4.5 Article

Architecture of the human erythrocyte ankyrin-1 complex

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Biochemistry & Molecular Biology

UCSF ChimeraX: Structure visualization for researchers, educators, and developers

Eric F. Pettersen et al.

Summary: UCSF ChimeraX is a powerful visualization program with enhanced performance and graphics, offering new tools and analysis features, support for various areas like virtual reality, and improved ease of use, along with an app store for researchers to contribute new tools.

PROTEIN SCIENCE (2021)

Article Biochemistry & Molecular Biology

New tools for automated cryo-EM single-particle analysis in RELION-4.0

Dari Kimanius et al.

Summary: This article introduces new tools for processing cryo-EM images in the fourth major release of the RELION software, including VDAM algorithm, convolutional neural network, and a framework for executing multiple jobs, along with a utility called MDCatch for metadata gathering during microscope data acquisition. These tools aim to provide fast and robust procedures for unsupervised cryo-EM structure determination, with potential applications for on-the-fly processing and flexible, high-throughput structure determination pipelines.

BIOCHEMICAL JOURNAL (2021)

Article Biology

Ankyrin-R regulates fast-spiking interneuron excitability through perineuronal nets and Kv3.1b K+ channels

Sharon R. Stevens et al.

Summary: AnkR is highly enriched in Pv(+) fast-spiking interneurons in mice and humans, and is associated with cytoskeletal proteins, cell adhesion molecules (CAMs), and perineuronal nets (PNNs). Loss of AnkR leads to disruption of PNNs, decreases in anxiety-like behaviors, and changes in the excitability and firing properties of Pv(+) fast-spiking interneurons, which is accompanied by a reduction in Kv3.1b K+ channels. AnkR plays a crucial role in organizing ion channels, CAMs, and PNNs in interneurons and at nodes of Ranvier.
Article Multidisciplinary Sciences

Improved protein structure prediction using predicted interresidue orientations

Jianyi Yang et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2020)

Article Biochemical Research Methods

Real-time cryo-electron microscopy data preprocessing with Warp

Dimitry Tegunov et al.

NATURE METHODS (2019)

Article Biochemical Research Methods

Positive-unlabeled convolutional neural networks for particle picking in cryo-electron micrographs

Tristan Bepler et al.

NATURE METHODS (2019)

Article Biology

SPHIRE-crYOLO is a fast and accurate fully automated particle picker for cryo-EM

Thorsten Wagner et al.

COMMUNICATIONS BIOLOGY (2019)

Article Multidisciplinary Sciences

Quantitative mass imaging of single biological macromolecules

Gavin Young et al.

SCIENCE (2018)

Article Biochemical Research Methods

Real-space refinement in PHENIX for cryo-EM and crystallography

Pavel V. Afonine et al.

ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY (2018)

Review Neurosciences

The Actin/Spectrin Membrane-Associated Periodic Skeleton in Neurons

Nicolas Unsain et al.

FRONTIERS IN SYNAPTIC NEUROSCIENCE (2018)

Letter Biochemical Research Methods

MotionCor2: anisotropic correction of beam-induced motion for improved cryo-electron microscopy

Shawn Q. Zheng et al.

NATURE METHODS (2017)

Article Biochemical Research Methods

cryoSPARC: algorithms for rapid unsupervised cryo-EM structure determination

Ali Punjani et al.

NATURE METHODS (2017)

Article Biochemistry & Molecular Biology

Tomo3D 2.0-Exploitation of Advanced Vector eXtensions (AVX) for 3D reconstruction

Jose-Ignacio Agulleiro et al.

JOURNAL OF STRUCTURAL BIOLOGY (2015)

Article Biochemistry & Molecular Biology

Automated batch fiducial-less tilt-series alignment in Appion using Protomo

Alex J. Noble et al.

JOURNAL OF STRUCTURAL BIOLOGY (2015)

Article Chemistry, Multidisciplinary

Crystal Structure of the Glycophorin A Transmembrane Dimer in Lipidic Cubic Phase

Raphael Trenker et al.

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2015)

Article Multidisciplinary Sciences

Crystal structure of the anion exchanger domain of human erythrocyte band 3

Takatoshi Arakawa et al.

SCIENCE (2015)

Article Multidisciplinary Sciences

Giant ankyrin-G: A critical innovation in vertebrate evolution of fast and integrated neuronal signaling

Paul M. Jenkins et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2015)

Article Biochemical Research Methods

Crystallization and preliminary crystallographic analysis of human aquaporin 1 at a resolution of 3.28 angstrom

David Ruiz Carrillo et al.

ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS (2014)

Article Biochemistry & Molecular Biology

Relative CO2/NH3 Permeabilities of Human RhAG, RhBG and RhCG

R. Ryan Geyer et al.

JOURNAL OF MEMBRANE BIOLOGY (2013)

Article Hematology

Refined views of multi-protein complexes in the erythrocyte membrane

T. J. Mankelow et al.

BLOOD CELLS MOLECULES AND DISEASES (2012)

Article Biochemical Research Methods

Overview of the CCP4 suite and current developments

Martyn D. Winn et al.

ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY (2011)

Article Biochemical Research Methods

Fast tomographic reconstruction on multicore computers

J. I. Agulleiro et al.

BIOINFORMATICS (2011)

Article Biochemistry & Molecular Biology

Determination of Structural Models of the Complex between the Cytoplasmic Domain of Erythrocyte Band 3 and Ankyrin-R Repeats 13-24

Sunghoon Kim et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2011)

Article Biochemical Research Methods

Features and development of Coot

P. Emsley et al.

ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY (2010)

Article Multidisciplinary Sciences

Function of human Rh based on structure of RhCG at 2.1 Å

Franz Gruswitz et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2010)

Review Hematology

Protein 4.2: A complex linker

Timothy J. Satchwell et al.

BLOOD CELLS MOLECULES AND DISEASES (2009)

Article Biochemistry & Molecular Biology

Fully automated, sequential tilt-series acquisition with Leginon

Christian Suloway et al.

JOURNAL OF STRUCTURAL BIOLOGY (2009)

Article Biochemistry & Molecular Biology

Appion: An integrated, database-driven pipeline to facilitate EM image processing

Gabriel C. Lander et al.

JOURNAL OF STRUCTURAL BIOLOGY (2009)

Article Hematology

Glycophorin A: Band 3 aid

Rosalind C. Williamson et al.

BLOOD CELLS MOLECULES AND DISEASES (2008)

Article Hematology

Structure, function and significance of Rh proteins in red cells

Nicholas M. Burton et al.

CURRENT OPINION IN HEMATOLOGY (2008)

Article Biochemistry & Molecular Biology

RhAG protein of the Rhesus complex is a CO2 channel in the human red cell membrane

Volker Endeward et al.

FASEB JOURNAL (2008)

Software Review Chemistry, Multidisciplinary

CHAINSAW: a program for mutating pdb files used as templates in molecular replacement

Norman Stein

JOURNAL OF APPLIED CRYSTALLOGRAPHY (2008)

Review Medicine, General & Internal

Hereditary spherocytosis

Silverio Perrotta et al.

LANCET (2008)

Review Biochemistry & Molecular Biology

Organizing the diseases fluid membrane bilayer: diseases linked to spectrin and ankyrin

Vann Bennett et al.

TRENDS IN MOLECULAR MEDICINE (2008)

Review Urology & Nephrology

Ammonium homeostasis and human rhesus glycoproteins

Gabrielle Planelles

NEPHRON PHYSIOLOGY (2007)

Article Biochemistry & Molecular Biology

Evidence that aquaporin 1 is a major pathway for CO2 transport across the human erythrocyte membrane

V. Endeward et al.

FASEB JOURNAL (2006)

Article Cell Biology

Associations of protein 4.2 with band 3 and ankyrin

Yang Su et al.

MOLECULAR AND CELLULAR BIOCHEMISTRY (2006)

Article Biochemistry & Molecular Biology

Interaction of glucose transporter 1 with anion exchanger 1 in vitro

WH Jiang et al.

BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS (2006)

Article Hematology

Modelling the human rhesus proteins: implications for structure and function

MJ Conroy et al.

BRITISH JOURNAL OF HAEMATOLOGY (2005)

Article Biochemical Research Methods

Coot:: model-building tools for molecular graphics

P Emsley et al.

ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY (2004)

Article Chemistry, Multidisciplinary

UCSF chimera - A visualization system for exploratory research and analysis

EF Pettersen et al.

JOURNAL OF COMPUTATIONAL CHEMISTRY (2004)

Article Biochemistry & Molecular Biology

Crystal structure of a 12 ANK repeat stack from human ankyrinR

P Michaely et al.

EMBO JOURNAL (2002)

Article Hematology

A membrane metabolon linking carbonic anhydrase with chloride/bicarbonate anion exchangers

RAF Reithmeier

BLOOD CELLS MOLECULES AND DISEASES (2001)