4.6 Article

Human and Bacterial Toll-Interleukin Receptor Domains Exhibit Distinct Dynamic Features and Functions

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Biochemistry & Molecular Biology

Isocratic HPLC analysis for the simultaneous determination of dNTPs, rNTPs and ADP in biological samples

Farahnaz Ranjbarian et al.

Summary: Information about cellular concentrations of dNTPs is crucial for studying DNA replication and understanding diseases related to dNTP metabolism. We have developed a new HPLC-based method that can measure dNTPs, rNTPs, and ADP simultaneously with high accuracy and reliability.

NUCLEIC ACIDS RESEARCH (2022)

Article Biology

Modulation of Toll-like receptor 1 intracellular domain structure and activity by Zn2+ ions

Vladislav A. Lushpa et al.

Summary: Lushpa et al report the structure and dynamics of the TLR1 toll-interleukin like (TIR) cytoplasmic domain in both crystal and solution. They demonstrate that the TLR1 TIR domain is capable of specific binding of Zn with nanomolar affinity, which appears to be critical for receptor activation, and provide potential structures TLR1-TIR/Zn complex based on in silico data.

COMMUNICATIONS BIOLOGY (2021)

Article Neurosciences

SARM1 is a metabolic sensor activated by an increased NMN/NAD+ ratio to trigger axon degeneration

Matthew D. Figley et al.

Summary: SARM1 is a nicotinamide adenine dinucleotide (NAD+)-cleaving enzyme that is activated by an increase in the ratio of NMN to NAD+, triggering axon destruction. The structural analysis showed that both NMN and NAD+ compete for binding to the auto inhibitory N-terminal armadillo repeat (ARM) domain of SARM1.

NEURON (2021)

Article Cell Biology

Structural and Mechanistic Regulation of the Pro-degenerative NAD Hydrolase SARM1

Matthew Bratkowski et al.

CELL REPORTS (2020)

Article Multidisciplinary Sciences

Mechanism and inhibition of Streptococcus pneumoniae IgA1 protease

Zhiming Wang et al.

NATURE COMMUNICATIONS (2020)

Article Multidisciplinary Sciences

Interleukin-37 monomer is the active form for reducing innate immunity

Elan Z. Eisenmesser et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2019)

Article Biochemistry & Molecular Biology

Structural Evidence for an Octameric Ring Arrangement of SARM1

Michael Sporny et al.

JOURNAL OF MOLECULAR BIOLOGY (2019)

Article Biochemistry & Molecular Biology

Streptococcus pneumoniae G5 domains bind different ligands

Natasia Paukovich et al.

PROTEIN SCIENCE (2019)

Article Multidisciplinary Sciences

NAD+ cleavage activity by animal an plant TIR domains in cell death pathways

Shane Horsefield et al.

SCIENCE (2019)

Review Cell Biology

Death, TIR, and RHIM: Self-assembling domains involved in innate immunity and cell-death signaling

Jeffrey D. Nanson et al.

JOURNAL OF LEUKOCYTE BIOLOGY (2019)

Article Biochemistry & Molecular Biology

TIR Domain Proteins Are an Ancient Family of NAD+-Consuming Enzymes

Kow Essuman et al.

CURRENT BIOLOGY (2018)

Review Immunology

Toll-like receptors in immunity and inflammatory diseases: Past, present, and future

Kumar Vijay

INTERNATIONAL IMMUNOPHARMACOLOGY (2018)

Article Biochemistry & Molecular Biology

Biliverdin Reductase B Dynamics Are Coupled to Coenzyme Binding

Natasia Paukovich et al.

JOURNAL OF MOLECULAR BIOLOGY (2018)

Review Plant Sciences

Uncoiling CNLs: Structure/Function Approaches to Understanding CC Domain Function in Plant NLRs

Adam R. Bentham et al.

PLANT AND CELL PHYSIOLOGY (2018)

Article Multidisciplinary Sciences

Interleukin 4 is inactivated via selective disulfide-bond reduction by extracellular thioredoxin

Nicholas M. Plugis et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2018)

Review Immunology

Tug of war between Acinetobacter baumannii and host immune responses

Fei-Ju Li et al.

PATHOGENS AND DISEASE (2018)

Article Biochemical Research Methods

MSFragger: ultrafast and comprehensive peptide identification in mass spectrometry-based proteomics

Andy T. Kong et al.

NATURE METHODS (2017)

Article Biochemistry & Molecular Biology

Structural basis of TIR-domain-assembly formation in MAL- and MyD88-dependent TLR4 signaling

Thomas Ve et al.

NATURE STRUCTURAL & MOLECULAR BIOLOGY (2017)

Article Multidisciplinary Sciences

Solution structure of the TLR adaptor MAL/TIRAP reveals an intact BB loop and supports MAL Cys91 glutathionylation for signaling

Mark M. Hughes et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2017)

Article Biochemistry & Molecular Biology

Structural basis of TIR-domain-assembly formation in MAL- and MyD88-dependent TLR4 signaling

Thomas Ve et al.

NATURE STRUCTURAL & MOLECULAR BIOLOGY (2017)

Article Biochemistry & Molecular Biology

Towards the structure of the TIR-domain signalosome

Surekha Nimma et al.

CURRENT OPINION IN STRUCTURAL BIOLOGY (2017)

Article Biochemistry & Molecular Biology

Structural basis of PDZ-mediated chemokine receptor CXCR2 scaffolding by guanine nucleotide exchange factor PDZ-RhoGEF

Nicholas Spellmon et al.

BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS (2017)

Article Biochemistry & Molecular Biology

SARM modulates MyD88-mediated TLR activation through BB-loop dependent TIR-TIR interactions

Emil Carlsson et al.

BIOCHIMICA ET BIOPHYSICA ACTA-MOLECULAR CELL RESEARCH (2016)

Article Biochemistry & Molecular Biology

Reconstructing the TIR Side of the Myddosome: a Paradigm for TIR-TIR Interactions

Laurens Vyncke et al.

STRUCTURE (2016)

Article Biochemistry & Molecular Biology

Toll/interleukin-1 receptor (TIR) domain-mediated cellular signaling pathways

Kannan Badri Narayanan et al.

APOPTOSIS (2015)

Article Biochemistry & Molecular Biology

Crystal structure of the NHERF1 PDZ2 domain in complex with the chemokine receptor CXCR2 reveals probable modes of PDZ2 dimerization

Joshua Holcomb et al.

BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS (2014)

Article Biochemistry & Molecular Biology

Activation of c-Src: A hub for exogenous pro-oxidant-mediated activation of Toll-like receptor 4 signaling

Rajendra Karki et al.

FREE RADICAL BIOLOGY AND MEDICINE (2014)

Article Biochemistry & Molecular Biology

Mechanism of Bacterial Interference with TLR4 Signaling by Brucella Toll/Interleukin-1 Receptor Domain-containing Protein TcpB

Mohammed Alaidarous et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2014)

Article Biochemistry & Molecular Biology

CSI 2.0: a significantly improved version of the Chemical Shift Index

Noor E. Hafsa et al.

JOURNAL OF BIOMOLECULAR NMR (2014)

Article Immunology

A Staphylococcus aureus TO Domain Protein Virulence Factor Blocks TLR2-Mediated NF-KB Signaling

Fatenneh Askarian et al.

JOURNAL OF INNATE IMMUNITY (2014)

Article Biochemistry & Molecular Biology

The dynamics of interleukin-8 and its interaction with human CXC receptor I peptide

Agnieszka A. Kendrick et al.

PROTEIN SCIENCE (2014)

Editorial Material Gastroenterology & Hepatology

Novel role of toll-like receptors in Helicobacter pylori - induced gastric malignancy

Kaname Uno et al.

WORLD JOURNAL OF GASTROENTEROLOGY (2014)

Article Multidisciplinary Sciences

Molecular mechanisms for the subversion of MyD88 signaling by TcpC from virulent uropathogenic Escherichia coli

Greg A. Snyder et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2013)

Editorial Material Immunology

Overview of the interleukin-1 family of ligands and receptors

Charles A. Dinarello

SEMINARS IN IMMUNOLOGY (2013)

Article Immunology

The history of Toll-like receptors - redefining innate immunity

Luke A. J. O'Neill et al.

NATURE REVIEWS IMMUNOLOGY (2013)

Article Biochemistry & Molecular Biology

Molecular analysis of the binding mode of Toll/interleukin-1 receptor (TIR) domain proteins during TLR2 signaling

Masatoshi Nada et al.

MOLECULAR IMMUNOLOGY (2012)

Article Multidisciplinary Sciences

Determination of solution structures of proteins up to 40 kDa using CS-Rosetta with sparse NMR data from deuterated samples

Oliver F. Lange et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)

Review Rheumatology

Inflammation in osteoarthritis

Mary B. Goldring et al.

CURRENT OPINION IN RHEUMATOLOGY (2011)

Article Rheumatology

Expression of Toll-like Receptors and Their Signaling Pathways in Rheumatoid Synovitis

Yasunobu Tamaki et al.

JOURNAL OF RHEUMATOLOGY (2011)

Article Chemistry, Analytical

Metabolomic Analysis and Visualization Engine for LC-MS Data

Eugene Melamud et al.

ANALYTICAL CHEMISTRY (2010)

Review Cell Biology

Inflammation and oncogenesis: a vicious connection

Sergei I. Grivennikov et al.

CURRENT OPINION IN GENETICS & DEVELOPMENT (2010)

Article Multidisciplinary Sciences

Helical assembly in the MyD88-IRAK4-IRAK2 complex in TLR/IL-1R signalling

Su-Chang Lin et al.

NATURE (2010)

Article Biochemistry & Molecular Biology

Toll-like receptor 2 mediates invasion via activating NF-κB in MDA-MB-231 breast cancer cells

Wenjie Xie et al.

BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS (2009)

Article Biochemistry & Molecular Biology

Molecular Mimicry in Innate Immunity CRYSTAL STRUCTURE OF A BACTERIAL TIR DOMAIN

Siew Leong Chan et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2009)

Article Biochemistry & Molecular Biology

The crystal structure of the human Toll-like receptor 10 cytoplasmic domain reveals a putative signaling dimer

Tomas Nyman et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2008)

Article Biophysics

Role of intramolecular disulfides in stability and structure of a noncovalent homodimer

Lavanya Rajagopalan et al.

BIOPHYSICAL JOURNAL (2007)

Article Biochemistry & Molecular Biology

Characterization of a TIR-like protein from Paracoccus denitrificans

Lieh Yoon Low et al.

BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS (2007)