4.6 Article

Multidrug Resistance Dynamics in Salmonella in Food Animals in the United States: An Analysis of Genomes from Public Databases

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Microbiology

Multidrug Resistance Dynamics in Salmonella in Food Animals in the United States: An Analysis of Genomes from Public Databases

Joao Pires et al.

Summary: The rapid growth of bacterial genomes in public databases presents opportunities to track antimicrobial resistance (AMR) trends. Using genomic data, it was found that resistance in nontyphoidal Salmonella varied among food animals in the United States, showing a decline in bovines and swine but an increase in poultry. Results from genomic surveillance were consistent with national surveillance data, indicating the potential for using genomes to monitor AMR trends in expanding sequencing capacities.

MICROBIOLOGY SPECTRUM (2021)

Review Public, Environmental & Occupational Health

Surveillance of antimicrobial resistance in low- and middle-income countries: a scattered picture

Katia Iskandar et al.

Summary: Comprehensive population-based surveillance data on antimicrobial resistance is lacking, especially in low- and middle-income countries facing challenges such as weak laboratory capacity and poor health information systems. Poor data quality hinders effective monitoring and tackling of antimicrobial resistance.

ANTIMICROBIAL RESISTANCE AND INFECTION CONTROL (2021)

Article Veterinary Sciences

Control of Salmonella Dublin in a bovine dairy herd

Emily Kent et al.

Summary: This study identifies the presence of S. Dublin in a dairy herd and the steps taken to control herd transmission after purchasing carrier cattle. The group of cows presumed to be the original carriers had the highest seroprevalence, which decreased with changes in testing and management throughout the study.

JOURNAL OF VETERINARY INTERNAL MEDICINE (2021)

Article Public, Environmental & Occupational Health

Preliminary Incidence and Trends of Infections with Pathogens Transmitted Commonly Through Food - Foodborne Diseases Active Surveillance Network, 10 US Sites, 2016-2019

Danielle M. Tack et al.

MMWR-MORBIDITY AND MORTALITY WEEKLY REPORT (2020)

Review Immunology

Modern Tools for Rapid Diagnostics of Antimicrobial Resistance

Antti Vasala et al.

FRONTIERS IN CELLULAR AND INFECTION MICROBIOLOGY (2020)

Article Biochemistry & Molecular Biology

Ten recommendations for supporting open pathogen genomic analysis in public health

Allison Black et al.

NATURE MEDICINE (2020)

Article Public, Environmental & Occupational Health

Whole-genome sequencing as part of national and international surveillance programmes for antimicrobial resistance: a roadmap

Carotin Vegyari et al.

BMJ GLOBAL HEALTH (2020)

Article Multidisciplinary Sciences

Global trends in antimicrobial resistance in animals in low- and middle-income countries

Thomas P. Van Boeckel et al.

SCIENCE (2019)

Review Public, Environmental & Occupational Health

Using Genomics to Track Global Antimicrobial Resistance

Rene S. Hendriksen et al.

FRONTIERS IN PUBLIC HEALTH (2019)

Review Genetics & Heredity

A genomic overview of the population structure of Salmonella

Nabil-Fareed Alikhan et al.

PLOS GENETICS (2018)

Article Biochemical Research Methods

Rapid and precise alignment of raw reads against redundant databases with KMA

Philip T. L. C. Clausen et al.

BMC BIOINFORMATICS (2018)

Article Biochemistry & Molecular Biology

Improvements to PATRIC, the all-bacterial Bioinformatics Database and Analysis Resource Center

Alice R. Wattam et al.

NUCLEIC ACIDS RESEARCH (2017)

Article Biotechnology & Applied Microbiology

Global Genomic Epidemiology of Salmonella enterica Serovar Typhimurium DT104

Pimlapas Leekitcharoenphon et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2016)

Review Infectious Diseases

Antimicrobial resistance in zoonotic nontyphoidal Salmonella: an alarming trend?

G. B. Michael et al.

CLINICAL MICROBIOLOGY AND INFECTION (2016)

Review Infectious Diseases

Salmonellosis: the role of poultry meat

P. Antunes et al.

CLINICAL MICROBIOLOGY AND INFECTION (2016)

Article Microbiology

Introduction to Preharvest Food Safety

Mary E. Torrence

MICROBIOLOGY SPECTRUM (2016)

Article Microbiology

Preharvest Food Safety in Broiler Chicken Production

Walid Q. Alali et al.

MICROBIOLOGY SPECTRUM (2016)

Article Biochemical Research Methods

Roary: rapid large-scale prokaryote pan genome analysis

Andrew J. Page et al.

BIOINFORMATICS (2015)

Article Biochemical Research Methods

RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies

Alexandros Stamatakis

BIOINFORMATICS (2014)

Article Biochemistry & Molecular Biology

RefSeq microbial genomes database: new representation and annotation strategy

Tatiana Tatusova et al.

NUCLEIC ACIDS RESEARCH (2014)

Article Infectious Diseases

Identification of acquired antimicrobial resistance genes

Ea Zankari et al.

JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY (2012)

Review Microbiology

Acquired antibiotic resistance genes: an overview

Angela H. A. M. van Hoek et al.

FRONTIERS IN MICROBIOLOGY (2011)