4.8 Article

Efficient and universal characterization of atomic structures through a topological graph order parameter

期刊

NPJ COMPUTATIONAL MATERIALS
卷 8, 期 1, 页码 -

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NATURE PORTFOLIO
DOI: 10.1038/s41524-022-00717-7

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  1. Laboratory Directed Research and Development (LDRD) program at Lawrence Livermore National Laboratory [20-SI-004]
  2. US Department of Energy by Lawrence Livermore National Laboratory [DE-AC52-07NA27344]

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In this study, a graph-based order parameter is introduced for the characterization of atomistic structures. The order parameter is universal and transferable to different structural geometries, outperforming existing methods in classifying atomistic structures and opening up possibilities for fine structure-level characterization.
A graph-based order parameter, based on the topology of the graph itself, is introduced for the characterization of atomistic structures. The order parameter is universal to any material/chemical system and is transferable to all structural geometries. Four sets of data are used to validate both the generalizability and accuracy of the algorithm: (1) liquid lithium configurations spanning up to 300 GPa, (2) condensed phases of carbon along with nanotubes and buckyballs at ambient and high temperature, (3) a diverse set of aluminum configurations including surfaces, compressed and expanded lattices, point defects, grain boundaries, liquids, nanoparticles, all at nonzero temperatures, and (4) eleven niobium oxide crystal phases generated with ab initio molecular dynamics. We compare our proposed method to existing, state-of-the-art methods for the cases of aluminum and niobium oxide. Our order parameter uniquely classifies every configuration and outperforms all studied existing methods, opening the door for its use in a multitude of complex application spaces that can require fine structure-level characterization of atomistic graphs.

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