4.7 Article

Composition change and decreased diversity of microbial eukaryotes in the coastal upwelling waters of South China Sea

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Limnology

What controls microzooplankton biomass and herbivory rate across marginal seas of China?

Kailin Liu et al.

Summary: Through 224 dilution experiments, the study found that the importance of microzooplankton biomass and herbivory rate in the marginal seas of China is still underestimated, and the quantitative relationships between environmental factors and microzooplankton biomass and herbivory rate remain unclear. The research also showed that microzooplankton grazing is influenced by temperature, phytoplankton biomass, and microzooplankton biomass, and that microzooplankton biomass scales proportionally with phytoplankton biomass with a shift in species as phytoplankton biomass increases.

LIMNOLOGY AND OCEANOGRAPHY (2021)

Article Environmental Sciences

Disentangling the structure and function of mycoplankton communities in the context of marine environmental heterogeneity

Kalyani Sen et al.

Summary: This study investigated the composition, guilds, and metabolic potential of mycoplankton communities in contrasting marine environments. It found that trophic status played a major role in determining the abundance of mycoplankton, with different fungal taxa dominating different sites. Environmental factors such as temperature, pH, and chlorophyll-a were strongly associated with spatial diversity patterns. The study broadens the understanding of taxonomic and metabolic repertoire of marine mycoplankton and shows how they are influenced by site-scale environmental heterogeneity.

SCIENCE OF THE TOTAL ENVIRONMENT (2021)

Article Fisheries

Drivers of reef fish assemblages in an upwelling region from the Eastern Tropical Pacific Ocean

Marius H. Eisele et al.

Summary: This study investigated the spatiotemporal patterns of reef fish assemblages in an upwelling region in the North Pacific of Costa Rica using BRUVS and UVC, and found that upwelling played an important role in shaping reef fish assemblages in the region, with significant interactions between upwelling and location, as well as effects from habitat complexity and composition on reef fish abundances and species. This is the first study in the Eastern Tropical Pacific that combines BRUVS and UVC to monitor reef fish assemblages in an upwelling region, providing detailed information to assess the state of reef ecosystems in response to multiple threats and changing ocean conditions.

JOURNAL OF FISH BIOLOGY (2021)

Article Environmental Sciences

Tracing the upwelling process in the northern Benguela upwelling system (nBUS) by 129I

Jose Maria Lopez-Gutierrez et al.

Summary: New data on the presence of I-129 in seawater in the Southern Hemisphere, particularly in the Benguela upwelling system off the Namibian coast, reveal higher concentrations offshore and lower concentrations in deep-sea and inshore samples. The study suggests that the presence of I-129 in the northern Benguela upwelling system is primarily a result of global nuclear weapons fallout, with minimal impact from nuclear fuel reprocessing.

CHEMOSPHERE (2021)

Article Geosciences, Multidisciplinary

Reconciling the Size-Dependence of Marine Particle Sinking Speed

B. B. Cael et al.

Summary: Research shows that sinking particles play a critical role in the ocean's biological pump by sequestering carbon from the atmosphere. However, the sinking speeds of particles are not solely determined by size, but also by other factors, leading to significant variability in parameterizations of particle sinking and fluxes.

GEOPHYSICAL RESEARCH LETTERS (2021)

Article Biotechnology & Applied Microbiology

Annual Partitioning Patterns of Labyrinthulomycetes Protists Reveal Their Multifaceted Role in Marine Microbial Food Webs

Ningdong Xie et al.

Summary: This study focuses on the role of heterotrophic microeukaryotes, particularly the Labyrinthulomycetes, in remineralizing organic material in the coastal ocean. The research reveals distinct community patterns of Labyrinthulomycetes compared to bacteria and fungi, highlighting their potentially multifaceted involvement in marine food webs. The study emphasizes the importance of incorporating heterotrophic microeukaryotes into marine ecosystem models to enhance our understanding of microbial community ecology and broader studies of biogeochemistry and climate change.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2021)

Article Environmental Sciences

Ecological responses of autotrophic microplankton to the eutrophication of the coastal upwelling along the Southwest coast of India

Jyothibabu Retnamma et al.

Summary: Research indicates that the nutrient enrichment of coastal upwelling along the southwest coast of India leads to changes in the morphological characteristics and body size of microautotrophs. During the Southwest Monsoon, these organisms form large colonies to better assimilate nitrate.

ENVIRONMENTAL SCIENCE AND POLLUTION RESEARCH (2021)

Article Marine & Freshwater Biology

Diversity and potential function of bacterial communities in different upwelling systems

Fulin Sun et al.

ESTUARINE COASTAL AND SHELF SCIENCE (2020)

Article Environmental Sciences

Environmental Factors and Pollution Stresses Select Bacterial Populations in Association With Protists

Songbao Zou et al.

FRONTIERS IN MARINE SCIENCE (2020)

Article Marine & Freshwater Biology

Distinct oxygen environments shape picoeukaryote assemblages thriving oxygen minimum zone waters off central Chile

Rodrigo De la Iglesia et al.

JOURNAL OF PLANKTON RESEARCH (2020)

Letter Biotechnology & Applied Microbiology

Reproducible, interactive, scalable and extensible microbiome data science using QIIME 2

Evan Bolyen et al.

NATURE BIOTECHNOLOGY (2019)

Article Oceanography

Oxygen modulates bacterial community composition in the coastal upwelling waters off central Chile

Montserrat Aldunate et al.

DEEP-SEA RESEARCH PART II-TOPICAL STUDIES IN OCEANOGRAPHY (2018)

Article Geosciences, Multidisciplinary

Phytoplankton Community Structure in 2011-2013 Compared to the Extratropical Warming Event of 2014-2015

X. Du et al.

GEOPHYSICAL RESEARCH LETTERS (2018)

Article Biotechnology & Applied Microbiology

Flow Cytometry for Rapid Enumeration and Biomass Quantification of Thraustochytrids in Coastal Seawaters

Yingbo Duan et al.

MICROBES AND ENVIRONMENTS (2018)

Article Multidisciplinary Sciences

High resolution time series reveals cohesive but short-lived communities in coastal plankton

Antonio M. Martin-Platero et al.

NATURE COMMUNICATIONS (2018)

Article Microbiology

Seasonal succession of small planktonic eukaryotes inhabiting surface waters of a coastal upwelling system

Marta Hernandez-Ruiz et al.

ENVIRONMENTAL MICROBIOLOGY (2018)

Article Microbiology

Diatom populations in an upwelling environment decrease silica content to avoid growth limitation

Heather M. McNair et al.

ENVIRONMENTAL MICROBIOLOGY (2018)

Article Multidisciplinary Sciences

Spatial Variability of Picoeukaryotic Communities in the Mariana Trench

Hongmei Jing et al.

SCIENTIFIC REPORTS (2018)

Article Oceanography

Coastal Upwelling Revisited: Ekman, Bakun, and Improved Upwelling Indices for the US West Coast

Michael G. Jacox et al.

JOURNAL OF GEOPHYSICAL RESEARCH-OCEANS (2018)

Article Biodiversity Conservation

Effects of temperature variability on community structure in a natural microbial food web

Axel Zander et al.

GLOBAL CHANGE BIOLOGY (2017)

Article Chemistry, Applied

Degradation of Distillery Lees (Shochu kasu) by Cellulase-Producing Thraustochytrids

Yousuke Taoka et al.

JOURNAL OF OLEO SCIENCE (2017)

Article Biochemical Research Methods

DADA2: High-resolution sample inference from Illumina amplicon data

Benjamin J. Callahan et al.

NATURE METHODS (2016)

Letter Environmental Sciences

Ocean temperatures chronicle the ongoing warming of Earth

Susan Wijffels et al.

NATURE CLIMATE CHANGE (2016)

Article Microbiology

Estimating Protistan Diversity Using High-Throughput Sequencing

Sarah K. Hu et al.

JOURNAL OF EUKARYOTIC MICROBIOLOGY (2015)

Article Marine & Freshwater Biology

Interactions between trophic levels in upwelling and non-upwelling regions during summer monsoon

A. Malik et al.

JOURNAL OF SEA RESEARCH (2015)

Review Multidisciplinary Sciences

Rethinking the marine carbon cycle: Factoring in the multifarious lifestyles of microbes

Alexandra Z. Worden et al.

SCIENCE (2015)

Article Ecology

Global abundance of planktonic heterotrophic protists in the deep ocean

Massimo C. Pernice et al.

ISME JOURNAL (2015)

Article Microbiology

Vibrio diversity and dynamics in the Monterey Bay upwelling region

Sarah Mansergh et al.

FRONTIERS IN MICROBIOLOGY (2014)

Article Marine & Freshwater Biology

A local upwelling controls viral and microbial community structure in South Australian continental shelf waters

James S. Paterson et al.

ESTUARINE COASTAL AND SHELF SCIENCE (2012)

Article Multidisciplinary Sciences

A Global Pattern of Thermal Adaptation in Marine Phytoplankton

Mridul K. Thomas et al.

SCIENCE (2012)

Article Biochemical Research Methods

FLASH: fast length adjustment of short reads to improve genome assemblies

Tanja Magoc et al.

BIOINFORMATICS (2011)

Article Biotechnology & Applied Microbiology

Alkaline lipase activity from the marine protists, thraustochytrids

R. Kanchana et al.

WORLD JOURNAL OF MICROBIOLOGY & BIOTECHNOLOGY (2011)

Article Biotechnology & Applied Microbiology

Metagenomic biomarker discovery and explanation

Nicola Segata et al.

GENOME BIOLOGY (2011)

Article Oceanography

Dinoflagellate cysts in recent sediments from two semi-enclosed areas of the Western Mediterranean Sea subject to high human impact

Cecilia Teodora Satta et al.

DEEP-SEA RESEARCH PART II-TOPICAL STUDIES IN OCEANOGRAPHY (2010)

Article Ecology

Upwelling areas do not guarantee refuge for coral reefs in a warming ocean

Iliana Chollett et al.

MARINE ECOLOGY PROGRESS SERIES (2010)

Article Biochemical Research Methods

BLAST plus : architecture and applications

Christiam Camacho et al.

BMC BIOINFORMATICS (2009)

Review Limnology

Microbial oceanography of the dark ocean's pelagic realm

Javier Aristegui et al.

LIMNOLOGY AND OCEANOGRAPHY (2009)

Article Marine & Freshwater Biology

Scaling-up from nutrient physiology to the size-structure of phytoplankton communities

AJ Irwin et al.

JOURNAL OF PLANKTON RESEARCH (2006)

Review Ecology

The impacts of climate change in coastal marine systems

CDG Harley et al.

ECOLOGY LETTERS (2006)

Article Oceanography

Phytoplankton assemblages in the CoOP-WEST coastal upwelling area

Adria M. Lassiter et al.

DEEP-SEA RESEARCH PART II-TOPICAL STUDIES IN OCEANOGRAPHY (2006)

Review Multidisciplinary Sciences

Viruses in the sea

CA Suttle

NATURE (2005)

Article Geosciences, Multidisciplinary

Possible refugia for reefs in times of environmental stress

B Riegl et al.

INTERNATIONAL JOURNAL OF EARTH SCIENCES (2003)

Article Oceanography

Zooplankton spatial distributions in coastal waters of the northern Arabian Sea, August, 1995

GL Hitchcock et al.

DEEP-SEA RESEARCH PART II-TOPICAL STUDIES IN OCEANOGRAPHY (2002)

Article Ecology

Dynamics of thraustochytrid protists in the water column of the Arabian Sea

S Raghukumar et al.

AQUATIC MICROBIAL ECOLOGY (2001)