4.5 Article

Phenotypic and genotypic parallel evolution in parapatric ecotypes of Senecio

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Multidisciplinary Sciences

Adaptive divergence in shoot gravitropism creates hybrid sterility in an Australian wildflower

Melanie J. Wilkinson et al.

Summary: Research has shown that adaptive divergence in shoot gravitropism of an Australian wildflower contributes to the evolution of hybrid sterility, suggesting that natural selection can drive the evolution of locally adaptive traits that create new species.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2021)

Article Multidisciplinary Sciences

Genomic basis of parallel adaptation varies with divergence in Arabidopsis and its relatives

Magdalena Bohutinska et al.

Summary: Parallel adaptation provides insight into evolutionary predictability through replicated natural experiments, showing varying levels of genomic parallelism depending on the genetic divergence between lineages. Studies on Arabidopsis species adapting to alpine environments identified 151 genes under positive selection associated with alpine colonization and response to environmental challenges. The extent of genomic parallelism decreases significantly with increasing genetic divergence, driven by the decreasing probability of repeated selection on the same alleles, highlighting the importance of genetic divergence in genome evolution predictability.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2021)

Article Biochemistry & Molecular Biology

Highly Replicated Evolution of Parapatric Ecotypes

Maddie E. James et al.

Summary: This study reveals multiple origins within ecotypes of an Australian wildflower, Senecio lautos, implying that selection can repeatedly create similar phenotypes despite the low level of gene flow between different environments.

MOLECULAR BIOLOGY AND EVOLUTION (2021)

Review Ecology

The Importance of Genetic Redundancy in Evolution

Aki J. Laruson et al.

TRENDS IN ECOLOGY & EVOLUTION (2020)

Article Ecology

A multivariate view of parallel evolution

Stephen P. De Lisle et al.

EVOLUTION (2020)

Article Biochemistry & Molecular Biology

Variation in recombination rate affects detection of outliers in genome scans under neutrality

Tom R. Booker et al.

MOLECULAR ECOLOGY (2020)

Review Genetics & Heredity

Polygenic adaptation: a unifying framework to understand positive selection

Neda Barghi et al.

NATURE REVIEWS GENETICS (2020)

Article Plant Sciences

Parallel Alpine Differentiation in Arabidopsis arenosa

Adam Knotek et al.

FRONTIERS IN PLANT SCIENCE (2020)

Article Biochemistry & Molecular Biology

The impact of transposable elements in adaptive evolution

Lukas Schrader et al.

MOLECULAR ECOLOGY (2019)

Review Plant Sciences

A Molecular View of Plant Local Adaptation: Incorporating Stress-Response Networks

Acer VanWallendael et al.

ANNUAL REVIEW OF PLANT BIOLOGY, VOL 70 (2019)

Article Biochemistry & Molecular Biology

Parallel Speciation of Wild Rice Associated with Habitat Shifts

Zhe Cai et al.

MOLECULAR BIOLOGY AND EVOLUTION (2019)

Review Ecology

Evolving Inversions

Rui Faria et al.

TRENDS IN ECOLOGY & EVOLUTION (2019)

Article Biology

The distribution of epistasis on simple fitness landscapes

Christelle Fraisse et al.

BIOLOGY LETTERS (2019)

Article Biochemistry & Molecular Biology

Extreme copy number variation at a tRNA ligase gene affecting phenology and fitness in yellow monkeyflowers

Thomas C. Nelson et al.

MOLECULAR ECOLOGY (2019)

Article Multidisciplinary Sciences

Parallel colonization of subalpine habitats in the central European mountains by Primula elatior

Veronika Konecna et al.

SCIENTIFIC REPORTS (2019)

Article Ecology

Evolution of Genetic Variance during Adaptive Radiation

Greg M. Walter et al.

AMERICAN NATURALIST (2018)

Article Biochemical Research Methods

Minimap2: pairwise alignment for nucleotide sequences

Heng Li

BIOINFORMATICS (2018)

Review Ecology

(Non)Parallel Evolution

Daniel I. Bolnick et al.

ANNUAL REVIEW OF ECOLOGY, EVOLUTION, AND SYSTEMATICS, VOL 49 (2018)

Article Multidisciplinary Sciences

Population genomics of parallel evolution in gene expression and gene sequence during ecological adaptation

Maria Jose Rivas et al.

SCIENTIFIC REPORTS (2018)

Review Multidisciplinary Sciences

Contingency and determinism in evolution: Replaying life's tape

Zachary D. Blount et al.

SCIENCE (2018)

Article Biochemistry & Molecular Biology

Breaking RAD: an evaluation of the utility of restriction site-associated DNA sequencing for genome scans of adaptation

David B. Lowry et al.

MOLECULAR ECOLOGY RESOURCES (2017)

Article Biochemistry & Molecular Biology

Investigating the extent of parallelism in morphological and genomic divergence among lake trout ecotypes in Lake Superior

Alysse Perreault-Payette et al.

MOLECULAR ECOLOGY (2017)

Article Ecology

How Parallel Is Parallel Evolution? A Comparative Analysis in Fishes

Krista B. Oke et al.

AMERICAN NATURALIST (2017)

Review Biochemistry & Molecular Biology

An Expanded View of Complex Traits: From Polygenic to Omnigenic

Evan A. Boyle et al.

Article Ecology

Diversification across a heterogeneous landscape

Greg M. Walter et al.

EVOLUTION (2016)

Article Biochemistry & Molecular Biology

Parallel Evolution of Copy-Number Variation across Continents in Drosophila melanogaster

Daniel R. Schrider et al.

MOLECULAR BIOLOGY AND EVOLUTION (2016)

Article Ecology

Local Adaptation by Alleles of Small Effect

Sam Yeaman

AMERICAN NATURALIST (2015)

Article Evolutionary Biology

Repeated evolution and the impact of evolutionary history on adaptation

Terry J. Ord et al.

BMC EVOLUTIONARY BIOLOGY (2015)

Review Ecology

The Molecular Basis of Phenotypic Convergence

Erica Bree Rosenblum et al.

ANNUAL REVIEW OF ECOLOGY, EVOLUTION, AND SYSTEMATICS, VOL 45 (2014)

Article Multidisciplinary Sciences

Stick Insect Genomes Reveal Natural Selection's Role in Parallel Speciation

Victor Soria-Carrasco et al.

SCIENCE (2014)

Review Ecology

Advances and limits of using population genetics to understand local adaptation

Peter Tiffin et al.

TRENDS IN ECOLOGY & EVOLUTION (2014)

Article Multidisciplinary Sciences

Parallel evolution of Nicaraguan crater lake cichlid fishes via non-parallel routes

Kathryn R. Elmer et al.

NATURE COMMUNICATIONS (2014)

Article Biochemistry & Molecular Biology

Genomic evidence for the parallel evolution of coastal forms in the Senecio lautus complex

Federico Roda et al.

MOLECULAR ECOLOGY (2013)

Review Genetics & Heredity

The genetic causes of convergent evolution

David L. Stern

NATURE REVIEWS GENETICS (2013)

Article Multidisciplinary Sciences

Convergence in feeding posture occurs through different genetic loci in independently evolved cave populations of Astyanax mexicanus

Johanna E. Kowalko et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2013)

Article Biochemistry & Molecular Biology

The function of ABCB transporters in auxin transport

Misuk Cho et al.

PLANT SIGNALING & BEHAVIOR (2013)

Article Multidisciplinary Sciences

The genomic basis of adaptive evolution in threespine sticklebacks

Felicity C. Jones et al.

NATURE (2012)

Article Biochemical Research Methods

NIH Image to ImageJ: 25 years of image analysis

Caroline A. Schneider et al.

NATURE METHODS (2012)

Article Biology

Population genomics of parallel phenotypic evolution in stickleback across stream-lake ecological transitions

Bruce E. Deagle et al.

PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2012)

Review Biology

The probability of genetic parallelism and convergence in natural populations

Gina L. Conte et al.

PROCEEDINGS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2012)

Article Multidisciplinary Sciences

The Molecular Diversity of Adaptive Convergence

Olivier Tenaillon et al.

SCIENCE (2012)

Review Plant Sciences

Multiple roles for membrane-associated protein trafficking and signaling in gravitropisnn

Allison K. Strohm et al.

FRONTIERS IN PLANT SCIENCE (2012)

Article Ecology

CONVERGENCE, ADAPTATION, AND CONSTRAINT

Jonathan B. Losos

EVOLUTION (2011)

Article Biochemistry & Molecular Biology

Gene Loss and Parallel Evolution Contribute to Species Difference in Flower Color

Stacey D. Smith et al.

MOLECULAR BIOLOGY AND EVOLUTION (2011)

Review Ecology

Adaptation in the age of ecological genomics: insights from parallelism and convergence

Kathryn R. Elmer et al.

TRENDS IN ECOLOGY & EVOLUTION (2011)

Review Genetics & Heredity

Causes and evolutionary significance of genetic convergence

Pascal-Antoine Christin et al.

TRENDS IN GENETICS (2010)

Review Genetics & Heredity

The adaptive role of transposable elements in the Drosophila genome

Josefa Gonzalez et al.

Article Biochemical Research Methods

Systematic and integrative analysis of large gene lists using DAVID bioinformatics resources

Da Wei Huang et al.

NATURE PROTOCOLS (2009)

Editorial Material Biochemistry & Molecular Biology

Bioinformatics enrichment tools: paths toward the comprehensive functional analysis of large gene lists

Da Wei Huang et al.

NUCLEIC ACIDS RESEARCH (2009)

Review Multidisciplinary Sciences

Is Genetic Evolution Predictable?

David L. Stern et al.

SCIENCE (2009)

Review Ecology

Stochasticity in evolution

Thomas Lenormand et al.

TRENDS IN ECOLOGY & EVOLUTION (2009)

Article Genetics & Heredity

PLINK: A tool set for whole-genome association and population-based linkage analyses

Shaun Purcell et al.

AMERICAN JOURNAL OF HUMAN GENETICS (2007)

Article Plant Sciences

Parallel evolution of dwarf ecotypes in the forest tree Eucalyptus globulus

Susan A. Foster et al.

NEW PHYTOLOGIST (2007)

Review Genetics & Heredity

Chromosome inversions, local adaptation and speciation

Mark Kirkpatrick et al.

GENETICS (2006)

Article Genetics & Heredity

Parallel genotypic adaptation: when evolution repeats itself

TE Wood et al.

GENETICA (2005)

Article Biochemistry & Molecular Biology

NCBI Reference Sequence (RefSeq): a curated non-redundant sequence database of genomes, transcripts and proteins

KD Pruitt et al.

NUCLEIC ACIDS RESEARCH (2005)

Review Ecology

Shared and unique features of evolutionary diversification

RB Langerhans et al.

AMERICAN NATURALIST (2004)

Article Biochemistry & Molecular Biology

Phylogeography of a parasitoid wasp (Diaeretiella rapae):: no evidence of host-associated lineages

CF Baer et al.

MOLECULAR ECOLOGY (2004)