4.8 Article

Colonization of gut microbiota by plasmid-carrying bacteria is facilitated by evolutionary adaptation to antibiotic treatment

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Multidisciplinary Sciences

Dynamics of bacterial population growth in biofilms resemble spatial and structural aspects of urbanization

Amauri J. Paula et al.

NATURE COMMUNICATIONS (2020)

Article Multidisciplinary Sciences

Environmental remodeling of human gut microbiota and antibiotic resistome in livestock farms

Jian Sun et al.

NATURE COMMUNICATIONS (2020)

Review Microbiology

Gut Microbiota and Colonization Resistance against Bacterial Enteric Infection

Q. R. Ducarmon et al.

MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS (2019)

Article Microbiology

Indole Signaling at the Host-Microbiota-Pathogen Interface

Aman Kumar et al.

Article Multidisciplinary Sciences

Emergence of plasmid stability under non-selective conditions maintains antibiotic resistance

Tanita Wein et al.

NATURE COMMUNICATIONS (2019)

Article Biochemistry & Molecular Biology

Investigating Evolutionary Rate Variation in Bacteria

Beth Gibson et al.

JOURNAL OF MOLECULAR EVOLUTION (2019)

Review Infectious Diseases

Plasmids carrying antimicrobial resistance genes in Enterobacteriaceae

M. Rozwandowicz et al.

JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY (2018)

Article Ecology

Multicopy plasmids allow bacteria to escape from fitness trade-offs during evolutionary innovation

Jeronimo Rodriguez-Beltran et al.

NATURE ECOLOGY & EVOLUTION (2018)

Article Ecology

Gene expression plasticity as a mechanism of coral adaptation to a variable environment

Carly D. Kenkel et al.

NATURE ECOLOGY & EVOLUTION (2017)

Article Ecology

Multicopy plasmids potentiate the evolution of antibiotic resistance in bacteria

Alvaro San Milian et al.

NATURE ECOLOGY & EVOLUTION (2017)

Article Multidisciplinary Sciences

Quantification of Plasmid Copy Number with Single Colour Droplet Digital PCR

Magdalena Plotka et al.

PLOS ONE (2017)

Article Multidisciplinary Sciences

Persistence and reversal of plasmid-mediated antibiotic resistance

Allison J. Lopatkin et al.

NATURE COMMUNICATIONS (2017)

Article Microbiology

Molecular Basis of Stationary Phase Survival and Applications

Jananee Jaishankar et al.

FRONTIERS IN MICROBIOLOGY (2017)

Article Ecology

Adaptive modulation of antibiotic resistance through intragenomic coevolution

Michael J. Bottery et al.

NATURE ECOLOGY & EVOLUTION (2017)

Article Ecology

Compensatory mutations improve general permissiveness to antibiotic resistance plasmids

Wesley Loftie-Eaton et al.

NATURE ECOLOGY & EVOLUTION (2017)

Article Biochemical Research Methods

SIFT missense predictions for genomes

Robert Vaser et al.

NATURE PROTOCOLS (2016)

Article Biochemistry & Molecular Biology

Survival and Evolution of a Large Multidrug Resistance Plasmid in New Clinical Bacterial Hosts

Andreas Porse et al.

MOLECULAR BIOLOGY AND EVOLUTION (2016)

Article Biochemistry & Molecular Biology

Evolved plasmid-host interactions reduce plasmid interference cost

Hirokazu Yano et al.

MOLECULAR MICROBIOLOGY (2016)

Article Multidisciplinary Sciences

Grad-seq guides the discovery of ProQ as a major small RNA-binding protein

Alexandre Smirnov et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2016)

Article Multidisciplinary Sciences

Positive selection and compensatory adaptation interact to stabilize non-transmissible plasmids

A. San Millan et al.

NATURE COMMUNICATIONS (2014)

Review Microbiology

Bacterial biofilm development as a multicellular adaptation: antibiotic resistance and new therapeutic strategies

Cesar de la Fuente-Nunez et al.

CURRENT OPINION IN MICROBIOLOGY (2013)

Letter Biotechnology & Applied Microbiology

Identification of a 21 amino acid peptide conferring 3-hydroxypropionic acid stress-tolerance to Escherichia coli

T. E. Warnecke et al.

BIOTECHNOLOGY AND BIOENGINEERING (2012)

Article Microbiology

Environmental factors affecting indole production in Escherichia coli

Thi Hiep Han et al.

RESEARCH IN MICROBIOLOGY (2011)

Review Biotechnology & Applied Microbiology

Indole Affects Biofilm Formation in Bacteria

Mingxi Hu et al.

INDIAN JOURNAL OF MICROBIOLOGY (2010)

Article Multidisciplinary Sciences

RNA polymerase mutants found through adaptive evolution reprogram Escherichia coli for optimal growth in minimal media

Tom M. Conrad et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2010)

Review Microbiology

Indole as an intercellular signal in microbial communities

Jin-Hyung Lee et al.

FEMS MICROBIOLOGY REVIEWS (2010)

Article Biochemical Research Methods

The Sequence Alignment/Map format and SAMtools

Heng Li et al.

BIOINFORMATICS (2009)

Review Microbiology

Bacterial Adhesins in Host-Microbe Interactions

Kimberly A. Kline et al.

CELL HOST & MICROBE (2009)

Article Biochemical Research Methods

BreakDancer: an algorithm for high-resolution mapping of genomic structural variation

Ken Chen et al.

NATURE METHODS (2009)

Article Biotechnology & Applied Microbiology

Indole and 7-hydroxyindole diminish Pseudomonas aeruginosa virulence

Jintae Lee et al.

MICROBIAL BIOTECHNOLOGY (2009)

Article Biotechnology & Applied Microbiology

Tight modulation of Escherichia coli bacterial biofilm formation through controlled expression of adhesion factors

Sandra Da Re et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2007)

Article Infectious Diseases

Multidrug resistance pump AcrAB-TolC is required for high-level, Tet(A)-mediated tetracycline resistance in Escherichia coli

Ricardo E. de Cristobal et al.

JOURNAL OF ANTIMICROBIAL CHEMOTHERAPY (2006)

Review Biochemistry & Molecular Biology

Bacterial adhesion and entry into host cells

J Pizarro-Cerdá et al.

Article Microbiology

Spatial organization and composition of the mucosal flora in patients with inflammatory bowel disease

A Swidsinski et al.

JOURNAL OF CLINICAL MICROBIOLOGY (2005)

Article Biochemistry & Molecular Biology

Social and environmental risk factors in the emergence of infectious diseases

RA Weiss et al.

NATURE MEDICINE (2004)

Article Biochemistry & Molecular Biology

Structure-function analysis of the self-recognizing Antigen 43 autotransporter protein from Escherichia coli

P Klemm et al.

MOLECULAR MICROBIOLOGY (2004)

Article Biochemistry & Molecular Biology

Indole can act as an extracellular signal to regulate biofilm formation of Escherichia coli and other indole-producing bacteria

P Di Martino et al.

CANADIAN JOURNAL OF MICROBIOLOGY (2003)

Article Microbiology

Analysis of a complete library of putative drug transporter genes in Escherichia coli

K Nishino et al.

JOURNAL OF BACTERIOLOGY (2001)

Article Multidisciplinary Sciences

Parallel evolution of virulence in pathogenic Escherichia coli

SD Reid et al.

NATURE (2000)