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Lisa M. Lumley et al.
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Jullien M. Flynn et al.
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Giovanny Fagua et al.
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Bryan M. T. Brunet et al.
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Canu: scalable and accurate long-read assembly via adaptive k-mer weighting and repeat separation
Sergey Koren et al.
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Foreign DNA acquisition by invertebrate genomes
J. -M. Drezen et al.
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Gwylim S. Blackburn et al.
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High-quality genome (re) assembly using chromosomal contact data
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Joshua N. Burton et al.
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Fast and accurate short read alignment with Burrows-Wheeler transform
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Synteny and chromosome evolution in the lepidoptera:: Evidence from mapping in Heliconius melpomene
Elizabeth G. Pringle et al.
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Transcription of antifreeze protein genes in Choristoneura fumiferana
W. Qin et al.
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OrthoMCL: Identification of ortholog groups for eukaryotic genomes
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É Bauce et al.
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