4.4 Article

Connecting Algal Polysaccharide Degradation to Formaldehyde Detoxification

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Review Ecology

The Biogeochemistry of Marine Polysaccharides: Sources, Inventories, and Bacterial Drivers of the Carbohydrate Cycle

C. Arnosti et al.

Summary: Polysaccharides are major components of marine biomass, with complex structures degraded by microbial communities. Recent advances in carbohydrate chemistry, bioinformatics, molecular ecology, and microbiology have provided new insights into polysaccharide structures and degradation mechanisms.

ANNUAL REVIEW OF MARINE SCIENCE, VOL 13, 2021 (2021)

Article Microbiology

Accumulation of detached kelp biomass in a subtidal temperate coastal ecosystem induces succession of epiphytic and sediment bacterial communities

Maeva Brunet et al.

Summary: Kelps play a significant role in temperate coastal ecosystems by creating new ecological niches for associated microbiota. This study revealed a biphasic succession in bacterial communities during the accumulation and degradation of kelp biomass, with early dominant genera being outcompeted by algal polysaccharide-degraders. Additionally, kelp accumulation altered bacterial communities in sediment, favoring anaerobic taxa involved in nutrient cycles.

ENVIRONMENTAL MICROBIOLOGY (2021)

Review Biochemistry & Molecular Biology

Marine Polysaccharides: Occurrence, Enzymatic Degradation and Utilization

Marcus Bauemgen et al.

Summary: Macroalgae species are fast growing and their polysaccharides are used as food ingredients due to their hydrocolloid properties or high bioactivity. The degradation of these valuable polysaccharides to access sugar components has been mostly unexplored, but recent discoveries of specific carbohydrate-active enzymes have opened up potential applications for marine polysaccharides.

CHEMBIOCHEM (2021)

Article Biochemistry & Molecular Biology

Structure-function analysis of a new PL17 oligoalginate lyase from the marine bacterium Zobellia galactanivorans DsijT

Diane Jouanneau et al.

Summary: Alginate is a major compound of brown macroalgae, serving as an important carbon and energy source for heterotrophic marine bacteria. These bacteria have complex alginolytic systems with multiple alginate lyases, belonging to different PL families. Biochemical and structural analyses help understand the catalytic mechanisms and evolution of functions among alginate lyases.

GLYCOBIOLOGY (2021)

Article Multidisciplinary Sciences

Laminarin is a major molecule in the marine carbon cycle

Stefan Becker et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2020)

Article Multidisciplinary Sciences

Mass spectrometry reveals the chemistry of formaldehyde cross-linking in structured proteins

Tamar Tayri-Wilk et al.

NATURE COMMUNICATIONS (2020)

Article Multidisciplinary Sciences

Bacteroidetes use thousands of enzyme combinations to break down glycans

Pascal Lapebie et al.

NATURE COMMUNICATIONS (2019)

Article Chemistry, Multidisciplinary

How formaldehyde reacts with amino acids

Jos J. A. G. Kamps et al.

COMMUNICATIONS CHEMISTRY (2019)

Article Biochemistry & Molecular Biology

Oxidative demethylation of algal carbohydrates by cytochrome P450 monooxygenases

Lukas Reisky et al.

NATURE CHEMICAL BIOLOGY (2018)

Article Biochemical Research Methods

Ribulose Monophosphate Shunt Provides Nearly All Biomass and Energy Required for Growth of E. coli

Hai He et al.

ACS SYNTHETIC BIOLOGY (2018)

Article Biochemistry & Molecular Biology

Specificity and mechanism of carbohydrate demethylation by cytochrome P450 monooxygenases

Craig S. Robb et al.

BIOCHEMICAL JOURNAL (2018)

Review Microbiology

Polysaccharide Utilization Loci: Fueling Microbial Communities

Julie M. Grondin et al.

JOURNAL OF BACTERIOLOGY (2017)

Article Multidisciplinary Sciences

Carrageenan catabolism is encoded by a complex regulon in marine heterotrophic bacteria

Elizabeth Ficko-Blean et al.

NATURE COMMUNICATIONS (2017)

Article Geosciences, Multidisciplinary

Substantial role of macroalgae in marine carbon sequestration

Dorte Krause-Jensen et al.

NATURE GEOSCIENCE (2016)

Article Biotechnology & Applied Microbiology

Revised phylogeny of Bacteroidetes and proposal of sixteen new taxa and two new combinations including Rhodothermaeota phyl. nov.

Raul Munoz et al.

SYSTEMATIC AND APPLIED MICROBIOLOGY (2016)

Review Biochemical Research Methods

Synthetic methylotrophy: engineering the production of biofuels and chemicals based on the biology of aerobic methanol utilization

William B. Whitaker et al.

CURRENT OPINION IN BIOTECHNOLOGY (2015)

Article Biotechnology & Applied Microbiology

Engineering Escherichia coli for methanol conversion

Jonas E. N. Mueller et al.

METABOLIC ENGINEERING (2015)

Article Biochemical Research Methods

Structural and biochemical characterization of the laminarinase ZgLamCGH16 from Zobellia galactanivorans suggests preferred recognition of branched laminarin

Aurore Labourel et al.

ACTA CRYSTALLOGRAPHICA SECTION D-STRUCTURAL BIOLOGY (2015)

Review Biotechnology & Applied Microbiology

Microorganisms living on macroalgae: diversity, interactions, and biotechnological applications

Marjolaine Martin et al.

APPLIED MICROBIOLOGY AND BIOTECHNOLOGY (2014)

Article Biochemistry & Molecular Biology

The β-Glucanase ZgLamA from Zobellia galactanivorans Evolved a Bent Active Site Adapted for Efficient Degradation of Algal Laminarin

Aurore Labourel et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2014)

Article Biotechnology & Applied Microbiology

The Genome of the Alga-Associated Marine Flavobacterium Formosa agariphila KMM 3901T Reveals a Broad Potential for Degradation of Algal Polysaccharides

Alexander J. Mann et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2013)

Article Chemistry, Multidisciplinary

Molecular level characterization of methyl sugars in marine high molecular weight dissolved organic matter

Christos Panagiotopoulos et al.

MARINE CHEMISTRY (2013)

Article Biochemistry & Molecular Biology

Biochemical and Structural Characterization of the Complex Agarolytic Enzyme System from the Marine Bacterium Zobellia galactanivorans

Jan-Hendrik Hehemann et al.

JOURNAL OF BIOLOGICAL CHEMISTRY (2012)

Review Microbiology

Microbial life in the phyllosphere

Julia A. Vorholt

NATURE REVIEWS MICROBIOLOGY (2012)

Article Microbiology

Discovery and structural characterization of a novel glycosidase family of marine origin

Etienne Rebuffet et al.

ENVIRONMENTAL MICROBIOLOGY (2011)

Review Microbiology

Environmental and gut Bacteroidetes: the food connection

Francois Thomas et al.

FRONTIERS IN MICROBIOLOGY (2011)

Article Chemistry, Multidisciplinary

Structural Characterization of Formaldehyde-Induced Cross-Links Between Amino Acids and Deoxynucleosides and Their Oligomers

Kun Lu et al.

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2010)

Review Biochemistry & Molecular Biology

The physiological role of the ribulose monophosphate pathway in bacteria and archaea

N Kato et al.

BIOSCIENCE BIOTECHNOLOGY AND BIOCHEMISTRY (2006)

Article Biotechnology & Applied Microbiology

Formaldehyde fixation contributes to detoxification for growth of a nonmethylotroph, Burkholderia cepacia TM1, on vanillic acid

R Mitsui et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2003)