相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。Oxygen and nitrogen production by an ammonia-oxidizing archaeon
Beate Kraft et al.
SCIENCE (2022)
Insight into the structure and metabolic function of iron-rich nanoparticles in anammox bacteria
Meng-Wen Peng et al.
SCIENCE OF THE TOTAL ENVIRONMENT (2022)
Anaerobic ammonium oxidation coupled to Fe(III) reduction: Discovery, mechanism and application prospects in wastewater treatment
Liuyang Wan et al.
SCIENCE OF THE TOTAL ENVIRONMENT (2022)
Site-and-branch-heterogeneous analyses of an expanded dataset favour mitochondria as sister to known Alphaproteobacteria
Sergio A. Munoz-Gomez et al.
NATURE ECOLOGY & EVOLUTION (2022)
Using modern low-oxygen marine ecosystems to understand the nitrogen cycle of the Paleo- and Mesoproterozoic oceans
Clara A. Fuchsman et al.
ENVIRONMENTAL MICROBIOLOGY (2021)
A promising destiny for Feammox: From biogeochemical ammonium oxidation to wastewater treatment
Jiaxuan Zhu et al.
SCIENCE OF THE TOTAL ENVIRONMENT (2021)
Using Fe(II)/Fe(III) as catalyst to drive a novel anammox process with no need of anammox bacteria
Yafei Yang et al.
WATER RESEARCH (2021)
Dating Alphaproteobacteria evolution with eukaryotic fossils
Sishuo Wang et al.
NATURE COMMUNICATIONS (2021)
Structural and functional characterization of the intracellular filament-forming nitrite oxidoreductase multiprotein complex
Tadeo Moreno Chicano et al.
NATURE MICROBIOLOGY (2021)
Radiation of nitrogen-metabolizing enzymes across the tree of life tracks environmental transitions in Earth history
Chris Parsons et al.
GEOBIOLOGY (2021)
N2O emission in partial nitritation-anammox process
Li Li et al.
CHINESE CHEMICAL LETTERS (2020)
CDD/SPARCLE: the conserved domain database in 2020
Shennan Lu et al.
NUCLEIC ACIDS RESEARCH (2020)
Ecological niche differentiation among anammox bacteria
Lei Zhang et al.
WATER RESEARCH (2020)
Metagenomics reveals microbial community differences lead to differential nitrate production in anammox reactors with differing nitrogen loading rates
Wei Li et al.
WATER RESEARCH (2020)
Extracellular electron transfer-dependent anaerobic oxidation of ammonium by anammox bacteria
Dario R. Shaw et al.
NATURE COMMUNICATIONS (2020)
Evolutionary Timeline and Genomic Plasticity Underlying the Lifestyle Diversity in Rhizobiales
Sishuo Wang et al.
MSYSTEMS (2020)
GeneRax: A Tool for Species-Tree-Aware Maximum Likelihood-Based Gene Family Tree Inference under Gene Duplication, Transfer, and Loss
Benoit Morel et al.
MOLECULAR BIOLOGY AND EVOLUTION (2020)
ape 5.0: an environment for modern phylogenetics and evolutionary analyses in R
Emmanuel Paradis et al.
BIOINFORMATICS (2019)
Distribution of reactive oxygen species defense mechanisms across domain bacteria
Lisa A. Johnson et al.
FREE RADICAL BIOLOGY AND MEDICINE (2019)
Limited oxygen production in the Mesoarchean ocean
Frantz Ossa Ossa et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2019)
Nitric oxide-dependent anaerobic ammonium oxidation
Ziye Hu et al.
NATURE COMMUNICATIONS (2019)
Thinking twice about the evolution of photosynthesis
Tanai Cardona
OPEN BIOLOGY (2019)
Nitrogen Oxide Concentrations in Natural Waters on Early Earth
Sukrit Ranjan et al.
GEOCHEMISTRY GEOPHYSICS GEOSYSTEMS (2019)
Phylogenomics suggests oxygen availability as a driving force in Thaumarchaeota evolution
Minglei Ren et al.
ISME JOURNAL (2019)
Ammonium availability in the Late Archaean nitrogen cycle
J. Yang et al.
NATURE GEOSCIENCE (2019)
Interactive Tree Of Life (iTOL) v4: recent updates and new developments
Ivica Letunic et al.
NUCLEIC ACIDS RESEARCH (2019)
A 192-heme electron transfer network in the hydrazine dehydrogenase complex
M. Akram et al.
SCIENCE ADVANCES (2019)
Nitrogen isotope evidence for stepwise oxygenation of the ocean during the Great Oxidation Event
Chen Cheng et al.
GEOCHIMICA ET COSMOCHIMICA ACTA (2019)
Global Distribution of Anaerobic Ammonia Oxidation (Anammox) Bacteria - Field Surveys in Wetland, Dryland, Groundwater Aquifer and Snow
Yu Wang et al.
FRONTIERS IN MICROBIOLOGY (2019)
Using the Fossil Record to Evaluate Timetree Timescales
Charles R. Marshall
FRONTIERS IN GENETICS (2019)
Anaerobic nitrogen cycling on a Neoarchaean ocean margin
C. Mettam et al.
EARTH AND PLANETARY SCIENCE LETTERS (2019)
The Pfam protein families database in 2019
Sara El-Gebali et al.
NUCLEIC ACIDS RESEARCH (2019)
InterPro in 2019: improving coverage, classification and access to protein sequence annotations
Alex L. Mitchell et al.
NUCLEIC ACIDS RESEARCH (2019)
Nitrogen isotope evidence for anoxic deep marine environments from the Mesoarchean Mosquito Creek Formation, Australia
Matthew C. Koehler et al.
PRECAMBRIAN RESEARCH (2019)
Modeling Site Heterogeneity with Posterior Mean Site Frequency Profiles Accelerates Accurate Phylogenomic Estimation
Huai-Chun Wang et al.
SYSTEMATIC BIOLOGY (2018)
Simultaneous Fe(III) reduction and ammonia oxidation process in Anammox sludge
Xiang Li et al.
JOURNAL OF ENVIRONMENTAL SCIENCES (2018)
Microbial life and biogeochemical cycling on land 3,220 million years ago
Martin Homann et al.
NATURE GEOSCIENCE (2018)
Transient surface ocean oxygenation recorded in the ∼2.66-Ga Jeerinah Formation, Australia
Matthew C. Koehler et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2018)
Using Phylogenomic Data to Explore the Effects of Relaxed Clocks and Calibration Strategies on Divergence Time Estimation: Primates as a Test Case
Mario Dos Reis et al.
SYSTEMATIC BIOLOGY (2018)
Ecological control of nitrite in the upper ocean
Emily J. Zakem et al.
NATURE COMMUNICATIONS (2018)
Nitrogen fixation sustained productivity in the wake of the Palaeoproterozoic Great Oxygenation Event
Genming Luo et al.
NATURE COMMUNICATIONS (2018)
Pervasive aerobic nitrogen cycling in the surface ocean across the Paleoproterozoic Era
Michael A. Kipp et al.
EARTH AND PLANETARY SCIENCE LETTERS (2018)
Nitrous oxide from chemodenitrification: A possible missing link in the Proterozoic greenhouse and the evolution of aerobic respiration
Chloe L. Stanton et al.
GEOBIOLOGY (2018)
Ladderane phospholipids form a densely packed membrane with normal hydrazine and anomalously low proton/hydroxide permeability
Frank R. Moss et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2018)
Integrated genomic and fossil evidence illuminates life's early evolution and eukaryote origin
Holly C. Betts et al.
NATURE ECOLOGY & EVOLUTION (2018)
Distribution and phylogeny of anaerobic ammonium-oxidizing (anammox) bacteria in the water column of the central Pacific Ocean
Koji Hamasaki et al.
DEEP-SEA RESEARCH PART II-TOPICAL STUDIES IN OCEANOGRAPHY (2018)
Ammonia oxidation: Ecology, physiology, biochemistry and why they must all come together
Laura E. Lehtovirta-Morley
FEMS MICROBIOLOGY LETTERS (2018)
N2 production rates limited by nitrite availability in the Bay of Bengal oxygen minimum zone
L. A. Bristow et al.
NATURE GEOSCIENCE (2017)
Onset of the aerobic nitrogen cycle during the Great Oxidation Event
Aubrey L. Zerkle et al.
NATURE (2017)
ModelFinder: fast model selection for accurate phylogenetic estimates
Subha Kalyaanamoorthy et al.
NATURE METHODS (2017)
Early photosynthetic eukaryotes inhabited low-salinity habitats
Patricia Sanchez-Baracaldo et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2017)
Origin of microbial biomineralization and magnetotaxis during the Archean
Wei Lin et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2017)
Microbial competition among anammox bacteria in nitrite-limited bioreactors
Lei Zhang et al.
WATER RESEARCH (2017)
Recovery of nearly 8,000 metagenome-assembled genomes substantially expands the tree of life
Donovan H. Parks et al.
NATURE MICROBIOLOGY (2017)
Nitrogen Oxides in Early Earth's Atmosphere as Electron Acceptors for Life's Emergence
Michael L. Wong et al.
ASTROBIOLOGY (2017)
A warm or a cold early Earth? New insights from a 3-D climate-carbon model
Benjamin Charnay et al.
EARTH AND PLANETARY SCIENCE LETTERS (2017)
Iron formations: A global record of Neoarchaean to Palaeoproterozoic environmental history
K. O. Konhauser et al.
EARTH-SCIENCE REVIEWS (2017)
Bayesian molecular clock dating of species divergences in the genomics era
Mario dos Reis et al.
NATURE REVIEWS GENETICS (2016)
The Transporter Classification Database (TCDB): recent advances
Milton H. Saier et al.
NUCLEIC ACIDS RESEARCH (2016)
Interpretation of the nitrogen isotopic composition of Precambrian sedimentary rocks: Assumptions and perspectives
M. Ader et al.
CHEMICAL GEOLOGY (2016)
The nitrogen cycle
Lisa Y. Stein et al.
CURRENT BIOLOGY (2016)
The evolution of Earth's biogeochemical nitrogen cycle
Eva E. Stueken et al.
EARTH-SCIENCE REVIEWS (2016)
Ecology and physiology of anaerobic ammonium oxidizing bacteria
Mamoru Oshiki et al.
ENVIRONMENTAL MICROBIOLOGY (2016)
Manganese mineralogy and diagenesis in the sedimentary rock record
Jena E. Johnson et al.
GEOCHIMICA ET COSMOCHIMICA ACTA (2016)
Anammox Biochemistry: a Tale of Heme c Proteins
Boran Kartal et al.
TRENDS IN BIOCHEMICAL SCIENCES (2016)
Nitrogen cycling in the secondary nitrite maximum of the eastern tropical North Pacific off Costa Rica
Carolyn Buchwald et al.
GLOBAL BIOGEOCHEMICAL CYCLES (2015)
Isotopic evidence for biological nitrogen fixation by molybdenum-nitrogenase from 3.2 Gyr
Eva E. Stueeken et al.
NATURE (2015)
The inner workings of the hydrazine synthase multiprotein complex
Andreas Dietl et al.
NATURE (2015)
Benthic perspective on Earth's oldest evidence for oxygenic photosynthesis
Stefan V. Lalonde et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2015)
IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies
Lam-Tung Nguyen et al.
MOLECULAR BIOLOGY AND EVOLUTION (2015)
Fast start-up of Anammox process with appropriate ferrous iron concentration
Zhen Bi et al.
BIORESOURCE TECHNOLOGY (2014)
Ocean redox structure across the Late Neoproterozoic Oxygenation Event: A nitrogen isotope perspective
Magali Ader et al.
EARTH AND PLANETARY SCIENCE LETTERS (2014)
The rise of oxygen in Earth's early ocean and atmosphere
Timothy W. Lyons et al.
NATURE (2014)
Biogeography of anaerobic ammonia-oxidizing (anammox) bacteria
Puntipar Sonthiphand et al.
FRONTIERS IN MICROBIOLOGY (2014)
MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
Kazutaka Katoh et al.
MOLECULAR BIOLOGY AND EVOLUTION (2013)
Atmospheric oxygenation three billion years ago
Sean A. Crowe et al.
NATURE (2013)
Nitrogen isotope effects induced by anammox bacteria
Benjamin Brunner et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2013)
Hydrazine Synthase, a Unique Phylomarker with Which To Study the Presence and Biodiversity of Anammox Bacteria
Harry R. Harhangi et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2012)
Anammox and denitrification in the oxygen minimum zone of the eastern South Pacific
Tage Dalsgaard et al.
LIMNOLOGY AND OCEANOGRAPHY (2012)
Presence and detection of anaerobic ammonium-oxidizing (anammox) bacteria and appraisal of anammox process for high-strength nitrogenous wastewater treatment: a review
Akihiko Terada et al.
CLEAN TECHNOLOGIES AND ENVIRONMENTAL POLICY (2011)
Ferruginous Conditions: A Dominant Feature of the Ocean through Earth's History
Simon W. Poulton et al.
ELEMENTS (2011)
Approximate Likelihood Calculation on a Phylogeny for Bayesian Estimation of Divergence Times
Mario dos Reis et al.
MOLECULAR BIOLOGY AND EVOLUTION (2011)
Molecular mechanism of anaerobic ammonium oxidation
Boran Kartal et al.
NATURE (2011)
N2O emission from a partial nitrification-anammox process and identification of a key biological process of N2O emission from anammox granules
Satoshi Okabe et al.
WATER RESEARCH (2011)
Spatial variability in oceanic redox structure 1.8 billion years ago
Simon W. Poulton et al.
NATURE GEOSCIENCE (2010)
The Evolution and Future of Earth's Nitrogen Cycle
Donald E. Canfield et al.
SCIENCE (2010)
Tracking Euxinia in the Ancient Ocean: A Multiproxy Perspective and Proterozoic Case Study
Timothy W. Lyons et al.
ANNUAL REVIEW OF EARTH AND PLANETARY SCIENCES (2009)
trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses
Salvador Capella-Gutierrez et al.
BIOINFORMATICS (2009)
A comparative genomics study of genetic products potentially encoding ladderane lipid biosynthesis
Jayne E. Rattray et al.
BIOLOGY DIRECT (2009)
A Major Clade of Prokaryotes with Ancient Adaptations to Life on Land
Fabia U. Battistuzzi et al.
MOLECULAR BIOLOGY AND EVOLUTION (2009)
The cycling and redox state of nitrogen in the Archaean ocean
Linda V. Godfrey et al.
NATURE GEOSCIENCE (2009)
Isotopic Evidence for an Aerobic Nitrogen Cycle in the Latest Archean
Jessica Garvin et al.
SCIENCE (2009)
Was nitric oxide the first deep electron sink?
Anne-Lise Ducluzeau et al.
TRENDS IN BIOCHEMICAL SCIENCES (2009)
Empirical profile mixture models for phylogenetic reconstruction
Le Si Quang et al.
BIOINFORMATICS (2008)
A whiff of oxygen before the Great Oxidation Event?
Ariel D. Anbar et al.
SCIENCE (2007)
PAML 4: Phylogenetic analysis by maximum likelihood
Ziheng Yang
MOLECULAR BIOLOGY AND EVOLUTION (2007)
Bayesian estimation of species divergence times under a molecular clock using multiple fossil calibrations with soft bounds
ZH Yang et al.
MOLECULAR BIOLOGY AND EVOLUTION (2006)
Critical roles of bacterioferritins in iron storage and proliferation of cyanobacteria
N Keren et al.
PLANT PHYSIOLOGY (2004)
Candidatus Scalindua brodae, sp nov., Candidatus Scalindua wagneri, sp nov., two new species of anaerobic ammonium oxidizing bacteria
M Schmid et al.
SYSTEMATIC AND APPLIED MICROBIOLOGY (2003)
Estimating absolute rates of molecular evolution and divergence times: A penalized likelihood approach
MJ Sanderson
MOLECULAR BIOLOGY AND EVOLUTION (2002)
Microbiology and application of the anaerobic ammonium oxidation ('anammox') process
MSM Jetten et al.
CURRENT OPINION IN BIOTECHNOLOGY (2001)
Iron and metal regulation in bacteria
K Hantke
CURRENT OPINION IN MICROBIOLOGY (2001)
The SHARON((R))-Anammox((R)) process for treatment of ammonium rich wastewater
U van Dongen et al.
WATER SCIENCE AND TECHNOLOGY (2001)
TIGRFAMs: a protein family resource for the functional identification of proteins
DH Haft et al.
NUCLEIC ACIDS RESEARCH (2001)
KEGG: Kyoto Encyclopedia of Genes and Genomes
M Kanehisa et al.
NUCLEIC ACIDS RESEARCH (2000)
分享论文
