analysis of 15 Genes Encoding Putative Surface Proteins Involved in Adherence of Listeria monocytogenes

Hung King Tiong et al.

PATHOGENS (2016)

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Article Biochemical Research Methods

Genome-wide prediction of vaccine targets for human herpes simplex viruses using Vaxign reverse vaccinology

Zuoshuang Xiang et al.

BMC BIOINFORMATICS (2013)

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Article Biochemical Research Methods

Two-dimensional fluorescence difference gel electrophoresis analysis of Listeria monocytogenes submitted to a redox shock

Maria Ignatova et al.

JOURNAL OF PROTEOMICS (2013)

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Article Multidisciplinary Sciences

Characterisation of the Transcriptomes of Genetically Diverse Listeria monocytogenes Exposed to Hyperosmotic and Low Temperature Conditions Reveal Global Stress-Adaptation Mechanisms

Juliana Durack et al.

PLOS ONE (2013)

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Article Food Science & Technology

Listeria monocytogenes isolated from the smoked salmon industry: Growth potential under different environmental conditions

A. Serio et al.

FOOD CONTROL (2011)

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Article Multidisciplinary Sciences

Blue and Red Light Modulates SigB-Dependent Gene Transcription, Swimming Motility and Invasiveness in Listeria monocytogenes

Nicolai Ondrusch et al.

PLOS ONE (2011)

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Article Biochemical Research Methods

PSORTb 3.0: improved protein subcellular localization prediction with refined localization subcategories and predictive capabilities for all prokaryotes

Nancy Y. Yu et al.

BIOINFORMATICS (2010)

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Article Biotechnology & Applied Microbiology

Vaxign: The First Web-Based Vaccine Design Program for Reverse Vaccinology and Applications for Vaccine Development

Yongqun He et al.

JOURNAL OF BIOMEDICINE AND BIOTECHNOLOGY (2010)

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Article Biotechnology & Applied Microbiology

Electronic paramagnetic resonance investigation of the activity of Origanum vulgare L. essential oil on the Listeria monocytogenes membrane

A. Serio et al.

LETTERS IN APPLIED MICROBIOLOGY (2010)

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Article Biochemical Research Methods

Protein subcellular localization prediction of eukaryotes using a knowledge-based approach

Hsin-Nan Lin et al.

BMC BIOINFORMATICS (2009)

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Article Biophysics

A generic method for assignment of reliability scores applied to solvent accessibility predictions

Bent Petersen et al.

BMC STRUCTURAL BIOLOGY (2009)

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Article Biochemical Research Methods

VirulentPred: a SVM based prediction method for virulent proteins in bacterial pathogens

Aarti Garg et al.

BMC BIOINFORMATICS (2008)

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Review Biotechnology & Applied Microbiology

Methods for the bioinformatic identification of bacterial lipoproteins encoded in the genomes of Gram-positive bacteria

Obaidur Rahman et al.

WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY (2008)

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Article Microbiology

Pathogenomics of Listeria spp.

Torsten Hain et al.

INTERNATIONAL JOURNAL OF MEDICAL MICROBIOLOGY (2007)

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Article Immunology

Identifying candidate subunit vaccines using an alignment-independent method based on principal amino acid properties

Irini A. Doytchinova et al.

VACCINE (2007)

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Article Biochemical Research Methods

VaxiJen: a server for prediction of protective antigens, tumour antigens and subunit vaccines

Irini A. Doytchinova et al.

BMC BIOINFORMATICS (2007)

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Article Cell Biology

Characterization of flagellin expression and its role in Listeria monocytogenes infection and immunity

SS Way et al.

CELLULAR MICROBIOLOGY (2004)

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Article Biochemistry & Molecular Biology

Predicting subcellular localization of proteins for Gram-negative bacteria by support vector machines based on n-peptide compositions

CS Yu et al.

PROTEIN SCIENCE (2004)

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Article Chemistry, Analytical

A statistical model for identifying proteins by tandem mass spectrometry

AI Nesvizhskii et al.

ANALYTICAL CHEMISTRY (2003)

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Article Chemistry, Analytical

Stop and go extraction tips for matrix-assisted laser desorption/ionization, nanoelectrospray, and LC/MS sample pretreatment in proteomics

J Rappsilber et al.

ANALYTICAL CHEMISTRY (2003)

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Article Biochemistry & Molecular Biology

Predicting transmembrane protein topology with a hidden Markov model: Application to complete genomes

A Krogh et al.

JOURNAL OF MOLECULAR BIOLOGY (2001)

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Immunoproteome profiling of Listeria monocytogenes under mild acid and salt stress conditions

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