4.7 Article

Novel functional insights into a modified sugar-binding protein from Synechococcus MITS9220

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Biochemistry & Molecular Biology

Cyanorak v2.1: a scalable information system dedicated to the visualization and expert curation of marine and brackish picocyanobacteria genomes

Laurence Garczarek et al.

Summary: Cyanorak v2.1 is an information system dedicated to visualizing, comparing and curating the genomes of Prochlorococcus, Synechococcus and Cyanobium. It provides rich functional annotations, various data export options and serves as an invaluable tool for comparative genomics of ecologically relevant marine microorganisms.

NUCLEIC ACIDS RESEARCH (2021)

Article Biochemistry & Molecular Biology

PubChem in 2021: new data content and improved web interfaces

Sunghwan Kim et al.

Summary: PubChem, a popular chemical information resource, has made substantial improvements in the past two years by adding data from over 100 new sources, updating its homepage and record pages, introducing new services like the Periodic Table and Pathway pages, and creating a special data collection related to COVID-19 and SARS-CoV-2 in response to the pandemic.

NUCLEIC ACIDS RESEARCH (2021)

Article Biochemistry & Molecular Biology

DALI and the persistence of protein shape

Liisa Holm

PROTEIN SCIENCE (2020)

Review Microbiology

Tara Oceans: towards global ocean ecosystems biology

Shinichi Sunagawa et al.

NATURE REVIEWS MICROBIOLOGY (2020)

Review Biochemistry & Molecular Biology

Structural studies on bacterial system used in the recognition and uptake of the macromolecule alginate

Yukie Maruyama et al.

BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY (2019)

Article Multidisciplinary Sciences

Isothermal Analysis of ThermoFluor Data can readily provide Quantitative Binding Affinities

Nan Bai et al.

SCIENTIFIC REPORTS (2019)

Article Biochemistry & Molecular Biology

Interactive Tree Of Life (iTOL) v4: recent updates and new developments

Ivica Letunic et al.

NUCLEIC ACIDS RESEARCH (2019)

Article Biochemical Research Methods

Macromolecular structure determination using X-rays, neutrons and electrons: recent developments in Phenix

Dorothee Liebschner et al.

ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY (2019)

Article Biochemistry & Molecular Biology

MolProbity: More and better reference data for improved all-atom structure validation

Christopher J. Williams et al.

PROTEIN SCIENCE (2018)

Article Biochemistry & Molecular Biology

Structure and function of a novel periplasmic chitooligosaccharide-binding protein from marine Vibrio bacteria

Wipa Suginta et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2018)

Article Biochemistry & Molecular Biology

Structural and thermodynamic insights into β-1,2-glucooligosaccharide capture by a solute-binding protein in Listeria innocua

Koichi Abe et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2018)

Article Biochemistry & Molecular Biology

The Ocean Gene Atlas: exploring the biogeography of plankton genes online

Emilie Villar et al.

NUCLEIC ACIDS RESEARCH (2018)

Article Biochemical Research Methods

DIALS: implementation and evaluation of a new integration package

Graeme Winter et al.

ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY (2018)

Article Biochemistry & Molecular Biology

Differential Substrate Recognition by Maltose Binding Proteins Influenced by Structure and Dynamics

Shantanu Shukla et al.

BIOCHEMISTRY (2018)

Article Chemistry, Multidisciplinary

Reverse engineering: transaminase biocatalyst development using ancestral sequence reconstruction

Matthew Wilding et al.

GREEN CHEMISTRY (2017)

Article Biochemistry & Molecular Biology

Functional clues from the crystal structure of an orphan periplasmic ligand-binding protein from Treponema pallidum

Chad. A. Brautigam et al.

PROTEIN SCIENCE (2017)

Article Microbiology

Glucose Uptake in Prochlorococcus: Diversity of Kinetics and Effects on the Metabolism

Maria del Carmen Munoz-Marin et al.

FRONTIERS IN MICROBIOLOGY (2017)

Article Ecology

Cyanobacterial reuse of extracellular organic carbon in microbial mats

Rhona K. Stuart et al.

ISME JOURNAL (2016)

Article Biochemistry & Molecular Biology

An updated structural classification of substrate-binding proteins

Giel H. Scheepers et al.

FEBS LETTERS (2016)

Article Ecology

Global genetic capacity for mixotrophy in marine picocyanobacteria

Alexis P. Yelton et al.

ISME JOURNAL (2016)

Article Biochemistry & Molecular Biology

The substrate-binding protein in bacterial ABC transporters: dissecting roles in the evolution of substrate specificity

Abbas Maqbool et al.

BIOCHEMICAL SOCIETY TRANSACTIONS (2015)

Article Biochemistry & Molecular Biology

IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies

Lam-Tung Nguyen et al.

MOLECULAR BIOLOGY AND EVOLUTION (2015)

Article Biochemistry & Molecular Biology

Deciphering key features in protein structures with the new ENDscript server

Xavier Robert et al.

NUCLEIC ACIDS RESEARCH (2014)

Article Biochemistry & Molecular Biology

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

Kazutaka Katoh et al.

MOLECULAR BIOLOGY AND EVOLUTION (2013)

Article Biochemistry & Molecular Biology

Functional diversification of ROK-family transcriptional regulators of sugar catabolism in the Thermotogae phylum

Marat D. Kazanov et al.

NUCLEIC ACIDS RESEARCH (2013)

Editorial Material Multidisciplinary Sciences

More mixotrophy in the marine microbial mix

Lisa R. Moore

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2013)

Article Multidisciplinary Sciences

Structural basis for substrate specificity in the Escherichia coli maltose transport system

Michael L. Oldham et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2013)

Article Microbiology

Transcriptional regulation of the carbohydrate utilization network in Thermotoga maritima

Dmitry A. Rodionov et al.

FRONTIERS IN MICROBIOLOGY (2013)

Article Biochemistry & Molecular Biology

An ABC Transporter with Two Periplasmic Binding Proteins Involved in Iron Acquisition in Pseudomonas aeruginosa

Karl Brillet et al.

ACS CHEMICAL BIOLOGY (2012)

Letter Biochemical Research Methods

SignalP 4.0: discriminating signal peptides from transmembrane regions

Thomas Nordahl Petersen et al.

NATURE METHODS (2011)

Article Biochemical Research Methods

Recent developments in classical density modification

Kevin Cowtan

ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY (2010)

Article Biochemical Research Methods

Integration, scaling, space-group assignment and post-refinement

Wolfgang Kabsch

ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY (2010)

Article Biochemical Research Methods

Features and development of Coot

P. Emsley et al.

ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY (2010)

Article Biochemical Research Methods

Apo and ligand-bound structures of ModA from the archaeon Methanosarcina acetivorans

Sum Chan et al.

ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS (2010)

Review Biochemistry & Molecular Biology

A structural classification of substrate-binding proteins

Ronnie P. -A. Berntsson et al.

FEBS LETTERS (2010)

Editorial Material Biochemistry & Molecular Biology

Homes for the orphans: utilization of multiple substrate-binding proteins by ABC transporters

Gavin H. Thomas

MOLECULAR MICROBIOLOGY (2010)

Article Microbiology

Structure of Compositionally Simple Lipopolysaccharide from Marine Synechococcus

D. Scott Snyder et al.

JOURNAL OF BACTERIOLOGY (2009)

Review Microbiology

Ecological Genomics of Marine Picocyanobacteria

D. J. Scanlan et al.

MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS (2009)

Article Multidisciplinary Sciences

Glucose Uptake and Its Effect on Gene Expression in Prochlorococcus

Guadalupe Gomez-Baena et al.

PLOS ONE (2008)

Article Biotechnology & Applied Microbiology

Unraveling the genomic mosaic of a ubiquitous genus of marine cyanobacteria

Alexis Dufresne et al.

GENOME BIOLOGY (2008)

Article Biochemistry & Molecular Biology

The structure of a cyanobacterial bicarbonate transport protein, CmpA

Nicole M. Koropatkin et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2007)

Article Biochemical Research Methods

The use of differential scanning fluorimetry to detect ligand interactions that promote protein stability

Frank H. Niesen et al.

NATURE PROTOCOLS (2007)

Article Multidisciplinary Sciences

Genome sequence of Synechococcus CC9311:: Insights into adaptation to a coastal environment

Brian Palenik et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)

Article Biochemical Research Methods

Protein production by auto-induction in high-density shaking cultures

FW Studier

PROTEIN EXPRESSION AND PURIFICATION (2005)

Article Multidisciplinary Sciences

The genome of a motile marine Synechococcus

B Palenik et al.

NATURE (2003)

Article Multidisciplinary Sciences

Genome sequence of the cyanobacterium Prochlorococcus marinus SS120, a nearly minimal oxyphototrophic genome

A Dufresne et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2003)

Article Multidisciplinary Sciences

Electrostatics of nanosystems: Application to microtubules and the ribosome

NA Baker et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2001)