相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。Advances and opportunities in image analysis of bacterial cells and communities
Hannah Jeckel et al.
FEMS MICROBIOLOGY REVIEWS (2021)
Quantitative image analysis of microbial communities with BiofilmQ
Raimo Hartmann et al.
NATURE MICROBIOLOGY (2021)
Three-dimensional biofilm colony growth supports a mutualism involving matrix and nutrient sharing
Heidi A. Arjes et al.
ELIFE (2021)
Non-additive microbial community responses to environmental complexity
Alan R. Pacheco et al.
NATURE COMMUNICATIONS (2021)
Bacterial Multicellularity: The Biology of Escherichia coli Building Large-Scale Biofilm Communities
Diego O. Serra et al.
ANNUAL REVIEW OF MICROBIOLOGY, VOL 75, 2021 (2021)
Unravelling interspecies interactions across heterogeneities in complex biofilm communities
Henriette L. Roder et al.
ENVIRONMENTAL MICROBIOLOGY (2020)
Specific Eco-evolutionary Contexts in the Mouse Gut Reveal Escherichia coli Metabolic Versatility
Joao Barroso-Batista et al.
CURRENT BIOLOGY (2020)
Spatial mapping of polymicrobial communities reveals a precise biogeography associated with human dental caries
Dongyeop Kim et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2020)
Metabolic Heterogeneity and Cross-Feeding in Bacterial Multicellular Systems
Christopher R. Evans et al.
TRENDS IN MICROBIOLOGY (2020)
Micron Scale Spatial Measurement of the O2 Gradient Surrounding a Bacterial Biofilm in Real Time
Alexander D. Klementiev et al.
MBIO (2020)
Acetate and glycerol are not uniquely suited for the evolution of cross-feeding in E. coli
Magdalena San Roman et al.
PLOS COMPUTATIONAL BIOLOGY (2020)
Forfeiting the priority effect: turnover defines biofilm community succession
Colin J. Brislawn et al.
ISME JOURNAL (2019)
Bacteria and archaea on Earth and their abundance in biofilms
Hans-Curt Flemming et al.
NATURE REVIEWS MICROBIOLOGY (2019)
Spatiotemporal establishment of dense bacterial colonies growing on hard agar
Mya R. Warren et al.
ELIFE (2019)
Metabolic Modeling of Cystic Fibrosis Airway Communities Predicts Mechanisms of Pathogen Dominance
Michael A. Henson et al.
MSYSTEMS (2019)
The Classification and Evolution of Bacterial Cross-Feeding
Nick W. Smith et al.
FRONTIERS IN ECOLOGY AND EVOLUTION (2019)
L-Alanine Exporter, AlaE, of Escherichia coli Functions as a Safety Valve to Enhance Survival under Feast Conditions
Satoshi Katsube et al.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2019)
Emergent microscale gradients give rise to metabolic cross-feeding and antibiotic tolerance in clonal bacterial populations
Alma Dal Co et al.
PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2019)
Costless metabolic secretions as drivers of interspecies interactions in microbial ecosystems
Alan R. Pacheco et al.
NATURE COMMUNICATIONS (2019)
Dynamic biofilm architecture confers individual and collective mechanisms of viral protection
Lucia Vidakovic et al.
NATURE MICROBIOLOGY (2018)
Metabolism in dense microbial colonies: 13C metabolic flux analysis of E. coli grown on agar identifies two distinct cell populations with acetate crossfeeding
Eric Wolfsberg et al.
METABOLIC ENGINEERING (2018)
The Pseudomonas aeruginosa Complement of Lactate Dehydrogenases Enables Use of D- and L-Lactate and Metabolic Cross-Feeding
Yu-Cheng Lin et al.
MBIO (2018)
An enormous potential for niche construction through bacterial cross-feeding in a homogeneous environment
Magdalena San Roman et al.
PLOS COMPUTATIONAL BIOLOGY (2018)
Coupling between distant biofilms and emergence of nutrient time-sharing
Jintao Liu et al.
SCIENCE (2017)
An orphan cbb3-type cytochrome oxidase subunit supports Pseudomonas aeruginosa biofilm growth and virulence
Jeanyoung Jo et al.
ELIFE (2017)
Candida albicans stimulates Streptococcus mutans microcolony development via cross-kingdom biofilm-derived metabolites
Dongyeop Kim et al.
Scientific Reports (2017)
Time-Optimized Isotope Ratio LC-MS/MS for High-Throughput Quantification of Primary Metabolites
Jan Christopher Guder et al.
ANALYTICAL CHEMISTRY (2017)
Privatization of cooperative benefits stabilizes mutualistic cross-feeding interactions in spatially structured environments
Samay Pande et al.
ISME JOURNAL (2016)
Biofilms: an emergent form of bacterial life
Hans-Curt Flemming et al.
NATURE REVIEWS MICROBIOLOGY (2016)
Spatially-resolved metabolic cooperativity within dense bacterial colonies
John A. Cole et al.
BMC SYSTEMS BIOLOGY (2015)
Overflow metabolism in Escherichia coli results from efficient proteome allocation
Markus Basan et al.
NATURE (2015)
Metabolic co-dependence gives rise to collective oscillations within biofilms
Jintao Liu et al.
NATURE (2015)
Ion channels enable electrical communication in bacterial communities
Arthur Prindle et al.
NATURE (2015)
A functional perspective on phenotypic heterogeneity in microorganisms
Martin Ackermann
NATURE REVIEWS MICROBIOLOGY (2015)
Giving structure to the biofilm matrix: an overview of individual strategies and emerging common themes
Laura Hobley et al.
FEMS MICROBIOLOGY REVIEWS (2015)
Microanatomy at Cellular Resolution and Spatial Order of Physiological Differentiation in a Bacterial Biofilm
Diego O. Serra et al.
MBIO (2013)
Improving FRET dynamic range with bright green and red fluorescent proteins
Amy J. Lam et al.
NATURE METHODS (2012)
Interkingdom metabolic transformations captured by microbial imaging mass spectrometry
Wilna J. Moree et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)
Inducible L-Alanine Exporter Encoded by the Novel Gene ygaW (alaE) in Escherichia coli
Hatsuhiro Hori et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2011)
Identification of an L-alanine export system in Escherichia coli and isolation and characterization of export-deficient mutants
Hatsuhiro Hori et al.
FEMS MICROBIOLOGY LETTERS (2011)
Translating metabolic exchange with imaging mass spectrometry
Yu-Liang Yang et al.
NATURE CHEMICAL BIOLOGY (2009)
Evaluation of isolation methods and RNA integrity for bacterial RNA quantitation
Courtney E. Jahn et al.
JOURNAL OF MICROBIOLOGICAL METHODS (2008)
Physiological heterogeneity in biofilms
Philip S. Stewart et al.
NATURE REVIEWS MICROBIOLOGY (2008)
Spatial patterns of DNA replication, protein synthesis, and oxygen concentration within bacterial biofilms reveal diverse physiological states
Suriani Abdul Rani et al.
JOURNAL OF BACTERIOLOGY (2007)
Spatiometabolic stratification of Shewanella oneidensis biofilms
Tracy K. Teal et al.
APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2006)
Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110
Koji Hayashi et al.
MOLECULAR SYSTEMS BIOLOGY (2006)
A Tn7-based broad-range bacterial cloning and expression system
KH Choi et al.
NATURE METHODS (2005)
Genesis: cluster analysis of microarray data
A Sturn et al.
BIOINFORMATICS (2002)
One-step inactivation of chromosomal genes in Escherichia coli K-12 using PCR products
KA Datsenko et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2000)
分享论文
