4.7 Article

Engineering Transcription Factor XylS for Sensing Phthalic Acid and Terephthalic Acid: An Application for Enzyme Evolution

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Review Biochemistry & Molecular Biology

Novel Pet-Degrading Enzymes: Structure-Function from a Computational Perspective

Alessandro Berselli et al.

Summary: Efforts have been dedicated to elucidating the structure and features of PETase and MHETase enzymes, optimizing them for industrial applications. The versatility of enzymes secreted by I. sakaiensis suggests potential applications in PET debris disposal, making it a prolific research field to prioritize efforts in.

CHEMBIOCHEM (2021)

Review Biochemistry & Molecular Biology

IsPETase Is a Novel Biocatalyst for Poly(ethylene terephthalate) (PET) Hydrolysis

Yeyi Kan et al.

Summary: PET is widely used but also a major source of plastic pollution. Enzymatic processes have been explored for PET waste disposal, with IsPETase showing potential for industrial applications. Continuing research on cutinase-like enzymes could lead to suitable biocatalysts for industrial use.

CHEMBIOCHEM (2021)

Article Environmental Sciences

Spatial distribution, historical trend, and ecological risk assessment of phthalate esters in sediment from Taihu Lake, China

Wenping Zhang et al.

Summary: This study investigated the distribution and ecological risks of phthalate esters in sediment samples from Taihu Lake, China. It revealed that DBP and DIBP were the dominant PAEs, with the highest concentrations found in the northern lake, indicating varying pollution levels across different areas of the lake. The historical trend of PAEs in sediments showed an increase since the 1990s in the northern core sediments.

ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH (2021)

Article Chemistry, Physical

Computational Redesign of a PETase for Plastic Biodegradation under Ambient Condition by the GRAPE Strategy

Yinglu Cui et al.

Summary: This study successfully improved the robustness of PETase through a computational strategy, resulting in the redesign of a variant DuraPETase with significantly elevated melting temperature and enhanced degradation of PET films, as well as complete biodegradation of microplastics at mild temperatures. The design strategy presents opportunities for handling uncollectable PET waste and converting resulting monomers into high-value molecules.

ACS CATALYSIS (2021)

Article Biochemistry & Molecular Biology

Analytical methods for the investigation of enzyme-catalyzed degradation of polyethylene terephthalate

Valentina Pirillo et al.

Summary: The study focuses on the persistent pollution concerns of PET plastic in global ecosystems and the enzymatic degradation research, including kinetic analysis of enzymes and methods study, providing important information for biologically recycling PET waste products.

FEBS JOURNAL (2021)

Article Biochemistry & Molecular Biology

Protein engineering of stable IsPETase for PET plastic degradation by Premuse

Xiangxi Meng et al.

Summary: This study developed a mutation design tool, Premuse, to select two mutations (W159H and F229Y) with improved stability from 10 single point mutants, resulting in a double point mutant with enhanced enzymatic performance for degrading PET. The derived variant showed increased T-m and catalytic efficiency, and significantly improved degradation activity for amorphous PET.

INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES (2021)

Article Chemistry, Multidisciplinary

Reshaping the active pocket of promiscuous lactonases for degrading bulky organophosphate flame retardants

Yuanyuan Zhang et al.

Summary: Semi-rational evolution led to a 1007-fold improvement in catalytic activity of a promiscuous lactonase for degrading TPHP, a common OPFR. This is the first artificial enzyme capable of degrading OPFRs, marking a significant advancement in enzyme engineering.

CHEMICAL COMMUNICATIONS (2021)

Article Chemistry, Physical

General features to enhance enzymatic activity of poly(ethylene terephthalate) hydrolysis

Chun-Chi Chen et al.

Summary: The mutational strategy of replacing His/Phe residues with Ser/Ile has been found to enhance the PET-hydrolytic activity of enzymes, providing an important approach for improving the activity of potential PET-hydrolytic enzymes.

NATURE CATALYSIS (2021)

Article Infectious Diseases

Expression of AraC/XylS stress response regulators in two distinct carbapenem-resistant Enterobacter cloacae ST89 biotypes

Piotr Majewski et al.

JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY (2020)

Review Microbiology

Ecology of the plastisphere

Linda A. Amaral-Zettler et al.

NATURE REVIEWS MICROBIOLOGY (2020)

Review Biotechnology & Applied Microbiology

Transcription Factor Engineering for High-Throughput Strain Evolution and Organic Acid Bioproduction: A Review

Jia-Wei Li et al.

FRONTIERS IN BIOENGINEERING AND BIOTECHNOLOGY (2020)

Review Chemistry, Multidisciplinary

Beyond Mechanical Recycling: Giving New Life to Plastic Waste

Ina Vollmer et al.

ANGEWANDTE CHEMIE-INTERNATIONAL EDITION (2020)

Review Oceanography

A Global Perspective on Microplastics

Robert C. Hale et al.

JOURNAL OF GEOPHYSICAL RESEARCH-OCEANS (2020)

Article Multidisciplinary Sciences

An engineered PET depolymerase to break down and recycle plastic bottles

V. Tournier et al.

NATURE (2020)

Article Biotechnology & Applied Microbiology

Biodegradation of diethyl-phthalate (DEP) by halotolerant bacteria isolated from an estuarine environment

Elen Aquino Perpetuo et al.

BIODEGRADATION (2020)

Article Biochemistry & Molecular Biology

The sugarcane ShMYB78 transcription factor activates suberin biosynthesis inNicotiana benthamiana

Raquel Figueiredo et al.

PLANT MOLECULAR BIOLOGY (2020)

Article Multidisciplinary Sciences

Characterization and engineering of a two-enzyme system for plastics depolymerization

Brandon C. Knott et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2020)

Article Chemistry, Physical

Biodegradation of PET: Current Status and Application Aspects

Ikuo Taniguchi et al.

ACS CATALYSIS (2019)

Article Biotechnology & Applied Microbiology

Development and application of a transcriptional sensor for detection of heterologous acrylic acid production in E. coli

Sarada S. Raghavan et al.

MICROBIAL CELL FACTORIES (2019)

Article Biochemical Research Methods

Expanding the Dynamic Range of a Transcription Factor-Based Biosensor in Saccharomyces cerevisiae

Yasaman Dabirian et al.

ACS SYNTHETIC BIOLOGY (2019)

Article Biochemical Research Methods

Reverse Engineering of an Aspirin-Responsive Transcriptional Regulator in Escherichia coli

Lummy Maria Oliveira Monteiro et al.

ACS SYNTHETIC BIOLOGY (2019)

Article Biochemical Research Methods

Directed evolution of the PcaV allosteric transcription factor to generate a biosensor for aromatic aldehydes

Leopoldo F. M. Machado et al.

JOURNAL OF BIOLOGICAL ENGINEERING (2019)

Article Chemistry, Multidisciplinary

A Practical Fluorescence-Based Screening Protocol for Polyethylene Terephthalate Degrading Microorganisms

Michel R. B. Chaves et al.

JOURNAL OF THE BRAZILIAN CHEMICAL SOCIETY (2018)

Article Biochemical Research Methods

New Intracellular Shikimic Acid Biosensor for Monitoring Shikimate Synthesis in Corynebacterium glutamicum

Chang Liu et al.

ACS SYNTHETIC BIOLOGY (2018)

Article Multidisciplinary Sciences

Characterization and engineering of a plastic-degrading aromatic polyesterase

Harry P. Austin et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2018)

Review Biochemistry & Molecular Biology

Structural studies reveal the molecular mechanism of PETase

Chun-Chi Chen et al.

FEBS JOURNAL (2018)

Article Biochemical Research Methods

A Genetically Encoded Biosensor for Monitoring Isoprene Production in Engineered Escherichia coli

Seong Keun Kim et al.

ACS SYNTHETIC BIOLOGY (2018)

Article Engineering, Multidisciplinary

Enhanced Poly(ethylene terephthalate) Hydrolase Activity by Protein Engineering

Yuan Ma et al.

ENGINEERING (2018)

Article Environmental Sciences

Microplastic in marine organism: Environmental and toxicological effects

Eleonora Guzzetti et al.

ENVIRONMENTAL TOXICOLOGY AND PHARMACOLOGY (2018)

Review Biotechnology & Applied Microbiology

Transcription factor-based biosensors in biotechnology: current state and future prospects

Regina Mahr et al.

APPLIED MICROBIOLOGY AND BIOTECHNOLOGY (2016)

Article Biochemistry & Molecular Biology

A microbial sensor for organophosphate hydrolysis exploiting an engineered specificity switch in a transcription factor

Ramesh K. Jha et al.

NUCLEIC ACIDS RESEARCH (2016)

Article Multidisciplinary Sciences

A bacterium that degrades and assimilates poly(ethylene terephthalate)

Shosuke Yoshida et al.

SCIENCE (2016)

Article Biochemical Research Methods

Toward a Generalized and High-throughput Enzyme Screening System Based on Artificial Genetic Circuits

Su-Lim Choi et al.

ACS SYNTHETIC BIOLOGY (2014)

Article Biochemical Research Methods

A high-throughput assay for enzymatic polyester hydrolysis activity by fluorimetric detection

Ren Wei et al.

BIOTECHNOLOGY JOURNAL (2012)

Review Environmental Sciences

Environmental impact of phthalic acid esters and their removal from water and sediments by different technologies - A review

Mahmoud M. Abdel Daiem et al.

JOURNAL OF ENVIRONMENTAL MANAGEMENT (2012)

Article Biotechnology & Applied Microbiology

Characterization of the terephthalate degradation genes of Comamonas sp strain E6

M Sasoh et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2006)