相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。A unified catalog of 204,938 reference genomes from the human gut microbiome
Alexandre Almeida et al.
NATURE BIOTECHNOLOGY (2021)
Clinical evidence of the role of Methanobrevibacter smithii in severe acute malnutrition
Aminata Camara et al.
SCIENTIFIC REPORTS (2021)
Taxonomic Description and Genome Sequence of Christensenella intestinihominis sp. nov., a Novel Cholesterol-Lowering Bacterium Isolated From Human Gut
Yuanqiang Zou et al.
FRONTIERS IN MICROBIOLOGY (2021)
Developmental trajectory of the healthy human gut microbiota during the first 5 years of life
Josefine Roswall et al.
CELL HOST & MICROBE (2021)
A New Strain of Christensenella minuta as a Potential Biotherapy for Obesity and Associated Metabolic Diseases
Wilfrid Mazier et al.
CELLS (2021)
GMrepo: a database of curated and consistently annotated human gut metagenomes
Sicheng Wu et al.
NUCLEIC ACIDS RESEARCH (2020)
Syntrophy via Interspecies H2 Transfer between Christensenella and Methanobrevibacter Underlies Their Global Cooccurrence in the Human Gut
Albane Ruaud et al.
MBIO (2020)
Assessment of Gram- and Viability-Staining Methods for Quantifying Bacterial Community Dynamics Using Flow Cytometry
Aurore Duquenoy et al.
FRONTIERS IN MICROBIOLOGY (2020)
Use of a Fluorescent Analog of Glucose (2-NBDG) To Identify Uncultured Rumen Bacteria That Take Up Glucose
Junyi Tao et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2019)
Evolutionary dynamics of bacteria in the gut microbiome within and across hosts
Nandita R. Garud et al.
PLOS BIOLOGY (2019)
Therapeutic Opportunities in Inflammatory Bowel Disease: Mechanistic Dissection of Host-Microbiome Relationships
Damian R. Plichta et al.
CELL (2019)
Targeted isolation and cultivation of uncultivated bacteria by reverse genomics
Karissa L. Cross et al.
NATURE BIOTECHNOLOGY (2019)
A library of human gut bacterial isolates paired with longitudinal multiomics data enables mechanistic microbiome research
M. Poyet et al.
NATURE MEDICINE (2019)
The human gut bacteria Christensenellaceae are widespread, heritable, and associated with health
Jillian L. Waters et al.
BMC BIOLOGY (2019)
The role of the microbiome in NAFLD and NASH
Aleksandra A. Kolodziejczyk et al.
EMBO MOLECULAR MEDICINE (2019)
Flow Virometry: a Powerful Tool To Functionally Characterize Viruses
Roger Lippe
JOURNAL OF VIROLOGY (2018)
Gut microbiome modulates response to anti-PD-1 immunotherapy in melanoma patients
V. Gopalakrishnan et al.
SCIENCE (2018)
Updating the 97% identity threshold for 16S ribosomal RNA OTUs
Robert C. Edgar
BIOINFORMATICS (2018)
The gut microbiota influences anticancer immunosurveillance and general health
Bertrand Routy et al.
NATURE REVIEWS CLINICAL ONCOLOGY (2018)
Metaproteomics reveals associations between microbiome and intestinal extracellular vesicle proteins in pediatric inflammatory bowel disease
Xu Zhang et al.
NATURE COMMUNICATIONS (2018)
Sorting cells alters their redox state and cellular metabolome
Elizabeth M. Llufrio et al.
REDOX BIOLOGY (2018)
Comparative analysis of Faecalibacterium prausnitzii genomes shows a high level of genome plasticity and warrants separation into new species-level taxa
Cormac Brian Fitzgerald et al.
BMC GENOMICS (2018)
Faecalibacterium prausnitzii: from microbiology to diagnostics and prognostics
Mireia Lopez-Siles et al.
ISME JOURNAL (2017)
Flow cytometric quantification, sorting and sequencing of methanogenic archaea based on F420 autofluorescence
Johannes Lambrecht et al.
MICROBIAL CELL FACTORIES (2017)
Quantitative microbiome profiling links gut community variation to microbial load
Doris Vandeputte et al.
NATURE (2017)
New Insights into the Diversity of the Genus Faecalibacterium
Leandro Benevides et al.
FRONTIERS IN MICROBIOLOGY (2017)
Functional Characterization of Novel Faecalibacterium prausnitzii Strains Isolated from Healthy Volunteers: A Step Forward in the Use of F. prausnitzii as a Next-Generation Probiotic
Rebeca Martin et al.
FRONTIERS IN MICROBIOLOGY (2017)
Rhea: a transparent and modular R pipeline for microbial profiling based on 16S rRNA gene amplicons
Ilias Lagkouvardos et al.
PEERJ (2017)
Next-generation probiotics: the spectrum from probiotics to live biotherapeutics
Paul W. O'Toole et al.
NATURE MICROBIOLOGY (2017)
Baseline gut microbiota predicts clinical response and colitis in metastatic melanoma patients treated with ipilimumab
N. Chaput et al.
ANNALS OF ONCOLOGY (2017)
Anoxia and glucose supplementation preserve neutrophil viability and function
Valerie Monceaux et al.
BLOOD (2016)
High-resolution microbiota flow cytometry reveals dynamic colitis-associated changes in fecal bacterial composition
Jakob Zimmermann et al.
EUROPEAN JOURNAL OF IMMUNOLOGY (2016)
MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets
Sudhir Kumar et al.
MOLECULAR BIOLOGY AND EVOLUTION (2016)
Culturing of 'unculturable' human microbiota reveals novel taxa and extensive sporulation
Hilary P. Browne et al.
NATURE (2016)
Metagenome-wide association studies: fine-mining the microbiome
Jun Wang et al.
NATURE REVIEWS MICROBIOLOGY (2016)
IMNGS: A comprehensive open resource of processed 16S rRNA microbial profiles for ecology and diversity studies
Ilias Lagkouvardos et al.
SCIENTIFIC REPORTS (2016)
Mucosa-Associated Faecalibacterium prausnitzii Phylotype Richness Is Reduced in Patients with Inflammatory Bowel Disease
Mireia Lopez-Siles et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2015)
A method to analyze, sort, and retain viability of obligate anaerobic microorganisms from complex microbial communities
Anne W. Thompson et al.
JOURNAL OF MICROBIOLOGICAL METHODS (2015)
Gut metabolites and bacterial community networks during a pilot intervention study with flaxseeds in healthy adult men
Ilias Lagkouvardos et al.
MOLECULAR NUTRITION & FOOD RESEARCH (2015)
Faecalibacterium prausnitzii Strain HTF-F and Its Extracellular Polymeric Matrix Attenuate Clinical Parameters in DSS-Induced Colitis
Oriana Rossi et al.
PLOS ONE (2015)
Human Genetics Shape the Gut Microbiome
Julia K. Goodrich et al.
CELL (2014)
Correlation between body mass index and gut concentrations of Lactobacillus reuteri, Bifidobacterium animalis, Methanobrevibacter smithii and Escherichia coli
M. Million et al.
INTERNATIONAL JOURNAL OF OBESITY (2013)
UPARSE: highly accurate OTU sequences from microbial amplicon reads
Robert C. Edgar
NATURE METHODS (2013)
Evaluation of general 16S ribosomal RNA gene PCR primers for classical and next-generation sequencing-based diversity studies
Anna Klindworth et al.
NUCLEIC ACIDS RESEARCH (2013)
SINA: Accurate high-throughput multiple sequence alignment of ribosomal RNA genes
Elmar Pruesse et al.
BIOINFORMATICS (2012)
Obesity-associated gut microbiota is enriched in Lactobacillus reuteri and depleted in Bifidobacterium animalis and Methanobrevibacter smithii
M. Million et al.
INTERNATIONAL JOURNAL OF OBESITY (2012)
Barcoded Primers Used in Multiplex Amplicon Pyrosequencing Bias Amplification
David Berry et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2011)
Search and clustering orders of magnitude faster than BLAST
Robert C. Edgar
BIOINFORMATICS (2010)
Functional single-cell analyses: flow cytometry and cell sorting of microbial populations and communities
Susann Mueller et al.
FEMS MICROBIOLOGY REVIEWS (2010)
Faecalibacterium prausnitzii is an anti-inflammatory commensal bacterium identified by gut microbiota analysis of Crohn disease patients
Harry Sokol et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2008)
Limits of propidium iodide as a cell viability indicator for environmental bacteria
Lei Shi et al.
CYTOMETRY PART A (2007)
MUSCLE: multiple sequence alignment with high accuracy and high throughput
RC Edgar
NUCLEIC ACIDS RESEARCH (2004)
分享论文
