4.8 Article

The biology of C. richardii as a tool to understand plant evolution

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Plant Sciences

Ceratopteris chunii and Ceratopteris chingii (Pteridaceae), two new diploid species from China, based on morphological, cytological, and molecular data

Jun-Hao Yu et al.

Summary: This study describes and illustrates two new cryptic species of Ceratopteris, namely Ceratopteris chunii and Ceratopteris chingii. Phylogenetic analysis and chromosome studies reveal morphological and chromosomal differences between these two species and their relatives, providing important insights into the origin of Ceratopteris polyploids in Asia.

PLANT DIVERSITY (2022)

Article Plant Sciences

Insights into the evolutionary history and widespread occurrence of antheridiogen systems in ferns

Ondrej Hornych et al.

Summary: Sex expression in homosporous ferns is controlled by multiple factors, with one being the antheridiogen system. The response to antheridiogens varies among species, with approximately 65% of the studied species showing a response. The evolution and impact of antheridiogens on polyploidy and apomixis remain topics for further research.

NEW PHYTOLOGIST (2021)

Article Plant Sciences

R2R3-MYB Gene Evolution in Plants, Incorporating Ferns into the Story

Brenda Hernandez-Hernandez et al.

Summary: The study found that R2R3-MYBs in seed plants are more diverse than in any other major lineage of vascular plants, with most well-supported clades inferred to be present in the ancestor of land plants. Ferns have numerous copies of R2R3-MYBs, though fewer than seed plants. Protein motif analyses revealed highly conserved R2R3-MYB motifs across land plants.

INTERNATIONAL JOURNAL OF PLANT SCIENCES (2021)

Article Plant Sciences

A drought-driven model for the evolution of obligate apomixis in ferns: evidence from pellaeids (Pteridaceae)

Amanda L. Grusz et al.

Summary: The research synthesizes studies of apomixis in ferns and presents a six-stage model for the evolution of obligate apomixis. It highlights the role played by drought and associated abiotic conditions in the establishment of this reproductive strategy, with an increase in the frequency of apomixis observed among taxa inhabiting dry North American deserts. The findings reinforce the strong association between abiotic factors, particularly water limitation, and obligate apomixis in ferns.

AMERICAN JOURNAL OF BOTANY (2021)

Article Evolutionary Biology

A De Novo Transcriptome Assembly of Ceratopteris richardii Provides Insights into the Evolutionary Dynamics of Complex Gene Families in Land Plants

Yuan Geng et al.

Summary: Ferns, as the closest extant sister group to seed plants, are crucial for researching the origin and evolution of plant genes and traits. By generating the transcriptome of Ceratopteris and analyzing orthogroups across various plant species, this study uncovered the evolutionary dynamics within euphyllophytes and identified proteins associated with major shifts in plant morphology and physiology. Additionally, the resource was used to classify GRAS domain transcriptional regulators and analyze the conservation and diversification of GRAS family members in ferns and seed plants. This transcriptome database provides a valuable platform for exploring gene family evolution in land plants and studying gene function in seed-free vascular plants.

GENOME BIOLOGY AND EVOLUTION (2021)

Editorial Material Plant Sciences

Bryophytes are not early diverging land plants

Stuart F. McDaniel

Summary: The author suggests that certain terminology commonly used in plant systematics may lead to misunderstandings in interpreting phylogenetic trees, and advocates for utilizing a clear framework, such as tree thinking, to enhance understanding of phylogenies across different sub-disciplines of biology.

NEW PHYTOLOGIST (2021)

Article Multidisciplinary Sciences

Underwater CAM photosynthesis elucidated by Isoetes genome

David Wickell et al.

Summary: Despite the extensive characterization of crassulacean acid metabolism (CAM) in terrestrial angiosperms, little attention has been given to aquatics and early diverging land plants. Here, the authors assemble the genome of Isoetes taiwanensis and investigate the genetic factors driving CAM in this aquatic lycophyte. Despite broad similarities between CAM in Isoetes and terrestrial angiosperms, several key differences are identified, including the recruitment of 'bacterial-type' PEPC and diverged circadian control of key CAM pathway genes in Isoetes.

NATURE COMMUNICATIONS (2021)

Review Plant Sciences

Charting the genomic landscape of seed-free plants

Peter Szovenyi et al.

Summary: This review summarizes the available and missing reference genomes in seed-free plant lineages, compares the genomic and epigenomic features between seed-free and seed plants, and highlights the model systems of seed-free plants.

NATURE PLANTS (2021)

Article Developmental Biology

An ontogenetic framework for functional studies in the model fern Ceratopteris richardii

Stephanie J. Conway et al.

DEVELOPMENTAL BIOLOGY (2020)

Review Plant Sciences

Considerations in adapting CRISPR/Cas9 in nongenetic model plant systems

Shengchen Shan et al.

APPLICATIONS IN PLANT SCIENCES (2020)

Article Biochemistry & Molecular Biology

Cryptic diversity in the model fern genus Ceratopteris (Pteridaceae)

Sylvia P. Kinosian et al.

MOLECULAR PHYLOGENETICS AND EVOLUTION (2020)

Article Plant Sciences

There and Back Again: Reticulate Evolution in Ceratopteris

Sylvia P. Kinosian et al.

AMERICAN FERN JOURNAL (2020)

Article Plant Sciences

Ferns with Benefits: Incorporating Ceratopteris into the Genomics Era

D. Blaine Marchant

AMERICAN FERN JOURNAL (2019)

Article Multidisciplinary Sciences

Extreme haplotype variation in the desiccation-tolerant clubmoss Selaginella lepidophylla

Robert VanBuren et al.

NATURE COMMUNICATIONS (2018)

Article Plant Sciences

Fern genomes elucidate land plant evolution and cyanobacterial symbioses

Fay-Wei Li et al.

NATURE PLANTS (2018)

Review Plant Sciences

A current perspective on apomixis in ferns

Amanda L. Grusz

JOURNAL OF SYSTEMATICS AND EVOLUTION (2016)

Article Plant Sciences

A community-derived classification for extant lycophytes and ferns

Eric Schuettpelz et al.

JOURNAL OF SYSTEMATICS AND EVOLUTION (2016)

Article Biochemical Research Methods

Protocol: genetic transformation of the fern Ceratopteris richardii through microparticle bombardment

Andrew R. G. Plackett et al.

PLANT METHODS (2015)

Article Biology

New opportunities at the wild frontier

Jane Alfred et al.

Review Plant Sciences

Ferns: the missing link in shoot evolution and development

Andrew R. G. Plackett et al.

FRONTIERS IN PLANT SCIENCE (2015)

Review Biology

Between Two Fern Genomes

Emily B. Sessa et al.

GIGASCIENCE (2014)

Article Plant Sciences

Molecular evidence for natural hybridization in the mangrove fern genus Acrostichum

Rongshu Zhang et al.

BMC PLANT BIOLOGY (2013)

Article Plant Sciences

Stable Transformation of Ferns Using Spores as Targets: Pteris vittata and Ceratopteris thalictroides

Balasubramaniam Muthukumar et al.

PLANT PHYSIOLOGY (2013)

Review Plant Sciences

The evolution, morphology, and development of fern leaves

Alejandra Vasco et al.

FRONTIERS IN PLANT SCIENCE (2013)

Review Plant Sciences

Microspore embryogenesis: establishment of embryo identity and pattern in culture

Mercedes Soriano et al.

PLANT REPRODUCTION (2013)

Article Plant Sciences

DECIPHERING THE ORIGINS OF APOMICTIC POLYPLOIDS IN THE CHEILANTHES YAVAPENSIS COMPLEX (PTERIDACEAE)

Amanda L. Grusz et al.

AMERICAN JOURNAL OF BOTANY (2009)

Article Plant Sciences

Three Forms of Ceratopteris Thalictroides in Guam

Shigeo Masuyama et al.

AMERICAN FERN JOURNAL (2008)

Article Multidisciplinary Sciences

The Physcomitrella genome reveals evolutionary insights into the conquest of land by plants

Stefan A. Rensing et al.

SCIENCE (2008)

Article Plant Sciences

Apogamy induction in Ceratopteris richardii

Angela R. Cordle et al.

INTERNATIONAL JOURNAL OF PLANT SCIENCES (2007)

Article Plant Sciences

Independent origins of tetraploid cryptic species in the fern Ceratopteris thalictroides

Bayu Adjie et al.

JOURNAL OF PLANT RESEARCH (2007)

Review Genetics & Heredity

The moss Physcomitrella patens

D Cove

ANNUAL REVIEW OF GENETICS (2005)

Article Biochemistry & Molecular Biology

Phylogenetics in Caenorhabditis elegans:: An analysis of divergence and outcrossing

DR Denver et al.

MOLECULAR BIOLOGY AND EVOLUTION (2003)

Article Biochemistry & Molecular Biology

Ectopic expression of BABY BOOM triggers a conversion from vegetative to embryonic growth

K Boutilier et al.

PLANT CELL (2002)

Article Plant Sciences

Heteroblastic root development in Ceratopteris richardii (Parkeriaceae)

GC Hou et al.

INTERNATIONAL JOURNAL OF PLANT SCIENCES (2002)