4.7 Article

Exploring japonica rice epigenetic diversity in the main production regions of Heilongjiang Province

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Plant Sciences

Genetic Structure and Geographical Differentiation of Traditional Rice (Oryza sativa L.) from Northern Vietnam

Ngoc Ha Luong et al.

Summary: The rice landraces in northern Vietnam exhibit rich genetic diversity, with distinct differentiation between japonica and indica types. Genetic differentiation is related to geographical regions, with the presence of subspecies-specific markers. The study suggests that these rice landraces have a dynamic genetic system, creating varying levels of genetic differentiation among regions while maintaining balanced genetic diversity.

PLANTS-BASEL (2021)

Article Agronomy

Genetic differentiation and restricted gene flow in rice landraces from Yunnan, China: effects of isolation-by-distance and isolation-by-environment

Di Cui et al.

Summary: Genetic differentiation of rice landraces in Yunnan, China shows a clear geographical decline from south to north, with distinct divisions into japonica and indica groups, further differentiated into subgroups based on geographic locations. Patterns of gene flow suggest isolation by distance and environment, with significant associations between loci and environmental factors indicating adaptation to local environments. Geographical isolation and environmental heterogeneity play dominant roles in driving adaptive divergence among rice landraces in Yunnan, China due to limited dispersal.
Article Agronomy

Resequencing of 672 Native Rice Accessions to Explore Genetic Diversity and Trait Associations in Vietnam

Janet Higgins et al.

Summary: The study analyzed 672 Vietnamese rice genomes, describing four Japonica and five Indica subpopulations within Vietnam. The Indica-5 (I5) subpopulation was expanded in Vietnam, showing unique genotype-phenotype associations. The study highlighted traits and genomic regions with potential for breeding climate resilient rice.
Article Plant Sciences

An epigenetic pathway in rice connects genetic variation to anaerobic germination and seedling establishment

Lina Castano-Duque et al.

Summary: This study investigated the genetic basis of anaerobic germination in rice, identifying it as a polygenic trait associated with transcription factors linked to ethylene responses and genes involved in metabolic processes. Further functional analysis focused on small RNA and methylation pathways, revealing the involvement of the RNA-directed DNA methylation (RdDm) pathway in rice responses to water status during germination and seedling establishment developmental stages.

PLANT PHYSIOLOGY (2021)

Article Zoology

Epigenetic Responses to Temperature and Climate

Beth A. McCaw et al.

INTEGRATIVE AND COMPARATIVE BIOLOGY (2020)

Article Biotechnology & Applied Microbiology

Epigenetic diversity of Saccharum spp. accessions assessed by methylation-sensitive amplification polymorphism (MSAP)

Alessandra Alves Martins et al.

3 BIOTECH (2020)

Article Biochemistry & Molecular Biology

The Quality of DNA Isolated from Processed Food and Feed via Different Extraction Procedures

Zora Piskata et al.

MOLECULES (2019)

Editorial Material Food Science & Technology

Editorial

Richard C. Cantrill

QUALITY ASSURANCE AND SAFETY OF CROPS & FOODS (2019)

Article Agronomy

Worldwide Genetic Diversity for Mineral Element Concentrations in Rice Grain

Shannon R. M. Pinson et al.

CROP SCIENCE (2015)

Article Engineering, Environmental

Arsenic Methylation in Soils and Its Relationship with Microbial arsM Abundance and Diversity, and As Speciation in Rice

Fang-Jie Zhao et al.

ENVIRONMENTAL SCIENCE & TECHNOLOGY (2013)

Article Biochemistry & Molecular Biology

Scoring and analysis of methylation-sensitive amplification polymorphisms for epigenetic population studies

Benjamin Schulz et al.

MOLECULAR ECOLOGY RESOURCES (2013)

Review Ecology

Epigenetic regulation of adaptive responses of forest tree species to the environment

Katharina Braeutigam et al.

ECOLOGY AND EVOLUTION (2013)

Article Plant Sciences

Epigenetic responses to drought stress in rice (Oryza sativa L.)

Gayacharan et al.

PHYSIOLOGY AND MOLECULAR BIOLOGY OF PLANTS (2013)

Article Biodiversity Conservation

STRUCTURE HARVESTER: a website and program for visualizing STRUCTURE output and implementing the Evanno method

Dent A. Earl et al.

CONSERVATION GENETICS RESOURCES (2012)

Article Biochemistry & Molecular Biology

DNA methylation changes detected by methylation-sensitive amplified polymorphism in two contrasting rice genotypes under salt stress

Wensheng Wang et al.

JOURNAL OF GENETICS AND GENOMICS (2011)

Review Plant Sciences

Genetic and Molecular Bases of Rice Yield

Yongzhong Xing et al.

ANNUAL REVIEW OF PLANT BIOLOGY, VOL 61 (2010)

Article Food Science & Technology

Comparative evaluation of DNA extraction methods for food crops

Nelly Datukishvili et al.

INTERNATIONAL JOURNAL OF FOOD SCIENCE AND TECHNOLOGY (2010)

Review Genetics & Heredity

Establishing, maintaining and modifying DNA methylation patterns in plants and animals

Julie A. Law et al.

NATURE REVIEWS GENETICS (2010)

Article Biochemistry & Molecular Biology

Detecting the number of clusters of individuals using the software STRUCTURE: a simulation study

G Evanno et al.

MOLECULAR ECOLOGY (2005)