相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。Metabolic profiles of multidrug resistant and extensively drug resistant Mycobacterium tuberculosis unveiled by metabolomics
Amanda Mendes Rego et al.
TUBERCULOSIS (2021)
Spatially Resolved Mass Spectrometry at the Single Cell: Recent Innovations in Proteomics and Metabolomics
Michael J. Taylor et al.
JOURNAL OF THE AMERICAN SOCIETY FOR MASS SPECTROMETRY (2021)
Transcriptional response to the host cell environment of a multidrug-resistant Mycobacterium tuberculosis clonal outbreak Beijing strain reveals its pathogenic features
Pakorn Aiewsakun et al.
SCIENTIFIC REPORTS (2021)
Metabolic bifunctionality of Rv0812 couples folate and peptidoglycan biosynthesis in Mycobacterium tuberculosis
Katherine A. Black et al.
JOURNAL OF EXPERIMENTAL MEDICINE (2021)
Metabolic fluxes for nutritional flexibility of Mycobacterium tuberculosis
Khushboo Borah et al.
MOLECULAR SYSTEMS BIOLOGY (2021)
Dissecting the RecA-(In)dependent Response to Mitomycin C in Mycobacterium tuberculosis Using Transcriptional Profiling and Proteomics Analyses
Anna Brzostek et al.
CELLS (2021)
Development of a fixed module repertoire for the analysis and interpretation of blood transcriptome data
Matthew C. Altman et al.
NATURE COMMUNICATIONS (2021)
Elucidating the Antimycobacterial Mechanism of Action of Decoquinate Derivative RMB041 Using Metabolomics
Kirsten E. Knoll et al.
ANTIBIOTICS-BASEL (2021)
Proteomic analysis of drug-susceptible and multidrug-resistant nonreplicating Beijing strains of Mycobacterium tuberculosis cultured in vitro
Bhanubong Saiboonjan et al.
BIOCHEMISTRY AND BIOPHYSICS REPORTS (2021)
Serum proteomics of active tuberculosis patients and contacts reveals unique processes activated during Mycobacterium tuberculosis infection
Jesus Mateos et al.
SCIENTIFIC REPORTS (2020)
Model-based integration of genomics and metabolomics reveals SNP functionality in Mycobacterium tuberculosis
Ove Oyas et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2020)
Aspartate aminotransferase Rv3722c governs aspartate-dependent nitrogen metabolism in Mycobacterium tuberculosis
Robert S. Jansen et al.
NATURE COMMUNICATIONS (2020)
Drug-Resistant Tuberculosis 2020: Where We Stand
Angelo Iacobino et al.
APPLIED SCIENCES-BASEL (2020)
The (in)significance of TB and COVID-19 co-infection
Alkesh Kumar Khurana et al.
EUROPEAN RESPIRATORY JOURNAL (2020)
Potential impact of the COVID-19 pandemic on HIV, tuberculosis, and malaria in low-income and middle-income countries: a modelling study
Alexandra B. Hogan et al.
LANCET GLOBAL HEALTH (2020)
Multi-Omics Technologies Applied to Tuberculosis Drug Discovery
Aaron Goff et al.
APPLIED SCIENCES-BASEL (2020)
Transcriptional portrait of M. bovis BCG during biofilm production shows genes differentially expressed during intercellular aggregation and substrate attachment
Mario Alberto Flores-Valdez et al.
SCIENTIFIC REPORTS (2020)
A systematic evaluation of Mycobacterium tuberculosis Genome-Scale Metabolic Networks
Victor A. Lopez-Agudelo et al.
PLOS COMPUTATIONAL BIOLOGY (2020)
GSMN-ML- a genome scale metabolic network reconstruction of the obligate human pathogenMycobacterium leprae
Khushboo Borah et al.
PLOS NEGLECTED TROPICAL DISEASES (2020)
A quantitative LC-MS/MS method for analysis of mitochondrial-specific oxysterol metabolism
Khushboo Borah et al.
REDOX BIOLOGY (2020)
Revisiting the Growth Modulon of Corynebacterium glutamicum Under Glucose Limited Chemostat Conditions
Michaela Graf et al.
FRONTIERS IN BIOENGINEERING AND BIOTECHNOLOGY (2020)
Lung gene expression signatures suggest pathogenic links and molecular markers for pulmonary tuberculosis, adenocarcinoma and sarcoidosis
Qiyao Chai et al.
COMMUNICATIONS BIOLOGY (2020)
Bedaquiline reprograms central metabolism to reveal glycolytic vulnerability in Mycobacterium tuberculosis
Jared S. Mackenzie et al.
NATURE COMMUNICATIONS (2020)
Integrative Metabolomics to Identify Molecular Signatures of Responses to Vaccines and Infections
Joann Diray-Arce et al.
METABOLITES (2020)
The global prevalence of latent tuberculosis: a systematic review and meta-analysis
Adam Cohen et al.
EUROPEAN RESPIRATORY JOURNAL (2019)
GWAS for quantitative resistance phenotypes in Mycobacterium tuberculosis reveals resistance genes and regulatory regions
Maha R. Farhat et al.
NATURE COMMUNICATIONS (2019)
Genome-wide mutational biases fuel transcriptional diversity in the Mycobacterium tuberculosis complex
Alvaro Chiner-Oms et al.
NATURE COMMUNICATIONS (2019)
Derailing the aspartate pathway of Mycobacterium tuberculosis to eradicate persistent infection
Erik J. Hasenoehrl et al.
NATURE COMMUNICATIONS (2019)
Intracellular Mycobacterium leprae Utilizes Host Glucose as a Carbon Source in Schwann Cells
Khushboo Borah et al.
MBIO (2019)
Intracellular Mycobacterium tuberculosis Exploits Multiple Host Nitrogen Sources during Growth in Human Macrophages
Khushboo Borah et al.
CELL REPORTS (2019)
Host Transcriptomics as a Tool to Identify Diagnostic and Mechanistic Immune Signatures of Tuberculosis
Julie G. Burel et al.
FRONTIERS IN IMMUNOLOGY (2019)
Flexible nitrogen utilisation by the metabolic generalist pathogen Mycobacterium tuberculosis
Aleksandra Agapova et al.
ELIFE (2019)
An integrated whole genome analysis of Mycobacterium tuberculosis reveals insights into relationship between its genome, transcriptome and methylome
Paula J. Gomez-Gonzalez et al.
SCIENTIFIC REPORTS (2019)
Updated and standardized genome-scale reconstruction of Mycobacterium tuberculosis H37Rv, iEK1011, simulates flux states indicative of physiological conditions
Erol S. Kavvas et al.
BMC SYSTEMS BIOLOGY (2018)
BCG Educates Hematopoietic Stem Cells to Generate Protective Innate Immunity against Tuberculosis
Eva Kaufmann et al.
CELL (2018)
The anaplerotic node is essential for the intracellular survival of Mycobacterium tuberculosis
Piyali Basu et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2018)
Genome-wide analysis of multi- and extensively drug-resistant Mycobacterium tuberculosis
Francesc Coll et al.
NATURE GENETICS (2018)
Label-Free Quantitative Proteomics Identifies Novel Plasma Biomarkers for Distinguishing Pulmonary Tuberculosis and Latent Infection
Huishan Sun et al.
FRONTIERS IN MICROBIOLOGY (2018)
Alveolar Macrophages Provide an Early Mycobacterium tuberculosis Niche and Initiate Dissemination
Sara B. Cohen et al.
CELL HOST & MICROBE (2018)
An Mtb-Human Protein-Protein Interaction Map Identifies a Switch between Host Antiviral and Antibacterial Responses
Bennett H. Penn et al.
MOLECULAR CELL (2018)
Modeling the Metabolic State of Mycobacterium tuberculosis Upon Infection
Rienk A. Rienksma et al.
FRONTIERS IN CELLULAR AND INFECTION MICROBIOLOGY (2018)
Machine learning and structural analysis of Mycobacterium tuberculosis pan-genome identifies genetic signatures of antibiotic resistance
Erol S. Kavvas et al.
NATURE COMMUNICATIONS (2018)
A guide to C-13 metabolic flux analysis for the cancer biologist
Maciek R. Antoniewicz
EXPERIMENTAL AND MOLECULAR MEDICINE (2018)
Quantitative Proteomic and Phosphoproteomic Analysis of H37Ra and H37Rv Strains of Mycobacterium tuberculosis
Renu Verma et al.
JOURNAL OF PROTEOME RESEARCH (2017)
The Cell Wall Lipid PDIM Contributes to Phagosomal Escape and Host Cell Exit of Mycobacterium tuberculosis
Jeff Quigley et al.
MBIO (2017)
Rab GTPases in Immunity and Inflammation
Akriti Prashar et al.
FRONTIERS IN CELLULAR AND INFECTION MICROBIOLOGY (2017)
The Macrophage: A Disputed Fortress in the Battle against Mycobacterium tuberculosis
Christophe J. Queval et al.
FRONTIERS IN MICROBIOLOGY (2017)
Systems proteomics approaches to study bacterial pathogens: application to Mycobacterium tuberculosis
Amir Banaei-Esfahani et al.
CURRENT OPINION IN MICROBIOLOGY (2017)
Quantitative proteomic analysis of host responses triggered by Mycobacterium tuberculosis infection in human macrophage cells
Hua Li et al.
ACTA BIOCHIMICA ET BIOPHYSICA SINICA (2017)
WUFlux: an open-source platform for 13C metabolic flux analysis of bacterial metabolism
Lian He et al.
BMC BIOINFORMATICS (2016)
Comparative Proteomic Analyses of Avirulent, Virulent, and Clinical Strains of Mycobacterium tuberculosis Identify Strain-specific Patterns
Gagan Deep Jhingan et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2016)
Pathway analysis using 13C-glycerol and other carbon tracers reveals a bipartite metabolism of Legionella pneumophila
Ina Haeuslein et al.
MOLECULAR MICROBIOLOGY (2016)
Metabolomics: beyond biomarkers and towards mechanisms
Caroline H. Johnson et al.
NATURE REVIEWS MOLECULAR CELL BIOLOGY (2016)
Hypoxia and classical activation limits Mycobacterium tuberculosis survival by Akt-dependent glycolytic shift in macrophages
S. K. Matta et al.
CELL DEATH DISCOVERY (2016)
Epigenetics and Proteomics Join Transcriptomics in the Quest for Tuberculosis Biomarkers
Maria M. Esterhuyse et al.
MBIO (2015)
Probing the Metabolic Network in Bloodstream-Form Trypanosoma brucei Using Untargeted Metabolomics with Stable Isotope Labelled Glucose
Darren J. Creek et al.
PLOS PATHOGENS (2015)
Metabolomics: Applications and Promise in Mycobacterial Disease
Mehdi Mirsaeidi et al.
ANNALS OF THE AMERICAN THORACIC SOCIETY (2015)
A metabolic biosignature of early response to anti-tuberculosis treatment
Sebabrata Mahapatra et al.
BMC INFECTIOUS DISEASES (2014)
Nitrogen metabolism in Mycobacterium tuberculosis physiology and virulence
Alexandre Gouzy et al.
NATURE REVIEWS MICROBIOLOGY (2014)
Systems-level modeling of mycobacterial metabolism for the identification of new (multi-)drug targets
Rienk A. Rienksma et al.
SEMINARS IN IMMUNOLOGY (2014)
Mycobacterium tuberculosis Exploits Asparagine to Assimilate Nitrogen and Resist Acid Stress during Infection
Alexandre Gouzy et al.
PLOS PATHOGENS (2014)
The Mtb Proteome Library: A Resource of Assays to Quantify the Complete Proteome of Mycobacterium tuberculosis
Olga T. Schubert et al.
CELL HOST & MICROBE (2013)
13C-Flux Spectral Analysis of Host-Pathogen Metabolism Reveals a Mixed Diet for Intracellular Mycobacterium tuberculosis
Dany J. V. Beste et al.
CHEMISTRY & BIOLOGY (2013)
Systems-Based Approaches to Probing Metabolic Variation within the Mycobacterium tuberculosis Complex
Emma K. Lofthouse et al.
PLOS ONE (2013)
Discovery of a glycerol 3-phosphate phosphatase reveals glycerophospholipid polar head recycling in Mycobacterium tuberculosis
Gerald Larrouy-Maumus et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2013)
Targeted Data Extraction of the MS/MS Spectra Generated by Data-independent Acquisition: A New Concept for Consistent and Accurate Proteome Analysis
Ludovic C. Gillet et al.
MOLECULAR & CELLULAR PROTEOMICS (2012)
Mycobacterium tuberculosis: success through dormancy
Martin Gengenbacher et al.
FEMS MICROBIOLOGY REVIEWS (2012)
Differential Producibility Analysis (DPA) of Transcriptomic Data with Metabolic Networks: Deconstructing the Metabolic Response of M. tuberculosis
Bhushan K. Bonde et al.
PLOS COMPUTATIONAL BIOLOGY (2011)
13C Metabolic Flux Analysis Identifies an Unusual Route for Pyruvate Dissimilation in Mycobacteria which Requires Isocitrate Lyase and Carbon Dioxide Fixation
Dany J. V. Beste et al.
PLOS PATHOGENS (2011)
Mycobacterium tuberculosis Wears What It Eats
David G. Russell et al.
CELL HOST & MICROBE (2010)
Activity-Based Metabolomic Profiling of Enzymatic Function: Identification of Rv1248c as a Mycobacterial 2-Hydroxy-3-oxoadipate Synthase
Luiz Pedro S. de Carvalho et al.
CHEMISTRY & BIOLOGY (2010)
Metabolomics of Mycobacterium tuberculosis Reveals Compartmentalized Co-Catabolism of Carbon Substrates
Luiz Pedro S. de Carvalho et al.
CHEMISTRY & BIOLOGY (2010)
Proteomic Definition of the Cell Wall of Mycobacterium tuberculosis
Lisa M. Wolfe et al.
JOURNAL OF PROTEOME RESEARCH (2010)
Portrait of a Pathogen: The Mycobacterium tuberculosis Proteome In Vivo
Nicole A. Kruh et al.
PLOS ONE (2010)
Gluconeogenic carbon flow of tricarboxylic acid cycle intermediates is critical for Mycobacterium tuberculosis to establish and maintain infection
Joeli Marrero et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2010)
Dynamic antibody responses to the Mycobacterium tuberculosis proteome
Shajo Kunnath-Velayudhan et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2010)
Insights into plant metabolic networks from steady-state metabolic flux analysis
Nicholas J. Kruger et al.
BIOCHIMIE (2009)
GSMN-TB:: a web-based genome scale network model of Mycobacterium tuberculosis metabolism
Dany J. V. Beste et al.
GENOME BIOLOGY (2007)
ICAT-based comparative proteomic analysis of nonreplicating persistent Mycobacterium tuberculosis
Sang Hyun Cho et al.
TUBERCULOSIS (2006)
Antigens secreted from Mycobacterium tuberculosis:: Identification by proteomics approach and test for diagnostic marker
YY Bahk et al.
PROTEOMICS (2004)
Proteomics reveals open reading frames in Mycobacterium tuberculosis H37Rv not predicted by genomics
PR Jungblut et al.
INFECTION AND IMMUNITY (2001)
A universal framework for 13C metabolic flux analysis
W Wiechert et al.
METABOLIC ENGINEERING (2001)
Comparison of the proteome of Mycobacterium tuberculosis strain H37Rv with clinical isolate CDC 1551
JC Betts et al.
MICROBIOLOGY-SGM (2000)