4.6 Article

Use of 6 Nucleotide Length Words to Study the Complexity of Gene Sequences from Different Organisms

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Genetics & Heredity

Multiple Alignment of Promoter Sequences from the Arabidopsis thaliana L. Genome

Eugene V. Korotkov et al.

Summary: A new mathematical method for multiple alignment of highly divergent sequences (MAHDS) was developed, showing better performance than existing methods; conserved regions and important base pairs were identified by analyzing promoter sequences from the Arabidopsis thaliana genome.
Article Genetics & Heredity

Detection of Highly Divergent Tandem Repeats in the Rice Genome

Eugene Korotkov et al.

Summary: A new mathematical method called RPWM algorithm has been developed to identify highly divergent TRs in eukaryotic genomes, revealing the distribution and characteristics of TRs in the rice genome.
Review Genetics & Heredity

Next-Generation Sequencing in Newborn Screening: A Review of Current State

Ziga I. Remec et al.

Summary: Newborn screening was introduced in the 1960s, and has expanded over time with the advancement of technology, particularly high-throughput sequencing. Genomic sequencing is now widely used in clinical applications, including newborn screening, but has also raised various concerns and challenges.

FRONTIERS IN GENETICS (2021)

Article Microbiology

Genome Sequence of Candidatus Nitrosocosmicus franklandus C13, a Terrestrial Ammonia-Oxidizing Archaeon

Graeme W. Nicol et al.

MICROBIOLOGY RESOURCE ANNOUNCEMENTS (2019)

Article Multidisciplinary Sciences

The reconstruction of 2,631 draft metagenome-assembled genomes from the global oceans

Benjamin J. Tully et al.

SCIENTIFIC DATA (2018)

Article Microbiology

Alkaliphilus namsaraevii sp nov., an alkaliphilic iron- and sulfur-reducing bacterium isolated from a steppe soda lake

Anastasiya Zakharyuk et al.

INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2017)

Article Biotechnology & Applied Microbiology

Database of Periodic DNA Regions in Major Genomes

Felix E. Frenkel et al.

BIOMED RESEARCH INTERNATIONAL (2017)

Article Multidisciplinary Sciences

Evolutionary dynamics of selfish DNA explains the abundance distribution of genomic subsequences

Michael Sheinman et al.

SCIENTIFIC REPORTS (2016)

Article Multidisciplinary Sciences

Complex archaea that bridge the gap between prokaryotes and eukaryotes

Anja Spang et al.

NATURE (2015)

Article Biochemistry & Molecular Biology

Study of triplet periodicity differences inside and between genomes

Yulia M. Suvorova et al.

STATISTICAL APPLICATIONS IN GENETICS AND MOLECULAR BIOLOGY (2015)

Article Biochemistry & Molecular Biology

Study of triplet periodicity differences inside and between genomes

Yulia M. Suvorova et al.

STATISTICAL APPLICATIONS IN GENETICS AND MOLECULAR BIOLOGY (2015)

Article Biochemical Research Methods

Multicore and GPU algorithms for Nussinov RNA folding

Junjie Li et al.

BMC BIOINFORMATICS (2014)

Article Biology

Comparative analysis of periodicity search methods in DNA sequences

Yulia M. Suvorova et al.

COMPUTATIONAL BIOLOGY AND CHEMISTRY (2014)

Article Orthopedics

Kingella kingae septic arthritis in children: recognising an elusive pathogen

Nicole Williams et al.

JOURNAL OF CHILDRENS ORTHOPAEDICS (2014)

Review Psychology, Mathematical

Zipf's word frequency law in natural language: A critical review and future directions

Steven T. Piantadosi

PSYCHONOMIC BULLETIN & REVIEW (2014)

Review Biochemical Research Methods

Review of tandem repeat search tools: a systematic approach to evaluating algorithmic performance

Kian Guan Lim et al.

BRIEFINGS IN BIOINFORMATICS (2013)

Article Biotechnology & Applied Microbiology

Wavelet analysis of human DNA

J. A. Tenreiro Machado et al.

GENOMICS (2011)

Article Biochemical Research Methods

TRStalker: an efficient heuristic for finding fuzzy tandem repeats

Marco Pellegrini et al.

BIOINFORMATICS (2010)

Article Mathematical & Computational Biology

G-IMEx: A comprehensive software tool for detection of microsatellites from genome sequences

Suresh Babu Mudunuri et al.

BIOINFORMATION (2010)

Article Biochemical Research Methods

T-REKS: identification of Tandem REpeats in sequences with a K-meanS based algorithm

Julien Jorda et al.

BIOINFORMATICS (2009)

Article Multidisciplinary Sciences

Cell shape and cell-wall organization in Gram-negative bacteria

Kerwyn Casey Huang et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2008)

Article Microbiology

Acidaminococcus intestini sp nov., isolated from human clinical samples

Estelle Jumas-Bilak et al.

INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2007)

Review Genetics & Heredity

Intracellular pathogens go extreme: genome evolution in the Rickettsiales

Alistair C. Darby et al.

TRENDS IN GENETICS (2007)

Article Biochemistry & Molecular Biology

CRISPRFinder: a web tool to identify clustered regularly interspaced short palindromic repeats

Ibtissem Grissa et al.

NUCLEIC ACIDS RESEARCH (2007)

Article Biochemical Research Methods

Finding approximate tandem repeats in genomic sequences

Y Wexler et al.

JOURNAL OF COMPUTATIONAL BIOLOGY (2005)

Article Microbiology

Uruburuella suis gen. nov., sp nov., isolated from clinical specimens of pigs

AI Vela et al.

INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2005)

Article Biochemistry & Molecular Biology

mreps: efficient and flexible detection of tandem repeats in DNA

R Kolpakov et al.

NUCLEIC ACIDS RESEARCH (2003)

Article Physics, Multidisciplinary

Information decomposition method to analyze symbolical sequences

EV Korotkov et al.

PHYSICS LETTERS A (2003)

Article Biology

Zipf's law in importance of genes for cancer classification using microarray data

WT Li et al.

JOURNAL OF THEORETICAL BIOLOGY (2002)

Article Microbiology

Bacteremia due to Moraxella atlantae in a cancer patient

T De Baere et al.

JOURNAL OF CLINICAL MICROBIOLOGY (2002)

Review Multidisciplinary Sciences

Life in extreme environments

LJ Rothschild et al.

NATURE (2001)

Review Physics, Multidisciplinary

Order and correlations in genomic DNA sequences. The spectral approach

VV Lobzin et al.

USPEKHI FIZICHESKIKH NAUK (2000)