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Jeffery M. Saarela et al.
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Alexandros Stamatakis
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Li-Na Sha et al.
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David Roy Smith et al.
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Koichiro Tamura et al.
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Loss of the Acetyl-CoA Carboxylase (accD) Gene in Poales
Mark E. Harris et al.
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Matthew Parks et al.
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Linda A. Raubeson et al.
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Hea-Lim Lee et al.
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JA Finarelli et al.
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C Jaramillo et al.
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L Aagesen et al.
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Y Ogihara et al.
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