相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。Cyanorak v2.1: a scalable information system dedicated to the visualization and expert curation of marine and brackish picocyanobacteria genomes
Laurence Garczarek et al.
NUCLEIC ACIDS RESEARCH (2021)
PubChem in 2021: new data content and improved web interfaces
Sunghwan Kim et al.
NUCLEIC ACIDS RESEARCH (2021)
DALI and the persistence of protein shape
Liisa Holm
PROTEIN SCIENCE (2020)
Mixotrophy in marine picocyanobacteria: use of organic compounds by Prochlorococcus and Synechococcus
M. C. Munoz-Marin et al.
ISME JOURNAL (2020)
Tara Oceans: towards global ocean ecosystems biology
Shinichi Sunagawa et al.
NATURE REVIEWS MICROBIOLOGY (2020)
Evolutionary Mechanisms of Long-Term Genome Diversification Associated With Niche Partitioning in Marine Picocyanobacteria
Hugo Dore et al.
FRONTIERS IN MICROBIOLOGY (2020)
Structural studies on bacterial system used in the recognition and uptake of the macromolecule alginate
Yukie Maruyama et al.
BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY (2019)
Isothermal Analysis of ThermoFluor Data can readily provide Quantitative Binding Affinities
Nan Bai et al.
SCIENTIFIC REPORTS (2019)
Interactive Tree Of Life (iTOL) v4: recent updates and new developments
Ivica Letunic et al.
NUCLEIC ACIDS RESEARCH (2019)
Macromolecular structure determination using X-rays, neutrons and electrons: recent developments in Phenix
Dorothee Liebschner et al.
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY (2019)
MolProbity: More and better reference data for improved all-atom structure validation
Christopher J. Williams et al.
PROTEIN SCIENCE (2018)
Structure and function of a novel periplasmic chitooligosaccharide-binding protein from marine Vibrio bacteria
Wipa Suginta et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2018)
Structural and thermodynamic insights into β-1,2-glucooligosaccharide capture by a solute-binding protein in Listeria innocua
Koichi Abe et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2018)
The Ocean Gene Atlas: exploring the biogeography of plankton genes online
Emilie Villar et al.
NUCLEIC ACIDS RESEARCH (2018)
DIALS: implementation and evaluation of a new integration package
Graeme Winter et al.
ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY (2018)
Differential Substrate Recognition by Maltose Binding Proteins Influenced by Structure and Dynamics
Shantanu Shukla et al.
BIOCHEMISTRY (2018)
Reverse engineering: transaminase biocatalyst development using ancestral sequence reconstruction
Matthew Wilding et al.
GREEN CHEMISTRY (2017)
Functional clues from the crystal structure of an orphan periplasmic ligand-binding protein from Treponema pallidum
Chad. A. Brautigam et al.
PROTEIN SCIENCE (2017)
Structural Basis for Regulation and Specificity of Fructooligosaccharide Import in Streptococcus pneumoniae
Simone Culurgioni et al.
STRUCTURE (2017)
OneDep: Unified wwPDB System for Deposition, Biocuration, and Validation of Macromolecular Structures in the PDB Archive
Jasmine Y. Young et al.
STRUCTURE (2017)
Glucose Uptake in Prochlorococcus: Diversity of Kinetics and Effects on the Metabolism
Maria del Carmen Munoz-Marin et al.
FRONTIERS IN MICROBIOLOGY (2017)
Cyanobacterial reuse of extracellular organic carbon in microbial mats
Rhona K. Stuart et al.
ISME JOURNAL (2016)
An updated structural classification of substrate-binding proteins
Giel H. Scheepers et al.
FEBS LETTERS (2016)
Global genetic capacity for mixotrophy in marine picocyanobacteria
Alexis P. Yelton et al.
ISME JOURNAL (2016)
The substrate-binding protein in bacterial ABC transporters: dissecting roles in the evolution of substrate specificity
Abbas Maqbool et al.
BIOCHEMICAL SOCIETY TRANSACTIONS (2015)
Experimental Strategies for Functional Annotation and Metabolism Discovery: Targeted Screening of Solute Binding Proteins and Unbiased Panning of Metabolomes
Matthew W. Vetting et al.
BIOCHEMISTRY (2015)
A General Strategy for the Discovery of Metabolic Pathways: D-Threitol, L-Threitol, and Erythritol Utilization in Mycobacterium smegmatis
Hua Huang et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2015)
IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies
Lam-Tung Nguyen et al.
MOLECULAR BIOLOGY AND EVOLUTION (2015)
Uptake of L-cystine via an ABC transporter contributes defense of oxidative stress in the L-cystine export-dependent manner in Escherichia coli
Iwao Ohtsu et al.
PLOS ONE (2015)
Deciphering key features in protein structures with the new ENDscript server
Xavier Robert et al.
NUCLEIC ACIDS RESEARCH (2014)
MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
Kazutaka Katoh et al.
MOLECULAR BIOLOGY AND EVOLUTION (2013)
Functional diversification of ROK-family transcriptional regulators of sugar catabolism in the Thermotogae phylum
Marat D. Kazanov et al.
NUCLEIC ACIDS RESEARCH (2013)
More mixotrophy in the marine microbial mix
Lisa R. Moore
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2013)
Structural basis for substrate specificity in the Escherichia coli maltose transport system
Michael L. Oldham et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2013)
Transcriptional regulation of the carbohydrate utilization network in Thermotoga maritima
Dmitry A. Rodionov et al.
FRONTIERS IN MICROBIOLOGY (2013)
An ABC Transporter with Two Periplasmic Binding Proteins Involved in Iron Acquisition in Pseudomonas aeruginosa
Karl Brillet et al.
ACS CHEMICAL BIOLOGY (2012)
SignalP 4.0: discriminating signal peptides from transmembrane regions
Thomas Nordahl Petersen et al.
NATURE METHODS (2011)
Recent developments in classical density modification
Kevin Cowtan
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY (2010)
Integration, scaling, space-group assignment and post-refinement
Wolfgang Kabsch
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY (2010)
Features and development of Coot
P. Emsley et al.
ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY (2010)
Apo and ligand-bound structures of ModA from the archaeon Methanosarcina acetivorans
Sum Chan et al.
ACTA CRYSTALLOGRAPHICA SECTION F-STRUCTURAL BIOLOGY COMMUNICATIONS (2010)
A structural classification of substrate-binding proteins
Ronnie P. -A. Berntsson et al.
FEBS LETTERS (2010)
Significant CO2 fixation by small prymnesiophytes in the subtropical and tropical northeast Atlantic Ocean
Ludwig Jardillier et al.
ISME JOURNAL (2010)
Software News and Update AutoDock Vina: Improving the Speed and Accuracy of Docking with a New Scoring Function, Efficient Optimization, and Multithreading
Oleg Trott et al.
JOURNAL OF COMPUTATIONAL CHEMISTRY (2010)
Crystal Structures of the Solute Receptor GacH of Streptomyces glaucescens in Complex with Acarbose and an Acarbose Homolog: Comparison with the Acarbose-Loaded Maltose-Binding Protein of Salmonella typhimurium
Ardeschir Vahedi-Faridi et al.
JOURNAL OF MOLECULAR BIOLOGY (2010)
Homes for the orphans: utilization of multiple substrate-binding proteins by ABC transporters
Gavin H. Thomas
MOLECULAR MICROBIOLOGY (2010)
The ATP-binding cassette transporter Cbc (choline/betaine/carnitine) recruits multiple substrate-binding proteins with strong specificity for distinct quaternary ammonium compounds
Chiliang Chen et al.
MOLECULAR MICROBIOLOGY (2010)
Transport functions dominate the SAR11 metaproteome at low-nutrient extremes in the Sargasso Sea
Sarah M. Sowell et al.
ISME JOURNAL (2009)
Structure of Compositionally Simple Lipopolysaccharide from Marine Synechococcus
D. Scott Snyder et al.
JOURNAL OF BACTERIOLOGY (2009)
Structural Adaptations that Modulate Monosaccharide, Disaccharide, and Trisaccharide Specificities in Periplasmic Maltose-Binding Proteins
Matthew J. Cuneo et al.
JOURNAL OF MOLECULAR BIOLOGY (2009)
Ecological Genomics of Marine Picocyanobacteria
D. J. Scanlan et al.
MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS (2009)
Glucose Uptake and Its Effect on Gene Expression in Prochlorococcus
Guadalupe Gomez-Baena et al.
PLOS ONE (2008)
Unraveling the genomic mosaic of a ubiquitous genus of marine cyanobacteria
Alexis Dufresne et al.
GENOME BIOLOGY (2008)
The structure of a cyanobacterial bicarbonate transport protein, CmpA
Nicole M. Koropatkin et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2007)
The use of differential scanning fluorimetry to detect ligand interactions that promote protein stability
Frank H. Niesen et al.
NATURE PROTOCOLS (2007)
Genome sequence of Synechococcus CC9311:: Insights into adaptation to a coastal environment
Brian Palenik et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2006)
Protein production by auto-induction in high-density shaking cultures
FW Studier
PROTEIN EXPRESSION AND PURIFICATION (2005)
The genome of a motile marine Synechococcus
B Palenik et al.
NATURE (2003)
Genome sequence of the cyanobacterium Prochlorococcus marinus SS120, a nearly minimal oxyphototrophic genome
A Dufresne et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2003)
Blu-Ice and the Distributed Control System:: software for data acquisition and instrument control at macromolecular crystallography beamlines
TM McPhillips et al.
JOURNAL OF SYNCHROTRON RADIATION (2002)
Electrostatics of nanosystems: Application to microtubules and the ribosome
NA Baker et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2001)
Purification and characterization of glpX-encoded fructose 1,6-bisphosphatase, a new enzyme of the glycerol 3-phosphate regulon of Escherichia coli
JL Donahue et al.
JOURNAL OF BACTERIOLOGY (2000)