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S. Mirarab et al.
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Philip Jones et al.
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Xiu-Jie Xi et al.
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Bruce J. Walker et al.
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Norman J. Wickett et al.
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STAR: ultrafast universal RNA-seq aligner
Alexander Dobin et al.
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GenomeTools: A Comprehensive Software Library for Efficient Processing of Structured Genome Annotations
Gordon Gremme et al.
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RC Edgar
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M Chau et al.
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L Li et al.
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K Katoh et al.
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Taxol biosynthesis:: Taxane 13α-hydroxylase is a cytochrome P450-dependent monooxygenase
S Jennewein et al.
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