相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。Analysis of COMPASS, a New Comprehensive Plasmid Database Revealed Prevalence of Multireplicon and Extensive Diversity of IncF Plasmids
Pierre-Emmanuel Douarre et al.
FRONTIERS IN MICROBIOLOGY (2020)
Whole Genome Sequencing Differentiates Presumptive Extended Spectrum Beta-Lactamase Producing Escherichia coli along Segments of the One Health Continuum
Emelia H. Adator et al.
MICROORGANISMS (2020)
Genetic capitalism and stabilizing selection of antimicrobial resistance genotypes in Escherichia coli
Colby T. Ford et al.
CLADISTICS (2020)
Dynamics of Resistance Plasmids in Extended-Spectrum-β-Lactamase-Producing Enterobacteriaceae during Postinfection Colonization
Alma Brolund et al.
ANTIMICROBIAL AGENTS AND CHEMOTHERAPY (2019)
Interactions between plasmids and other mobile genetic elements affect their transmission and persistence
Francisco Dionisio et al.
PLASMID (2019)
Emergence of plasmid stability under non-selective conditions maintains antibiotic resistance
Tanita Wein et al.
NATURE COMMUNICATIONS (2019)
Genome and plasmid diversity of Extended-Spectrum β-Lactamase-producing Escherichia coli ST131-tracking phylogenetic trajectories with Bayesian inference
Sofia Ny et al.
SCIENTIFIC REPORTS (2019)
Characterisation of chromosomally-located blaCTX-M and its surrounding sequence in CTX-M-type extended-spectrum β-lactamase-producing Escherichia coli isolates
Kouta Hamamoto et al.
JOURNAL OF GLOBAL ANTIMICROBIAL RESISTANCE (2019)
Diversity of P1 phage-like elements in multidrug resistant Escherichia coli
Carola Venturini et al.
SCIENTIFIC REPORTS (2019)
Plasmids carrying antimicrobial resistance genes in Enterobacteriaceae
M. Rozwandowicz et al.
JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY (2018)
Discovery, research, and development of new antibiotics: the WHO priority list of antibiotic-resistant bacteria and tuberculosis
Evelina Tacconelli et al.
LANCET INFECTIOUS DISEASES (2018)
Going around in circles: virulence plasmids in enteric pathogens
Giulia Pilla et al.
NATURE REVIEWS MICROBIOLOGY (2018)
Convergent Loss of ABC Transporter Genes From Clostridioides difficile Genomes Is Associated With Impaired Tyrosine Uptake and p-Cresol Production
Matthias Steglich et al.
FRONTIERS IN MICROBIOLOGY (2018)
Mobile Genetic Elements Associated with Antimicrobial Resistance
Sally R. Partridge et al.
CLINICAL MICROBIOLOGY REVIEWS (2018)
Global epidemiology of CTX-M β-lactamases: temporal and geographical shifts in genotype
Edward R. Bevan et al.
JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY (2017)
Rapid Nanopore Sequencing of Plasmids and Resistance Gene Detection in Clinical Isolates
Jamie K. Lemon et al.
JOURNAL OF CLINICAL MICROBIOLOGY (2017)
Detection of a Novel qnrB19-Carrying Plasmid Variant Mediating Decreased Fluoroquinolone Susceptibility in Salmonella enterica Serovar Hadar
Ulrike Fiegen et al.
MICROBIAL DRUG RESISTANCE (2017)
Molecular characterisation of extended-spectrum β-lactamase (ESBL)-producing Escherichia coli isolates from hospital and ambulatory patients in Germany
Michael Pietsch et al.
VETERINARY MICROBIOLOGY (2017)
Unicycler: Resolving bacterial genome assemblies from short and long sequencing reads
Ryan R. Wick et al.
PLOS COMPUTATIONAL BIOLOGY (2017)
The Role for the Small Cryptic Plasmids As Moldable Vectors for Genetic Innovation in Aeromonas salmonicida subsp salmonicida
Sabrina A. Attere et al.
FRONTIERS IN GENETICS (2017)
blaCTX-M-27-Encoding Escherichia coli Sequence Type 131 Lineage C1-M27 Clone in Clinical Isolates, Germany
Hiren Ghosh et al.
EMERGING INFECTIOUS DISEASES (2017)
A curated dataset of complete Enterobacteriaceae plasmids compiled from the NCBI nucleotide database
Alex Orlek et al.
DATA IN BRIEF (2017)
Complete Genome Sequences of Two Phage-Like Plasmids Carrying the CTX-M-15 Extended-Spectrum β-Lactamase Gene
Anna Colavecchio et al.
GENOME ANNOUNCEMENTS (2017)
Nested Russian Doll-Like Genetic Mobility Drives Rapid Dissemination of the Carbapenem Resistance Gene blaKPC
Anna E. Sheppard et al.
ANTIMICROBIAL AGENTS AND CHEMOTHERAPY (2016)
PHASTER: a better, faster version of the PHAST phage search tool
David Arndt et al.
NUCLEIC ACIDS RESEARCH (2016)
A Review of SHV Extended-Spectrum β-Lactamases: Neglected Yet Ubiquitous
Apostolos Liakopoulos et al.
FRONTIERS IN MICROBIOLOGY (2016)
Mash: fast genome and metagenome distance estimation using MinHash
Brian D. Ondov et al.
GENOME BIOLOGY (2016)
The Role of Epidemic Resistance Plasmids and International High-Risk Clones in the Spread of Multidrug-Resistant Enterobacteriaceae
Amy J. Mathers et al.
CLINICAL MICROBIOLOGY REVIEWS (2015)
Genetic characterization of three qnrS1-harbouring multidrug-resistance plasmids and qnrS1-containing transposons circulating in Ho Chi Minh City, Vietnam
Vien Le et al.
JOURNAL OF MEDICAL MICROBIOLOGY (2015)
Molecular mechanisms of antibiotic resistance
Jessica M. A. Blair et al.
NATURE REVIEWS MICROBIOLOGY (2015)
Rapid phylogenetic analysis of large samples of recombinant bacterial whole genome sequences using Gubbins
Nicholas J. Croucher et al.
NUCLEIC ACIDS RESEARCH (2015)
Inexpensive Multiplexed Library Preparation for Megabase-Sized Genomes
Michael Baym et al.
PLOS ONE (2015)
In Silico Detection and Typing of Plasmids using PlasmidFinder and Plasmid Multilocus Sequence Typing
Alessandra Carattoli et al.
ANTIMICROBIAL AGENTS AND CHEMOTHERAPY (2014)
Prokka: rapid prokaryotic genome annotation
Torsten Seemann
BIOINFORMATICS (2014)
Global dissemination of a multidrug resistant Escherichia coli clone
Nicola K. Petty et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)
Positive selection and compensatory adaptation interact to stabilize non-transmissible plasmids
A. San Millan et al.
NATURE COMMUNICATIONS (2014)
Plasmid Flux in Escherichia coli ST131 Sublineages, Analyzed by Plasmid Constellation Network (PLACNET), a New Method for Plasmid Reconstruction from Whole Genome Sequences
Val F. Lanza et al.
PLOS GENETICS (2014)
Plasmid Diversity and Adaptation Analyzed by Massive Sequencing of Escherichia coli Plasmids
Maria De Toro et al.
MICROBIOLOGY SPECTRUM (2014)
The Comprehensive Antibiotic Resistance Database
Andrew G. McArthur et al.
ANTIMICROBIAL AGENTS AND CHEMOTHERAPY (2013)
Plasmids and the spread of resistance
Alessandra Carattoli
INTERNATIONAL JOURNAL OF MEDICAL MICROBIOLOGY (2013)
Plasmidome-Analysis of ESBL-Producing Escherichia coli Using Conventional Typing and High-Throughput Sequencing
Alma Brolund et al.
PLOS ONE (2013)
The Epidemic of Extended-Spectrum-β-Lactamase-Producing Escherichia coli ST131 Is Driven by a Single Highly Pathogenic Subclone, H30-Rx
Lance B. Price et al.
MBIO (2013)
CTX-M enzymes: origin and diffusion
Rafael Canton et al.
FRONTIERS IN MICROBIOLOGY (2012)
Characterization of Small ColE-Like Plasmids Mediating Widespread Dissemination of the qnrB19 Gene in Commensal Enterobacteria
Lucia Pallecchi et al.
ANTIMICROBIAL AGENTS AND CHEMOTHERAPY (2010)
Ciprofloxacin-resistant, CTX-M-15-producing Escherichia coli ST131 clone in extraintestinal infections in Italy
M. Cerquetti et al.
CLINICAL MICROBIOLOGY AND INFECTION (2010)
Molecular epidemiology of Escherichia coli producing CTX-M β-lactamases: the worldwide emergence of clone ST131 O25:H4
Gisele Peirano et al.
INTERNATIONAL JOURNAL OF ANTIMICROBIAL AGENTS (2010)
Mobility of Plasmids
Chris Smillie et al.
MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS (2010)
progressiveMauve: Multiple Genome Alignment with Gene Gain, Loss and Rearrangement
Aaron E. Darling et al.
PLOS ONE (2010)
Resistance Plasmid Families in Enterobacteriaceae
Alessandra Carattoli
ANTIMICROBIAL AGENTS AND CHEMOTHERAPY (2009)
Dissemination of clonally related Escherichia coli strains expressing extended-spectrum β-lactamase CTX-M-15
Teresa M. Coque et al.
EMERGING INFECTIOUS DISEASES (2008)
ISfinder: the reference centre for bacterial insertion sequences
P. Siguier et al.
NUCLEIC ACIDS RESEARCH (2006)
Cytoscape: A software environment for integrated models of biomolecular interaction networks
P Shannon et al.
GENOME RESEARCH (2003)