4.5 Article

Demonstrating the viability of Lagrangian in situ reduction on supercomputers

期刊

JOURNAL OF COMPUTATIONAL SCIENCE
卷 61, 期 -, 页码 -

出版社

ELSEVIER
DOI: 10.1016/j.jocs.2022.101615

关键词

Lagrangian analysis; Data reduction; Computational fluid dynamics

资金

  1. Exascale Computing Project [17-SC-20-SC]
  2. U.S. Department of Energy Office of Science [DE-AC05-00OR22725]
  3. National Nuclear Security Administration [P41 GM103545, R24 GM136986]
  4. Office of Science of the U.S. Department of Energy [DE-FE0031880]
  5. Intel Graphics and Visualization Institutes of XeLLENCE
  6. National Institutes of Health
  7. Department of Energy

向作者/读者索取更多资源

This study evaluates the viability and effectiveness of Lagrangian analysis for reducing data in large-scale computational science applications. By exploring cosmology, seismology, and hydrodynamics applications, as well as conducting performance benchmarking in different environments, we demonstrate that Lagrangian analysis can significantly reduce data while maintaining accurate reconstruction, with minimal impact on total execution time.
Performing exploratory analysis and visualization of large-scale time-varying computational science applications is challenging due to inaccuracies that arise from under-resolved data. In recent years, Lagrangian representations of the vector field computed using in situ processing are being increasingly researched and have emerged as a potential solution to enable exploration. However, prior works have offered limited estimates of the encumbrance on the simulation code as they consider theoreticalin situ environments. Further, the effectiveness of this approach varies based on the nature of the vector field, benefitting from an indepth investigation for each application area. With this study, an extended version of Sane et al. (2021), we contribute an evaluation of Lagrangian analysis viability and efficacy for simulation codes executing at scale on a supercomputer. We investigated previously unexplored cosmology and seismology applications as well as conducted a performance benchmarking study by using a hydrodynamics mini-application targeting exascale computing. To inform encumbrance, we integrated in situ infrastructure with simulation codes, and evaluated Lagrangian in situ reduction in representative homogeneous and heterogeneous HPC environments. To inform post hoc accuracy, we conducted a statistical analysis across a range of spatiotemporal configurations as well as a qualitative evaluation. Additionally, our study contributes cost estimates for distributed-memory post hoc reconstruction. In all, we demonstrate viability for each application - data reduction to less than 1% of the total data via Lagrangian representations, while maintaining accurate reconstruction and requiring under 10% of total execution time in over 90% of our experiments.

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