相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。Biogeography and conservation of desert warthog Phacochoerus aethiopicus and common warthog Phacochoerus africanus (Artiodactyla: Suidae) in the Horn of Africa
Yvonne A. de Jong et al.
MAMMALIA (2023)
The Mutationathon highlights the importance of reaching standardization in estimates of pedigree-based germline mutation rates
Lucie A. Bergeron et al.
ELIFE (2022)
Revisiting the Evolutionary History of Pigs via De Novo Mutation Rate Estimation in A Three-generation Pedigree
Mingpeng Zhang et al.
GENOMICS PROTEOMICS & BIOINFORMATICS (2022)
Estimating divergence times from DNA sequences
Per Sjodin et al.
GENETICS (2021)
Cytokine Storm in Domestic Pigs Induced by Infection of Virulent African Swine Fever Virus
Shuchao Wang et al.
FRONTIERS IN VETERINARY SCIENCE (2021)
High genetic diversity and low differentiation reflect the ecological versatility of the African leopard
Patricia Pecnerova et al.
CURRENT BIOLOGY (2021)
Twelve years of SAMtools and BCFtools
Petr Danecek et al.
GIGASCIENCE (2021)
Interactive Tree Of Life (iTOL) v5: an online tool for phylogenetic tree display and annotation
Ivica Letunic et al.
NUCLEIC ACIDS RESEARCH (2021)
GenMap: ultra-fast computation of genome mappability
Christopher Pockrandt et al.
BIOINFORMATICS (2020)
Evaluation of model fit of inferred admixture proportions
Genis Garcia-Erill et al.
MOLECULAR ECOLOGY RESOURCES (2020)
Fossil suids from Bolt's Farm Palaeokarst System, South Africa: implications for the taxonomy of Potamochoeroides and Notochoerus and for biochronology
M. Pickford et al.
ESTUDIOS GEOLOGICOS-MADRID (2020)
Inhibition of African Swine Fever Virus Replication by Porcine Type I and Type II Interferons
Wenhui Fan et al.
FRONTIERS IN MICROBIOLOGY (2020)
Testing for Hardy-Weinberg equilibrium in structured populations using genotype or low-depth next generation sequencing data
Jonas Meisner et al.
MOLECULAR ECOLOGY RESOURCES (2019)
Genomic analysis on pygmy hog reveals extensive interbreeding during wild boar expansion
Langqing Liu et al.
NATURE COMMUNICATIONS (2019)
Fast and accurate relatedness estimation from high-throughput sequencing data in the presence of inbreeding
Kristian Hanghoj et al.
GIGASCIENCE (2019)
Large-scale ruminant genome sequencing provides insights into their evolution and distinct traits
Lei Chen et al.
SCIENCE (2019)
Mechanisms of African swine fever virus pathogenesis and immune evasion inferred from gene expression changes in infected swine macrophages
James J. Zhu et al.
PLOS ONE (2019)
Allele frequency-free inference of close familial relationships from genotypes or low-depth sequencing data
Ryan K. Waples et al.
MOLECULAR ECOLOGY (2019)
Porcine Mx1 Protein Inhibits Classical Swine Fever Virus Replication by Targeting Nonstructural Protein NS5B
Jing Zhou et al.
JOURNAL OF VIROLOGY (2018)
The evolutionary history of dogs in the Americas
Maire Ni Leathlobhair et al.
SCIENCE (2018)
Posterior Summarization in Bayesian Phylogenetics Using Tracer 1.7
Andrew Rambaut et al.
SYSTEMATIC BIOLOGY (2018)
A southern African origin and cryptic structure in the highly mobile plains zebra
Casper-Emil T. Pedersen et al.
NATURE ECOLOGY & EVOLUTION (2018)
NGmerge: merging paired-end reads via novel empirically-derived models of sequencing errors
John M. Gaspar
BMC BIOINFORMATICS (2018)
Evidence that RNA Viruses Drove Adaptive Introgression between Neanderthals and Modem Humans
David Enard et al.
CELL (2018)
Human B Cell Differentiation Is Characterized by Progressive Remodeling of O-Linked Glycans
Nicholas Giovannone et al.
FRONTIERS IN IMMUNOLOGY (2018)
Inferring Population Structure and Admixture Proportions in Low-Depth NGS Data
Jonas Meisner et al.
GENETICS (2018)
Southern African ancient genomes estimate modern human divergence to 350,000 to 260,000 years ago
Carina M. Sehlebusch et al.
SCIENCE (2017)
Prostaglandin E2 As a Modulator of Viral Infections
Willem J. Sander et al.
FRONTIERS IN PHYSIOLOGY (2017)
Visualizing spatial population structure with estimated effective migration surfaces
Desislava Petkova et al.
NATURE GENETICS (2016)
Introgression of Neandertal- and Denisovan-like Haplotypes Contributes to Adaptive Variation in Human Toll-like Receptors
Michael Dannemann et al.
AMERICAN JOURNAL OF HUMAN GENETICS (2016)
Genomic Signatures of Selective Pressures and Introgression from Archaic Hominins at Human Innate Immunity Genes
Matthieu Deschamps et al.
AMERICAN JOURNAL OF HUMAN GENETICS (2016)
MultiQC: summarize analysis results for multiple tools and samples in a single report
Philip Ewels et al.
BIOINFORMATICS (2016)
Genetic Adaptation and Neandertal Admixture Shaped the Immune System of Human Populations
Helene Quach et al.
CELL (2016)
Fossil Suidae (Artiodactyla, Mammalia) from Aves Cave I and nearby sites in Bolt's Farm Palaeokarst System, South Africa
M. Pickford et al.
ESTUDIOS GEOLOGICOS-MADRID (2016)
Next-generation biology: Sequencing and data analysis approaches for non-model organisms
Rute R. da Fonseca et al.
MARINE GENOMICS (2016)
Dating species divergences using rocks and clocks
Ziheng Yang et al.
PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2016)
The Evolution of Suidae
Laurent Frantz et al.
ANNUAL REVIEW OF ANIMAL BIOSCIENCES, VOL 4 (2016)
A decade of pig genome sequencing: a window on pig domestication and evolution
Martien A. M. Groenen
GENETICS SELECTION EVOLUTION (2016)
Evidence of long-term gene flow and selection during domestication from analyses of Eurasian wild and domestic pig genomes
Laurent A. F. Frantz et al.
NATURE GENETICS (2015)
Siaa2-3Galβ1-Receptor Genetic Variants Are Associated with Influenza A(H1N1)pdm09 Severity
Alvino Maestri et al.
PLOS ONE (2015)
Evaluating the Use of ABBA-BABA Statistics to Locate Introgressed Loci
Simon H. Martin et al.
MOLECULAR BIOLOGY AND EVOLUTION (2015)
ANGSD: Analysis of Next Generation Sequencing Data
Thorfinn Sand Korneliussen et al.
BMC BIOINFORMATICS (2014)
The genomic landscape of Neanderthal ancestry in present-day humans
Sriram Sankararaman et al.
NATURE (2014)
Natural selection and infectious disease in human populations
Elinor K. Karlsson et al.
NATURE REVIEWS GENETICS (2014)
Evolution of early Homo: An integrated biological perspective
Susan C. Anton et al.
SCIENCE (2014)
Calculation of Tajima's D and other neutrality test statistics from low depth next-generation sequencing data
Thorfinn Sand Korneliussen et al.
BMC BIOINFORMATICS (2013)
DETECTING RANGE EXPANSIONS FROM GENETIC DATA
Benjamin M. Peter et al.
EVOLUTION (2013)
Estimating Individual Admixture Proportions from Next Generation Sequencing Data
Line Skotte et al.
GENETICS (2013)
Estimating and interpreting FST: The impact of rare variants
Gaurav Bhatia et al.
GENOME RESEARCH (2013)
A new role for mucins in immunity: Insights from gastrointestinal nematode infection
Sumaira Z. Hasnain et al.
INTERNATIONAL JOURNAL OF BIOCHEMISTRY & CELL BIOLOGY (2013)
Adaptive introgression in animals: examples and comparison to new mutation and standing variation as sources of adaptive variation
Philip W. Hedrick
MOLECULAR ECOLOGY (2013)
Recalibrating Equus evolution using the genome sequence of an early Middle Pleistocene horse
Ludovic Orlando et al.
NATURE (2013)
Mx Proteins: Antiviral Gatekeepers That Restrain the Uninvited
Judith Verhelst et al.
MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS (2013)
Review of the sylvatic cycle of African swine fever in sub-Saharan Africa and the Indian ocean
F. Jori et al.
VIRUS RESEARCH (2013)
Robust Demographic Inference from Genomic and SNP Data
Laurent Excoffier et al.
PLOS GENETICS (2013)
Genome sequencing reveals fine scale diversification and reticulation history during speciation in Sus
Laurent A. F. Frantz et al.
GENOME BIOLOGY (2013)
Generation length for mammals
Moreno Di Marco et al.
Nature Conservation-Bulgaria (2013)
Pattern and timing of diversification of Cetartiodactyla (Mammalia, Laurasiatheria), as revealed by a comprehensive analysis of mitochondrial genomes
Alexandre Hassanin et al.
COMPTES RENDUS BIOLOGIES (2012)
Ancient Admixture in Human History
Nick Patterson et al.
GENETICS (2012)
Comparative phylogeography of African savannah ungulates
E. D. Lorenzen et al.
MOLECULAR ECOLOGY (2012)
Analyses of pig genomes provide insight into porcine demography and evolution
Martien A. M. Groenen et al.
NATURE (2012)
Inference of Population Splits and Mixtures from Genome-Wide Allele Frequency Data
Joseph K. Pickrell et al.
PLOS GENETICS (2012)
Prostaglandins and Inflammation
Emanuela Ricciotti et al.
ARTERIOSCLEROSIS THROMBOSIS AND VASCULAR BIOLOGY (2011)
Inference of human population history from individual whole-genome sequences
Heng Li et al.
NATURE (2011)
Rethinking the evolution of extant sub-Saharan African suids (Suidae, Artiodactyla)
Jaime Gongora et al.
ZOOLOGICA SCRIPTA (2011)
Fast and accurate long-read alignment with Burrows-Wheeler transform
Heng Li et al.
BIOINFORMATICS (2010)
The Genome Analysis Toolkit: A MapReduce framework for analyzing next-generation DNA sequencing data
Aaron McKenna et al.
GENOME RESEARCH (2010)
THE FOSSIL SUIDS OF THE TRANSVAAL CAVES
R. F. EWER
PROCEEDINGS OF THE ZOOLOGICAL SOCIETY OF LONDON (2010)
A Draft Sequence of the Neandertal Genome
Richard E. Green et al.
SCIENCE (2010)
The Sequence Alignment/Map format and SAMtools
Heng Li et al.
BIOINFORMATICS (2009)
African Swine Fever Virus Blocks the Host Cell Antiviral Inflammatory Response through a Direct Inhibition of PKC-θ-Mediated p300 Transactivation
Aitor G. Granja et al.
JOURNAL OF VIROLOGY (2009)
Inhibition of a Large Double-Stranded DNA Virus by MxA Protein
Christopher L. Netherton et al.
JOURNAL OF VIROLOGY (2009)
African swine fever: how can global spread be prevented?
Solenne Costard et al.
PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2009)
Jakmip1 Is Expressed upon T Cell Differentiation and Has an Inhibitory Function in Cytotoxic T Lymphocytes
Valentina Libri et al.
JOURNAL OF IMMUNOLOGY (2008)
Population phylogenomic analysis of mitochondrial DNA in wild boars and domestic pigs revealed multiple domestication events in East Asia
Gui-Sheng Wu et al.
GENOME BIOLOGY (2007)
Regional genetic structuring and evolutionary history of the impala Aepyceros melampus
ED Lorenzen et al.
JOURNAL OF HEREDITY (2006)
Fc gamma receptors: Old friends and new family members
F Nimmerjahn et al.
IMMUNITY (2006)
Genetic consequences of climatic oscillations in the Quaternary
GM Hewitt
PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2004)
Genome-wide search and identification of a novel gel-forming mucin MUC19/Muc19 in glandular tissues
Y Chen et al.
AMERICAN JOURNAL OF RESPIRATORY CELL AND MOLECULAR BIOLOGY (2004)
Phylogeography and population structure of the common warthog (Phacochoerus africanus) inferred from variation in mitochondrial DNA sequences and microsatellite loci
VB Muwanika et al.
HEREDITY (2003)
Mutation rates in mammalian genomes
S Kumar et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2002)
Dietary adaptations of extant and Neogene African suids
JM Harris et al.
JOURNAL OF ZOOLOGY (2002)
Evidence of two genetically deeply divergent species of warthog, Phacochoerus africanus and P-aethiopicus (Artiodactyla : Suiformes) in East Africa
E Randi et al.
MAMMALIAN BIOLOGY (2002)