相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。HLA-C*04:01 Affects HLA Class I Heterozygosity and Predicted Affinity to SARS-CoV-2 Peptides, and in Combination With Age and Sex of Armenian Patients Contributes to COVID-19 Severity
Anahit Hovhannisyan et al.
FRONTIERS IN IMMUNOLOGY (2022)
Comparative analysis of the risks of hospitalisation and death associated with SARS-CoV-2 omicron (B.1.1.529) and delta (B.1.617.2) variants in England: a cohort study
Tommy Nyberg et al.
LANCET (2022)
Antibody escape and global spread of SARS-CoV-2 lineage A.27
Tamara Kaleta et al.
NATURE COMMUNICATIONS (2022)
Host-pathogen dynamics in longitudinal clinical specimens from patients with COVID-19
Michelle J. Lin et al.
SCIENTIFIC REPORTS (2022)
COVID-19–Associated Hospitalizations Among Adults During SARS-CoV-2 Delta and Omicron Variant Predominance, by Race/Ethnicity and Vaccination Status — COVID-NET, 14 States, July 2021–January 2022
Christopher A. Taylor et al.
MMWR-MORBIDITY AND MORTALITY WEEKLY REPORT (2022)
HLA-A*03:01 is associated with increased risk of fever, chills, and stronger side effects from Pfizer-BioNTech COVID-19 vaccination
Alexandre Bolze et al.
HUMAN GENETICS AND GENOMICS ADVANCES (2022)
Sensitive Recovery of Complete SARS-CoV-2 Genomes from Clinical Samples by Use of Swift Biosciences' SARS-CoV-2 Multiplex Amplicon Sequencing Panel
Amin Addetia et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2021)
Establishment and lineage dynamics of the SARS-CoV-2 epidemic in the UK
Louis du Plessis et al.
SCIENCE (2021)
Investigating the first stage of the COVID-19 pandemic in Ukraine using epidemiological and genomic data
Yuriy Gankin et al.
INFECTION GENETICS AND EVOLUTION (2021)
Clinical and whole genome characterization of SARS-CoV-2 in India
Radhakrishna Muttineni et al.
PLOS ONE (2021)
Association of HLA Class I Genotypes With Severity of Coronavirus Disease-19
Maxim Shkurnikov et al.
FRONTIERS IN IMMUNOLOGY (2021)
Current HLA Investigations on SARS-CoV-2 and Perspectives
Venceslas Douillard et al.
FRONTIERS IN GENETICS (2021)
Genomic epidemiology of SARS-CoV-2 transmission lineages in Ecuador
Bernardo Gutierrez et al.
VIRUS EVOLUTION (2021)
Emerging SARS-CoV-2 Variants of Concern (VOCs): An Impending Global Crisis
Angel Yun-Kuan Thye et al.
BIOMEDICINES (2021)
SARS-CoV-2 transmission dynamics in Belarus in 2020 revealed by genomic and incidence data analysis
Alina Nemira et al.
COMMUNICATIONS MEDICINE (2021)
Association between HLA genotypes and COVID-19 susceptibility, severity and progression: a comprehensive review of the literature
Filippo Migliorini et al.
EUROPEAN JOURNAL OF MEDICAL RESEARCH (2021)
A novel coronavirus outbreak of global health concern
Chen Wang et al.
LANCET (2020)
A new coronavirus associated with human respiratory disease in China
Fan Wu et al.
NATURE (2020)
A pneumonia outbreak associated with a new coronavirus of probable bat origin
Peng Zhou et al.
NATURE (2020)
The species Severe acute respiratory syndrome-related coronavirus: classifying 2019-nCoV and naming it SARS-CoV-2
Alexander E. Gorbalenya et al.
NATURE MICROBIOLOGY (2020)
Bioinformatic prediction of potential T cell epitopes for SARS-Cov-2
Kazuma Kiyotani et al.
JOURNAL OF HUMAN GENETICS (2020)
Tracking Changes in SARS-CoV-2 Spike: Evidence that D614G Increases Infectivity of the COVID-19 Virus
Bette Korber et al.
CELL (2020)
A dynamic nomenclature proposal for SARS-CoV-2 lineages to assist genomic epidemiology
Andrew Rambaut et al.
NATURE MICROBIOLOGY (2020)
Comparison of seven commercial RT-PCR diagnostic kits for COVID-19
Puck B. van Kasteren et al.
JOURNAL OF CLINICAL VIROLOGY (2020)
Correlation of the two most frequent HLA haplotypes in the Italian population to the differential regional incidence of Covid-19
Simona Pisanti et al.
JOURNAL OF TRANSLATIONAL MEDICINE (2020)
Disentangling primer interactions improves SARS-CoV-2 genome sequencing by multiplex tiling PCR
Kentaro Itokawa et al.
PLOS ONE (2020)
Phylogenetic and phylodynamic analyses of SARS-CoV-2
Qing Nie et al.
VIRUS RESEARCH (2020)
Rapid genomic characterization of SARS-CoV-2 viruses from clinical specimens using nanopore sequencing
Jun Li et al.
SCIENTIFIC REPORTS (2020)
CorGAT: a tool for the functional annotation of SARS-CoV-2 genomes
Matteo Chiara et al.
BIOINFORMATICS (2020)
A rapid, cost-effective tailed amplicon method for sequencing SARS-CoV-2
Daryl M. Gohl et al.
BMC GENOMICS (2020)
Analytical validity of nanopore sequencing for rapid SARS-CoV-2 genome analysis
Rowena A. Bull et al.
NATURE COMMUNICATIONS (2020)
Minimap2: pairwise alignment for nucleotide sequences
Heng Li
BIOINFORMATICS (2018)
Nextstrain: real-time tracking of pathogen evolution
James Hadfield et al.
BIOINFORMATICS (2018)
Posterior Summarization in Bayesian Phylogenetics Using Tracer 1.7
Andrew Rambaut et al.
SYSTEMATIC BIOLOGY (2018)
TreeTime: Maximum-likelihood phylodynamic analysis
Pavel Sagulenko et al.
VIRUS EVOLUTION (2018)
GISAID: Global initiative on sharing all influenza data - from vision to reality
Yuelong Shu et al.
EUROSURVEILLANCE (2017)
Data, disease and diplomacy: GISAID's innovative contribution to global health
Stefan Elbe et al.
GLOBAL CHALLENGES (2017)
Exploring the temporal structure of heterochronous sequences using TempEst (formerly Path-O-Gen)
Andrew Rambaut et al.
VIRUS EVOLUTION (2016)
A complete bacterial genome assembled de novo using only nanopore sequencing data
Nicholas J. Loman et al.
NATURE METHODS (2015)
Virus evolution and transmission in an ever more connected world
Oliver G. Pybus et al.
PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2015)
IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies
Lam-Tung Nguyen et al.
MOLECULAR BIOLOGY AND EVOLUTION (2015)
Looking for trees in the forest: summary tree from posterior samples
Joseph Heled et al.
BMC EVOLUTIONARY BIOLOGY (2013)
MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
Kazutaka Katoh et al.
MOLECULAR BIOLOGY AND EVOLUTION (2013)
HLA-A, HLA-B, and HLA-DRB1 allele distribution in a large Armenian population sample
L. Matevosyan et al.
TISSUE ANTIGENS (2011)
MAFFT: a novel method for rapid multiple sequence alignment based on fast Fourier transform
K Katoh et al.
NUCLEIC ACIDS RESEARCH (2002)