相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。Artificial intelligence for microbial biotechnology: beyond the hype
Serina L. Robinson
MICROBIAL BIOTECHNOLOGY (2022)
The evolution of the antimicrobial peptide database over 18 years: Milestones and new features
Guangshun Wang et al.
PROTEIN SCIENCE (2022)
Identification of transmissible proteotoxic oligomer-like fibrils that expand conformational diversity of amyloid assemblies
Phuong Trang Nguyen et al.
COMMUNICATIONS BIOLOGY (2021)
Therapeutic Potential of Antimicrobial Peptides in Polymicrobial Biofilm-Associated Infections
Giovanna Batoni et al.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2021)
AlphaFold and the amyloid landscape
Francisca Pinheiro et al.
JOURNAL OF MOLECULAR BIOLOGY (2021)
On the Protein Fibrillation Pathway: Oligomer Intermediates Detection Using ATR-FTIR Spectroscopy
Jelica Milosevic et al.
MOLECULES (2021)
Antimicrobial Peptides and Cell-Penetrating Peptides for Treating Intracellular Bacterial Infections
Danieli F. Buccini et al.
FRONTIERS IN CELLULAR AND INFECTION MICROBIOLOGY (2021)
Prediction of Transmembrane Regions, Cholesterol, and Ganglioside Binding Sites in Amyloid-Forming Proteins Indicate Potential for Amyloid Pore Formation
Katja Venko et al.
FRONTIERS IN MOLECULAR NEUROSCIENCE (2021)
Advances in Molecular Understanding of α-Helical Membrane-Active Peptides
Ivo Kabelka et al.
ACCOUNTS OF CHEMICAL RESEARCH (2021)
Sequence and evolutionary analysis of bacterial ribosomal S1 proteins
Evgeniya Deryusheva et al.
PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2021)
Bioinformatics methods for identification of amyloidogenic peptides show robustness to misannotated training data
Natalia Szulc et al.
SCIENTIFIC REPORTS (2021)
Overlapping Properties of the Short Membrane-Active Peptide BP100 With (i) Polycationic TAT and (ii) α-helical Magainin Family Peptides
Christian Mink et al.
FRONTIERS IN CELLULAR AND INFECTION MICROBIOLOGY (2021)
Conformational distortion in a fibril-forming oligomer arrests alpha-Synuclein fibrillation and minimizes its toxic effects
Ritobrita Chakraborty et al.
COMMUNICATIONS BIOLOGY (2021)
An optimized analog of antimicrobial peptide Jelleine-1 shows enhanced antimicrobial activity against multidrug resistant P. aeruginosa and negligible toxicity in vitro and in vivo
Jingjing Zhou et al.
EUROPEAN JOURNAL OF MEDICINAL CHEMISTRY (2021)
Antimicrobial/anticancer peptides: bioactive molecules and therapeutic agents
Kimia Kardani et al.
IMMUNOTHERAPY (2021)
Antimicrobial Peptides with Antibacterial Activity against Vancomycin-Resistant Staphylococcus aureus Strains: Classification, Structures, and Mechanisms of Action
Isabella Hernandez-Aristizabal et al.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2021)
Potent Activity of Hybrid Arthropod Antimicrobial Peptides Linked by Glycine Spacers
Miray Tonk et al.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2021)
Antimicrobial Polymer-Based Assemblies: A Review
Ana Maria Carmona-Ribeiro et al.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2021)
Is It Possible to Create Antimicrobial Peptides Based on the Amyloidogenic Sequence of Ribosomal S1 Protein of P. aeruginosa?
Sergei Y. Grishin et al.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2021)
The Double-Edged Sword of Beta2-Microglobulin in Antibacterial Properties and Amyloid Fibril-Mediated Cytotoxicity
Shean-Jaw Chiou et al.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2021)
Identification of Amyloidogenic Regions in Pseudomonas aeruginosa Ribosomal S1 Protein
Sergei Y. Grishin et al.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2021)
Computational Methods and Tools in Antimicrobial Peptide Research
Pietro G. A. Aronica et al.
JOURNAL OF CHEMICAL INFORMATION AND MODELING (2021)
AlphaFold and Implications for Intrinsically Disordered Proteins
Kiersten M. Ruff et al.
JOURNAL OF MOLECULAR BIOLOGY (2021)
Highly accurate protein structure prediction with AlphaFold
John Jumper et al.
NATURE (2021)
Antimicrobial Peptides: A New Hope in Biomedical and Pharmaceutical Fields
Antonio Moretta et al.
FRONTIERS IN CELLULAR AND INFECTION MICROBIOLOGY (2021)
Antimicrobial Peptides from Amphibian Innate Immune System as Potent Antidiabetic Agents: A Literature Review and Bioinformatics Analysis
Hossein Soltaninejad et al.
JOURNAL OF DIABETES RESEARCH (2021)
Biomedical Relevance of Novel Anticancer Peptides in the Sensitive Treatment of Cancer
Olalekan Olanrewaju Bakare et al.
BIOMOLECULES (2021)
Exploring Amyloidogenicity of Peptides From Ribosomal S1 Protein to Develop Novel AMPs
Oxana Galzitskaya
FRONTIERS IN MOLECULAR BIOSCIENCES (2021)
Antimicrobial Peptides: A Potent Alternative to Antibiotics
Mariam Rima et al.
ANTIBIOTICS-BASEL (2021)
Antimicrobial peptides: mechanism of action, activity and clinical potential
Qi-Yu Zhang et al.
MILITARY MEDICAL RESEARCH (2021)
Regulation of Ribosomal Protein Synthesis in Prokaryotes
A. O. Mikhaylina et al.
MOLECULAR BIOLOGY (2021)
Aggregation Prone Regions in Antibody Sequences Raised Against Vibrio cholerae: A Bioinformatic Approach
Zakia Akter et al.
CURRENT BIOINFORMATICS (2020)
Predicted Loop Regions Promote Aggregation: A Study of Amyloidogenic Domains in the Functional Amyloid FapC
Madhu Nagaraj et al.
JOURNAL OF MOLECULAR BIOLOGY (2020)
Comparative Analysis of Aggregation of Thermus thermophilus Ribosomal Protein bS1 and Its Stable Fragment
S. Yu. Grishin et al.
BIOCHEMISTRY-MOSCOW (2020)
Oligomers Are Promising Targets for Drug Development in the Treatment of Proteinopathies
Oxana Galzitskaya
FRONTIERS IN MOLECULAR NEUROSCIENCE (2020)
PATH - Prediction of Amyloidogenicity by Threading and Machine Learning
Jakub W. Wojciechowski et al.
SCIENTIFIC REPORTS (2020)
The Toxicity and Polymorphism of β-Amyloid Oligomers
Ya-ru Huang et al.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2020)
Amyloidogenic Propensities of Ribosomal S1 Proteins: Bioinformatics Screening and Experimental Checking
Sergei Y. Grishin et al.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2020)
Structure-based machine-guided mapping of amyloid sequence space reveals uncharted sequence clusters with higher solubilities
Nikolaos Louros et al.
NATURE COMMUNICATIONS (2020)
Antimicrobial and Amyloidogenic Activity of Peptides Synthesized on the Basis of the Ribosomal S1 Protein from Thermus Thermophilus
Stanislav R. Kurpe et al.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2020)
The structure of the antimicrobial human cathelicidin LL-37 shows oligomerization and channel formation in the presence of membrane mimics
Enea Sancho-Vaello et al.
SCIENTIFIC REPORTS (2020)
Antimicrobial and Amyloidogenic Activity of Peptides. Can Antimicrobial Peptides Be Used against SARS-CoV-2?
Stanislav R. Kurpe et al.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2020)
Construction, cloning, and expression of Melittin antimicrobial peptide using Pichia pastoris expression system
Khadijeh Moridi et al.
GENE REPORTS (2020)
Why does the Aβ peptide of Alzheimer share structural similarity with antimicrobial peptides?
Annalisa Pastore et al.
COMMUNICATIONS BIOLOGY (2020)
Exploring the aggregation-prone regions from structural domains of human TDP-43
Vijay Kumar et al.
BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS (2019)
Minor sequence modifications in temporin B cause drastic changes in antibacterial potency and selectivity by fundamentally altering membrane activity
Giorgia Manzo et al.
SCIENTIFIC REPORTS (2019)
Optimisation of the Protocol for the LIVE/DEAD® BacLight™Bacterial Viability Kit for Rapid Determination of Bacterial Load
Julia Robertson et al.
FRONTIERS IN MICROBIOLOGY (2019)
The number of domains in the ribosomal protein S1 as a hallmark of the phylogenetic grouping of bacteria
Andrey V. Machulin et al.
PLOS ONE (2019)
Investigation of the Relationship between the S1 Domain and Its Molecular Functions Derived from Studies of the Tertiary Structure
Evgenia Deryusheva et al.
MOLECULES (2019)
The studies of cytotoxicity and antibacterial activity of composites with ZnO-doped bioglass
Lidia Ciolek et al.
INTERNATIONAL JOURNAL OF APPLIED CERAMIC TECHNOLOGY (2019)
Structural dynamics of protein S1 on the 70S ribosome visualized by ensemble cryo-EM
Anna B. Loveland et al.
METHODS (2018)
Anomalous Kinetics of Amyloidogenesis Suggest a Competition between Oligomers and Fibrils
A. V. Finkelstein et al.
MOLECULAR BIOLOGY (2018)
One of the possible mechanisms of amyloid fibrils formation based on the sizes of primary and secondary folding nuclei of Aβ40 and Aβ42
Nikita V. Dovidchenko et al.
JOURNAL OF STRUCTURAL BIOLOGY (2016)
PASTA 2.0: an improved server for protein aggregation prediction
Ian Walsh et al.
NUCLEIC ACIDS RESEARCH (2014)
Phenotypic and Genotypic Characterization of Daptomycin-Resistant Methicillin-Resistant Staphylococcus aureus Strains: Relative Roles of mprF and dlt Operons
Nagendra N. Mishra et al.
PLOS ONE (2014)
In vitro antimicrobial activity of miconazole and polymyxin B against canine meticillin-resistant Staphylococcus aureus and meticillin-resistant Staphylococcus pseudintermedius isolates
Filip Boyen et al.
VETERINARY DERMATOLOGY (2012)
FoldAmyloid: a method of prediction of amyloidogenic regions from protein sequence
Sergiy O. Garbuzynskiy et al.
BIOINFORMATICS (2010)
Waltz, an exciting new move in amyloid prediction
Mikael Oliveberg
NATURE METHODS (2010)
Amyloid-like properties of Saccharomyces cerevisiae cell wall glucantransferase Bgl2p Prediction and experimental evidences
Tatyana S. Kalebina et al.
PRION (2008)
AGGRESCAN:: a server for the prediction and evaluation of hot spots of aggregation in polypeptides
Oscar Conchillo-Sole et al.
BMC BIOINFORMATICS (2007)
Free-energy landscape of a chameleon sequence in explicit water and its inherent alpha/beta bifacial property
K Ikeda et al.
PROTEIN SCIENCE (2003)
β-hairpins, α-helices, and the intermediates among the secondary structures in the energy landscape of a peptide from a distal β-Hairpin of SH3 domain
K Ikeda et al.
JOURNAL OF COMPUTATIONAL CHEMISTRY (2003)
Evaluation of the trifluoromethanosulfonic acid/trifluoroacetic acid/thioanisole cleavage procedure for application in solid-phase peptide synthesis
GN Jubilut et al.
CHEMICAL & PHARMACEUTICAL BULLETIN (2001)