相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。The gut microbiome influences host diet selection behavior
Brian K. Trevelline et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2022)
The era of reference genomes in conservation genomics
Giulio Formenti et al.
TRENDS IN ECOLOGY & EVOLUTION (2022)
Social groups constrain the spatiotemporal dynamics of wild sifaka gut microbiomes
Amanda C. Perofsky et al.
MOLECULAR ECOLOGY (2021)
Effects of domestication on the gut microbiota parallel those of human industrialization
Aspen T. Reese et al.
ELIFE (2021)
The oral microbiota of wild bears in Sweden reflects the history of antibiotic use by humans
Jaelle C. Brealey et al.
CURRENT BIOLOGY (2021)
Gut microbiome heritability is nearly universal but environmentally contingent
Laura Grieneisen et al.
SCIENCE (2021)
Diet of Grauer's Gorillas (Gorilla beringei graueri) in a Low-Elevation Forest
Yntze van der Hoek et al.
FOLIA PRIMATOLOGICA (2021)
Daily Travel Distances of Unhabituated Grauer's Gorillas (Gorilla beringei graueri) in a Low Elevation Forest
Yntze Van der Hoek et al.
FOLIA PRIMATOLOGICA (2021)
genodiveversion 3.0: Easy-to-use software for the analysis of genetic data of diploids and polyploids
Patrick G. Meirmans
MOLECULAR ECOLOGY RESOURCES (2020)
Interactions between social groups of colobus monkeys (Colobus vellerosus) explain similarities in their gut microbiomes
Eva C. Wikberg et al.
ANIMAL BEHAVIOUR (2020)
Dental Calculus as a Tool to Study the Evolution of the Mammalian Oral Microbiome
Jaelle C. Brealey et al.
MOLECULAR BIOLOGY AND EVOLUTION (2020)
Researchers' ethical concerns regarding habituating wild-nonhuman primates and perceived ethical duties to their subjects: Results of an online survey
Victoria M. Green et al.
AMERICAN JOURNAL OF PRIMATOLOGY (2020)
Identifying Microbiome-Mediated Behaviour in Wild Vertebrates
Gabrielle L. Davidson et al.
TRENDS IN ECOLOGY & EVOLUTION (2020)
Counting with DNA in metabarcoding studies: How should we convert sequence reads to dietary data?
Bruce E. Deagle et al.
MOLECULAR ECOLOGY (2019)
Comparison of Methods To Examine Diet of Feral Horses from Noninvasively Collected Fecal Samples
Sarah R. B. King et al.
RANGELAND ECOLOGY & MANAGEMENT (2019)
Contamination in Low Microbial Biomass Microbiome Studies: Issues and Recommendations
Raphael Eisenhofer et al.
TRENDS IN MICROBIOLOGY (2019)
Giant Pandas Are Macronutritional Carnivores
Yonggang Nie et al.
CURRENT BIOLOGY (2019)
Microbiome composition shapes rapid genomic adaptation of Drosophila melanogaster
Seth M. Rudman et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2019)
The microbiome in threatened species conservation
Annie G. West et al.
BIOLOGICAL CONSERVATION (2019)
Population-level assessment of genetic diversity and habitat fragmentation in critically endangered Grauer's gorillas
Pauline Baas et al.
AMERICAN JOURNAL OF PHYSICAL ANTHROPOLOGY (2018)
Updating the 97% identity threshold for 16S ribosomal RNA OTUs
Robert C. Edgar
BIOINFORMATICS (2018)
trnL outperforms rbcL as a DNA metabarcoding marker when compared with the observed plant component of the diet of wild white-faced capuchins (Cebus capucinus, Primates)
Elizabeth K. Mallott et al.
PLOS ONE (2018)
Earth BioGenome Project: Sequencing life for the future of life
Harris A. Lewin et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2018)
A global atlas of the dominant bacteria found in soil
Manuel Delgado-Baquerizo et al.
SCIENCE (2018)
POPHELPER: an R package and web app to analyse and visualize population structure
R. M. Francis
MOLECULAR ECOLOGY RESOURCES (2017)
Hierarchical social networks shape gut microbial composition in wild Verreaux's sifaka
Amanda C. Perofsky et al.
PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2017)
Metacoder: An R package for visualization and manipulation of community taxonomic diversity data
Zachary S. L. Foster et al.
PLOS COMPUTATIONAL BIOLOGY (2017)
A phylogenetic transform enhances analysis of compositional microbiota data
Justin D. Silverman et al.
ELIFE (2017)
Evolutionary Biology Needs Wild Microbiomes
Sarah M. Hird
FRONTIERS IN MICROBIOLOGY (2017)
Microbiome Datasets Are Compositional: And This Is Not Optional
Gregory B. Gloor et al.
FRONTIERS IN MICROBIOLOGY (2017)
Normalization and microbial differential abundance strategies depend upon data characteristics
Sophie Weiss et al.
MICROBIOME (2017)
Temporal variation selects for diet-microbe co-metabolic traits in the gut of Gorilla spp
Andres Gomez et al.
ISME JOURNAL (2016)
OBITOOLS: a UNIX-inspired software package for DNA metabarcoding
Frederic Boyer et al.
MOLECULAR ECOLOGY RESOURCES (2016)
DADA2: High-resolution sample inference from Illumina amplicon data
Benjamin J. Callahan et al.
NATURE METHODS (2016)
Do Vertebrate Gut Metagenomes Confer Rapid Ecological Adaptation?
Antton Alberdi et al.
TRENDS IN ECOLOGY & EVOLUTION (2016)
Social behavior shapes the chimpanzee pan-microbiome
Andrew H. Moeller et al.
SCIENCE ADVANCES (2016)
zCompositions - R Package for multivariate imputation of left-censored data under a compositional approach
Javier Palarea-Albaladejo et al.
CHEMOMETRICS AND INTELLIGENT LABORATORY SYSTEMS (2015)
Fitting Linear Mixed-Effects Models Using lme4
Douglas Bates et al.
JOURNAL OF STATISTICAL SOFTWARE (2015)
Gut microbiome composition and metabolomic profiles of wild western lowland gorillas (Gorilla gorilla gorilla) reflect host ecology
Andres Gomez et al.
MOLECULAR ECOLOGY (2015)
Clumpak: a program for identifying clustering modes and packaging population structure inferences across K
Naama M. Kopelman et al.
MOLECULAR ECOLOGY RESOURCES (2015)
Social networks predict gut microbiome composition in wild baboons
Jenny Tung et al.
ELIFE (2015)
Partial uracil - DNA - glycosylase treatment for screening of ancient DNA
Nadin Rohland et al.
PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2015)
Seasonal Shifts in Diet and Gut Microbiota of the American Bison (Bison bison)
Gaddy T. Bergmann et al.
PLOS ONE (2015)
Social behavior and the microbiome
Elizabeth A. Archie et al.
CURRENT OPINION IN BEHAVIORAL SCIENCES (2015)
A multivariate approach to the integration of multi-omics datasets
Chen Meng et al.
BMC BIOINFORMATICS (2014)
Rarefaction and extrapolation with Hill numbers: a framework for sampling and estimation in species diversity studies
Anne Chao et al.
ECOLOGICAL MONOGRAPHS (2014)
Ward's Hierarchical Agglomerative Clustering Method: Which Algorithms Implement Ward's Criterion?
Fionn Murtagh et al.
JOURNAL OF CLASSIFICATION (2014)
Rapid changes in the gut microbiome during human evolution
Andrew H. Moeller et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)
Poppr: an R package for genetic analysis of populations with clonal, partially clonal, and/or sexual reproduction
Zhian N. Kamvar et al.
PEERJ (2014)
PERMANOVA, ANOSIM, and the Mantel test in the face of heterogeneous dispersions: What null hypothesis are you testing?
Marti J. Anderson et al.
ECOLOGICAL MONOGRAPHS (2013)
The SILVA ribosomal RNA gene database project: improved data processing and web-based tools
Christian Quast et al.
NUCLEIC ACIDS RESEARCH (2013)
A DNA Metabarcoding Study of a Primate Dietary Diversity and Plasticity across Its Entire Fragmented Range
Erwan Quemere et al.
PLOS ONE (2013)
Unveiling the Diet of Elusive Rainforest Herbivores in Next Generation Sequencing Era? The Tapir as a Case Study
Fabrice Hibert et al.
PLOS ONE (2013)
phyloseq: An R Package for Reproducible Interactive Analysis and Graphics of Microbiome Census Data
Paul J. McMurdie et al.
PLOS ONE (2013)
An overview of STRUCTURE: applications, parameter settings, and supporting software
Liliana Porras-Hurtado et al.
Frontiers in Genetics (2013)
Carnivore diet analysis based on next-generation sequencing: application to the leopard cat (Prionailurus bengalensis) in Pakistan
Wasim Shehzad et al.
MOLECULAR ECOLOGY (2012)
Double indexing overcomes inaccuracies in multiplex sequencing on the Illumina platform
Martin Kircher et al.
NUCLEIC ACIDS RESEARCH (2012)
Factors associated with the diversification of the gut microbial communities within chimpanzees from Gombe National Park
Patrick H. Degnan et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)
Assessing population structure: F-ST and related measures
Patrick G. Meirmans et al.
MOLECULAR ECOLOGY RESOURCES (2011)
An In silico approach for the evaluation of DNA barcodes
Gentile Francesco Ficetola et al.
BMC GENOMICS (2010)
Chromoplast Differentiation: Current Status and Perspectives
Isabel Egea et al.
PLANT AND CELL PHYSIOLOGY (2010)
DNA barcoding for ecologists
Alice Valentini et al.
TRENDS IN ECOLOGY & EVOLUTION (2009)
adegenet:: a R package for the multivariate analysis of genetic markers
Thibaut Jombart
BIOINFORMATICS (2008)
compositions: A unified R package to analyze compositional data
K. Gerald van den Boogaart et al.
COMPUTERS & GEOSCIENCES (2008)
Females Shape the Genetic Structure of a Gorilla Population
Katerina Guschanski et al.
CURRENT BIOLOGY (2008)
CLUMPP: a cluster matching and permutation program for dealing with label switching and multimodality in analysis of population structure
Mattias Jakobsson et al.
BIOINFORMATICS (2007)
Power and limitations of the chloroplast trnL (UAA) intron for plant DNA barcoding
Pierre Taberlet et al.
NUCLEIC ACIDS RESEARCH (2007)
Multiple regression on distance matrices: a multivariate spatial analysis tool
Jeremy W. Lichstein
PLANT ECOLOGY (2007)
Reference based annotation with GeneMapper
Sourav Chatterji et al.
GENOME BIOLOGY (2006)
Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study
G Evanno et al.
MOLECULAR ECOLOGY (2005)
Western gorilla diet: A synthesis from six sites
ME Rogers et al.
AMERICAN JOURNAL OF PRIMATOLOGY (2004)
Nutritional aspects of western lowland gorilla (Gorilla gorilla gorilla) diet during seasons of fruit scarcity at Bai Hokou, Central African Republic
MJ Remis et al.
INTERNATIONAL JOURNAL OF PRIMATOLOGY (2001)
Accurate DNA-based sex identification of apes using non-invasive samples
Brenda J. Bradley et al.
CONSERVATION GENETICS (2001)
Logratio analysis and compositional distance
J Aitchison et al.
MATHEMATICAL GEOLOGY (2000)