相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。Complete Genome Sequence of Ovine Mycobacterium avium subsp. paratuberculosis Strain JIII-386 (MAP-S/type III) and Its Comparison to MAP-S/type I, MAP-C, and M. avium Complex Genomes
Daniel Wibberg et al.
MICROORGANISMS (2021)
GTDB-Tk: a toolkit to classify genomes with the Genome Taxonomy Database
Pierre-Alain Chaumeil et al.
BIOINFORMATICS (2020)
Activity-based protein profiling in bacteria: Applications for identification of therapeutic targets and characterization of microbial communities
Laura J. Keller et al.
CURRENT OPINION IN CHEMICAL BIOLOGY (2020)
SignalP 5.0 improves signal peptide predictions using deep neural networks
Jose Juan Almagro Armenteros et al.
NATURE BIOTECHNOLOGY (2019)
Xylans of Red and Green Algae: What Is Known about Their Structures and How They Are Synthesised?
Yves S. Y. Hsieh et al.
POLYMERS (2019)
OrthoVenn2: a web server for whole-genome comparison and annotation of orthologous clusters across multiple species
Ling Xu et al.
NUCLEIC ACIDS RESEARCH (2019)
Thermoacidophilic Sulfolobus species as source for extremozymes and as novel archaeal platform organisms
Larissa Schocke et al.
CURRENT OPINION IN BIOTECHNOLOGY (2019)
An overview of activity-based probes for glycosidases
Liang Wu et al.
CURRENT OPINION IN CHEMICAL BIOLOGY (2019)
The SUPERFAMILY 2.0 database: a significant proteome update and a new webserver
Arun Prasad Pandurangan et al.
NUCLEIC ACIDS RESEARCH (2019)
Structural Insights into the Dual-Substrate Recognition and Catalytic Mechanisms of a Bifunctional Acetyl Ester-Xyloside Hydrolase from Caldicellulosiruptor lactoaceticus
Hao Cao et al.
ACS CATALYSIS (2019)
A flexible loop for mannan recognition and activity enhancement in a bifunctional glycoside hydrolase family 5
Po-Huang Liang et al.
BIOCHIMICA ET BIOPHYSICA ACTA-GENERAL SUBJECTS (2018)
Purification and characterization of novel bi-functional GH3 family β-xylosidase/β-glucosidase from Aspergillus niger ADH-11
Harshvadan Patel et al.
INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES (2018)
Screening of multimeric β-xylosidases from the gut microbiome of a higher termite, Globitermes brachycerastes
Chunyan Liu et al.
INTERNATIONAL JOURNAL OF BIOLOGICAL SCIENCES (2018)
A Completely Reimplemented MPI Bioinformatics Toolkit with a New HHpred Server at its Core
Lukas Zimmermann et al.
JOURNAL OF MOLECULAR BIOLOGY (2018)
dbCAN2: a meta server for automated carbohydrate-active enzyme annotation
Han Zhang et al.
NUCLEIC ACIDS RESEARCH (2018)
HMMER web server: 2018 update
Simon C. Potter et al.
NUCLEIC ACIDS RESEARCH (2018)
Multiplex Fluorescent, Activity-Based Protein Profiling Identifies Active α-Glycosidases and Other Hydrolases in Plants
Amjad M. Husaini et al.
PLANT PHYSIOLOGY (2018)
A standardized bacterial taxonomy based on genome phylogeny substantially revises the tree of life
Donovan H. Parks et al.
NATURE BIOTECHNOLOGY (2018)
Plant cell wall composition and enzymatic deconstruction
Thatiane Rodrigues Mota et al.
AIMS BIOENGINEERING (2018)
Activity-based protein profiling as a robust method for enzyme identification and screening in extremophilic Archaea
Susanne Zweerink et al.
NATURE COMMUNICATIONS (2017)
Microbial xylanases and their industrial application in pulp and paper biobleaching: a review
Abhishek Walia et al.
3 BIOTECH (2017)
Microbial xylanases and their industrial application in pulp and paper biobleaching: a review
Abhishek Walia et al.
3 BIOTECH (2017)
2016 update of the PRIDE database and its related tools
Juan Antonio Vizcaino et al.
NUCLEIC ACIDS RESEARCH (2016)
Estimating the success of enzyme bioprospecting through metagenomics: current status and future trends
Manuel Ferrer et al.
MICROBIAL BIOTECHNOLOGY (2016)
Genome analysis of the sugar beet pathogen Rhizoctonia solani AG2-2IIIB revealed high numbers in secreted proteins and cell wall degrading enzymes
Daniel Wibberg et al.
BMC GENOMICS (2016)
The MaxQuant computational platform for mass spectrometry-based shotgun proteomics
Stefka Tyanova et al.
NATURE PROTOCOLS (2016)
The Increasing Impact of Activity-Based Protein Profiling in Plant Science
Kyoko Morimoto et al.
PLANT AND CELL PHYSIOLOGY (2016)
Structural diversity of xylans in the cell walls of monocots
Maria J. Pena et al.
PLANTA (2016)
Isolation and Characterization of the First Xylanolytic Hyperthermophilic Euryarchaeon Thermococcus sp Strain 2319x1 and Its Unusual Multidomain Glycosidase
Sergey N. Gavrilov et al.
FRONTIERS IN MICROBIOLOGY (2016)
Detection of Active Mammalian GH31 α-Glucosidases in Health and Disease Using In-Class, Broad-Spectrum Activity-Based Probes
Jianbing Jiang et al.
ACS CENTRAL SCIENCE (2016)
Recombinant Cyclodextrinase from Thermococcus kodakarensis KOD1: Expression, Purification, and Enzymatic Characterization
Ying Sun et al.
ARCHAEA-AN INTERNATIONAL MICROBIOLOGICAL JOURNAL (2015)
Halo(natrono)archaea isolated from hypersaline lakes utilize cellulose and chitin as growth substrates
Dimitry Y. Sorokin et al.
FRONTIERS IN MICROBIOLOGY (2015)
Protein recovery from inclusion bodies of Escherichia coli using mild solubilization process
Anupam Singh et al.
MICROBIAL CELL FACTORIES (2015)
Enzyme Inhibitor Discovery by Activity-Based Protein Profiling
Micah J. Niphakis et al.
ANNUAL REVIEW OF BIOCHEMISTRY, VOL 83 (2014)
Novel Maltotriose-Hydrolyzing Thermoacidophilic Type III Pullulan Hydrolase from Thermococcus kodakarensis
Nasir Ahmad et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2014)
Maltose-forming α-amylase from the hyperthermophilic archaeon Pyrococcus sp ST04
Jong-Hyun Jung et al.
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY (2014)
Biochemical and kinetic characterization of the multifunctional β-glucosidase/β-xylosidase/α-arabinosidase, Bgxa1
R. J. Gruninger et al.
APPLIED MICROBIOLOGY AND BIOTECHNOLOGY (2014)
The identification and molecular characterization of the first archaeal bifunctional exo-beta-glucosidase/N-acetyl-beta-glucosaminidase demonstrate that family GH116 is made of three functionally distinct subfamilies
Maria Carmina Ferrara et al.
BIOCHIMICA ET BIOPHYSICA ACTA-GENERAL SUBJECTS (2014)
Current Developments in Activity-Based Protein Profiling
Lianne I. Willems et al.
BIOCONJUGATE CHEMISTRY (2014)
Prokka: rapid prokaryotic genome annotation
Torsten Seemann
BIOINFORMATICS (2014)
RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies
Alexandros Stamatakis
BIOINFORMATICS (2014)
Extremozymes - biocatalysts with unique properties from extremophilic microorganisms
Skander Elleuche et al.
CURRENT OPINION IN BIOTECHNOLOGY (2014)
Characterization of a phosphotriesterase-like lactonase from the hyperthermoacidophilic crenarchaeon Vulcanisaeta moutnovskia
Verena Kallnik et al.
JOURNAL OF BIOTECHNOLOGY (2014)
Broad-range Glycosidase Activity Profiling
Balakumaran Chandrasekar et al.
MOLECULAR & CELLULAR PROTEOMICS (2014)
Accurate Proteome-wide Label-free Quantification by Delayed Normalization and Maximal Peptide Ratio Extraction, Termed MaxLFQ
Juergen Cox et al.
MOLECULAR & CELLULAR PROTEOMICS (2014)
The carbohydrate-active enzymes database (CAZy) in 2013
Vincent Lombard et al.
NUCLEIC ACIDS RESEARCH (2014)
Biochemical characterization of a recombinant pullulanase from Thermococcus kodakarensis KOD1
T. Han et al.
LETTERS IN APPLIED MICROBIOLOGY (2013)
Novel Activity-Based Probes for Broad-Spectrum Profiling of Retaining beta-Exoglucosidases In Situ and In Vivo
Wouter W. Kallemeijn et al.
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION (2012)
Potential of Thermo and Alkali Stable Xylanases from Thielaviopsis basicola (MTCC-1467) in Biobleaching of Wood Kraft Pulp
Baby Rani Goluguri et al.
APPLIED BIOCHEMISTRY AND BIOTECHNOLOGY (2012)
Effect of Microwave Irradiation on Xylanase Production from Wheat Bran and Biobleaching of Eucalyptus Kraft Pulp
Fantahun Woldesenbet et al.
APPLIED BIOCHEMISTRY AND BIOTECHNOLOGY (2012)
Microbial xylanases: Engineering, production and industrial applications
Veeresh Juturu et al.
BIOTECHNOLOGY ADVANCES (2012)
Sequence fingerprints of enzyme specificities from the glycoside hydrolase family GH57
Karol Blesak et al.
EXTREMOPHILES (2012)
Beta-xylosidase activity of a GH3 glucosidase/xylosidase from yak rumen metagenome promotes the enzymatic degradation of hemicellulosic xylans
J. Zhou et al.
LETTERS IN APPLIED MICROBIOLOGY (2012)
Diversity and subcellular distribution of archaeal secreted proteins
Zalan Szabo et al.
FRONTIERS IN MICROBIOLOGY (2012)
Andromeda: A Peptide Search Engine Integrated into the MaxQuant Environment
Juergen Cox et al.
JOURNAL OF PROTEOME RESEARCH (2011)
Paenibacillus sp Strain E18 Bifunctional Xylanase-Glucanase with a Single Catalytic Domain
Pengjun Shi et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2010)
Influence of pH and temperature on soluble substrate generation with primary sludge fermentation
Emine Ubay Cokgor et al.
BIORESOURCE TECHNOLOGY (2009)
Isolation of the anaerobic thermoacidophilic crenarchaeote Acidilobus saccharovorans sp nov and proposal of Acidilobales ord. nov., including Acidilobaceae fam. nov and Caldisphaeraceae fam. nov.
M. I. Prokofeva et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2009)
Prediction of signal peptides in archaea
P. G. Bagos et al.
PROTEIN ENGINEERING DESIGN & SELECTION (2009)
Activity-based protein profiling: From enzyme chemistry
Benjamin F. Cravatt et al.
ANNUAL REVIEW OF BIOCHEMISTRY (2008)
Bifunctional xylanases and their potential use in biotechnology
Rakhee Khandeparker et al.
JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY (2008)
MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification
Juergen Cox et al.
NATURE BIOTECHNOLOGY (2008)
Production and partial characterization of cellulase free xylanase by Bacillus subtilis C 01 using agriresidues and its application in biobleaching of nonwoody plant pulps
M. Ayyachamy et al.
LETTERS IN APPLIED MICROBIOLOGY (2007)
Advantages of combined transmembrane topology and signal peptide prediction -: the Phobius web server
Lukas Kaell et al.
NUCLEIC ACIDS RESEARCH (2007)
Protocol for micro-purification, enrichment, pre-fractionation and storage of peptides for proteomics using StageTips
Juri Rappsilber et al.
NATURE PROTOCOLS (2007)
DNA-DNA hybridization values and their relationship to whole-genome sequence similarities
Johan Goris et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2007)
Parts per million mass accuracy on an orbitrap mass spectrometer via lock mass injection into a C-trap
JV Olsen et al.
MOLECULAR & CELLULAR PROTEOMICS (2005)
Industrial relevance of thermophilic Archaea
K Egorova et al.
CURRENT OPINION IN MICROBIOLOGY (2005)
Desulfurococcus fermentans sp nov., a novel hyperthermophilic archaeon from a Kamchatka hot spring, and emended description of the genus Desulfurococcus
AA Perevalova et al.
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2005)
Xylanases, xylanase families and extremophilic xylanases
T Collins et al.
FEMS MICROBIOLOGY REVIEWS (2005)
Profiling enzyme activities in vivo using click chemistry methods
AE Speers et al.
CHEMISTRY & BIOLOGY (2004)
A xylan-degrading strain of Sulfolobus solfataricus:: isolation and characterization of the xylanase activity
R Cannio et al.
EXTREMOPHILES (2004)
MUSCLE: multiple sequence alignment with high accuracy and high throughput
RC Edgar
NUCLEIC ACIDS RESEARCH (2004)
BLAST: at the core of a powerful and diverse set of sequence analysis tools
S McGinnis et al.
NUCLEIC ACIDS RESEARCH (2004)
X-ray structure of a membrane-bound β-glycosidase from the hyperthermophilic Archaeon Pyrococcus horikoshii
T Akiba et al.
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2004)
Prospecting for novel biocatalysts in a soil metagenome
S Voget et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2003)
GenDB -: an open source genome annotation system for prokaryote genomes
F Meyer et al.
NUCLEIC ACIDS RESEARCH (2003)
Comment on The first description of an archaeal hemicellulase:: the xylanase from Thermococcus zilligii strain AN1:: evidence that the unique N-terminal sequence proposed comes from a maltodextrin phosphorylase
JL Rolland et al.
EXTREMOPHILES (2002)
Predicting transmembrane protein topology with a hidden Markov model: Application to complete genomes
A Krogh et al.
JOURNAL OF MOLECULAR BIOLOGY (2001)
Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis
J Castresana
MOLECULAR BIOLOGY AND EVOLUTION (2000)
分享论文
