相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。A structural framework for DNA replication and transcription through chromatin
Oliver Willhoft et al.
CURRENT OPINION IN STRUCTURAL BIOLOGY (2021)
Twelve years of SAMtools and BCFtools
Petr Danecek et al.
GIGASCIENCE (2021)
Structural basis of nucleosome transcription mediated by Chd1 and FACT
Lucas Farnung et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2021)
SPT5 stabilizes RNA polymerase II , orchestrates transcription cycles, and maintains the enhancer landscape
Shibin Hu et al.
MOLECULAR CELL (2021)
SPT5 stabilization of promoter-proximal RNA polymerase II
Yuki Aoi et al.
MOLECULAR CELL (2021)
Measurement of histone replacement dynamics with genetically encoded exchange timers in yeast
Gilad Yaakov et al.
NATURE BIOTECHNOLOGY (2021)
FACT caught in the act of manipulating the nucleosome
Yang Liu et al.
NATURE (2020)
Transcription through the nucleosome
Tomoya Kujirai et al.
CURRENT OPINION IN STRUCTURAL BIOLOGY (2020)
Structure and mechanism of the RNA polymerase II transcription machinery
Allison C. Schier et al.
GENES & DEVELOPMENT (2020)
Chromatin replication and epigenetic cell memory
Kathleen R. Stewart-Morgan et al.
NATURE CELL BIOLOGY (2020)
Structure of complete Pol II-DSIF-PAF-SPT6 transcription complex reveals RTF1 allosteric activation
Seychelle M. Vos et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2020)
The role of FACT in managing chromatin: disruption, assembly, or repair?
Tim Formosa et al.
NUCLEIC ACIDS RESEARCH (2020)
DNA polymerase α interacts with H3-H4 and facilitates the transfer of parental histones to lagging strands
Zhiming Li et al.
SCIENCE ADVANCES (2020)
Structural insight into nucleosome transcription by RNA polymerase II with elongation factors
Haruhiko Ehara et al.
SCIENCE (2019)
Structural visualization of key steps in nucleosome reorganization by human FACT
Kouta Mayanagi et al.
SCIENTIFIC REPORTS (2019)
Histone Recycling by FACT and Spt6 during Transcription Prevents the Scrambling of Histone Modifications
Celia Jeronimo et al.
CELL REPORTS (2019)
Nucleosomes remember where they were
Steven Henikoff et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2019)
The nucleosome core particle remembers its position through DNA replication and RNA transcription
Gavin Schlissel et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2019)
Spt6 Association with RNA Polymerase II Directs mRNA Turnover During Transcription
Raghuvar Dronamraju et al.
MOLECULAR CELL (2018)
Replication-Coupled Nucleosome Assembly in the Passage of Epigenetic Information and Cell Identity
Albert Serra-Cardona et al.
TRENDS IN BIOCHEMICAL SCIENCES (2018)
Histone H2A-H2B binding by Pol α in the eukaryotic replisome contributes to the maintenance of repressive chromatin
Cecile Evrin et al.
EMBO JOURNAL (2018)
The Mcm2-Ctf4-Polα Axis Facilitates Parental Histone H3-H4 Transfer to Lagging Strands
Haiyun Gan et al.
MOLECULAR CELL (2018)
Structure of activated transcription complex Pol II-DSIF-PAF-SPT6
Seychelle M. Vos et al.
NATURE (2018)
A mechanism for preventing asymmetric histone segregation onto replicating DNA strands
Chuanhe Yu et al.
SCIENCE (2018)
MCM2 promotes symmetric inheritance of modified histones during DNA replication
Nataliya Petryk et al.
SCIENCE (2018)
Structural insights into NusG regulating transcription elongation
Bin Liu et al.
NUCLEIC ACIDS RESEARCH (2017)
Spt5 Plays Vital Roles in the Control of Sense and Antisense Transcription Elongation
Ameet Shetty et al.
MOLECULAR CELL (2017)
Structure of a transcribing RNA polymerase II-DSIF complex reveals a multidentate DNA-RNA clamp
Carrie Bernecky et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2017)
The elongation factor Spt4/5 regulates RNA polymerase II transcription through the nucleosome
John B. Crickard et al.
NUCLEIC ACIDS RESEARCH (2017)
Structure of a transcribing RNA polymerase II-DSIF complex reveals a multidentate DNA-RNA clamp
Carrie Bernecky et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2017)
Integrated molecular mechanism directing nucleosome reorganization by human FACT
Yasuo Tsunaka et al.
GENES & DEVELOPMENT (2016)
Noncoding Transcription Is a Driving Force for Nucleosome Instability in spt16 Mutant Cells
Jianxun Feng et al.
MOLECULAR AND CELLULAR BIOLOGY (2016)
Structure of transcribing mammalian RNA polymerase II
Carrie Bernecky et al.
NATURE (2016)
deepTools2: a next generation web server for deep-sequencing data analysis
Fidel Ramirez et al.
NUCLEIC ACIDS RESEARCH (2016)
The Abundant Histone Chaperones Spt6 and FACT Collaborate to Assemble, Inspect, and Maintain Chromatin Structure in Saccharomyces cerevisiae
Laura McCullough et al.
GENETICS (2015)
A unique binding mode enables MCM2 to chaperone histones H3-H4 at replication forks
Hongda Huang et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2015)
Structural insight into how the human helicase subunit MCM2 may act as a histone chaperone together with ASF1 at the replication fork
Nicolas Richet et al.
NUCLEIC ACIDS RESEARCH (2015)
A unique binding mode enables MCM2 to chaperone histones H3-H4 at replication forks
Hongda Huang et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2015)
A Tale of Chromatin and Transcription in 100 Structures
Patrick Cramer
CELL (2014)
Cdc48 and a ubiquitin ligase drive disassembly of the CMG helicase at the end of DNA replication
Marija Maric et al.
SCIENCE (2014)
Gene promoters dictate histone occupancy within genes
Roberto Perales et al.
EMBO JOURNAL (2013)
Eukaryotic Replisome Components Cooperate to Process Histones During Chromosome Replication
Magdalena Foltman et al.
CELL REPORTS (2013)
Fast gapped-read alignment with Bowtie 2
Ben Langmead et al.
NATURE METHODS (2012)
Regulation of chromatin by histone modifications
Andrew J. Bannister et al.
CELL RESEARCH (2011)
Architecture of the RNA polymerase-Spt4/5 complex and basis of universal transcription processivity
Fuensanta W. Martinez-Rucobo et al.
EMBO JOURNAL (2011)
Biophysical Characterization of the Centromere-specific Nucleosome from Budding Yeast
Isabel J. Kingston et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2011)
Evolution of multisubunit RNA polymerases in the three domains of life
Finn Werner et al.
NATURE REVIEWS MICROBIOLOGY (2011)
The elongation rate of RNA polymerase determines the fate of transcribed nucleosomes
Lacramioara Bintu et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2011)
RNA polymerase and transcription elongation factor Spt4/5 complex structure
Brianna J. Klein et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2011)
Transcript Elongation by RNA Polymerase II
Luke A. Selth et al.
ANNUAL REVIEW OF BIOCHEMISTRY, VOL 79 (2010)
BigWig and BigBed: enabling browsing of large distributed datasets
W. J. Kent et al.
BIOINFORMATICS (2010)
BEDTools: a flexible suite of utilities for comparing genomic features
Aaron R. Quinlan et al.
BIOINFORMATICS (2010)
Histone Chaperone Spt16 Promotes Redeposition of the Original H3-H4 Histories Evicted by Elongating RNA Polymerase
Adil Jamai et al.
MOLECULAR CELL (2009)
An auxin-based degron system for the rapid depletion of proteins in nonplant cells
Kohei Nishimura et al.
NATURE METHODS (2009)
Mechanism of chromatin remodeling and recovery during passage of RNA polymerase II
Olga I. Kulaeva et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2009)
Molecular implementation and physiological roles for histone H3 lysine 4 (H3K4) methylation
Ali Shilatifard
CURRENT OPINION IN CELL BIOLOGY (2008)
The transcriptional landscape of the yeast genome defined by RNA sequencing
Ugrappa Nagalakshmi et al.
SCIENCE (2008)
Chromatin- and Transcription-Related Factors Repress Transcription from within Coding Regions throughout the Saccharomyces cerevisiae Genome
Vanessa Cheung et al.
PLOS BIOLOGY (2008)
Genome-wide replication-independent histone H3 exchange occurs predominantly at promoters and implicates H3K56 acetylation and Asf1
Anne Rufiange et al.
MOLECULAR CELL (2007)
Dynamics of replication-independent histone turnover in budding yeast
Michael F. Dion et al.
SCIENCE (2007)
Continuous histone H2B and transcription-dependent histone H3 exchange in yeast cells outside of replication
Adil Jamai et al.
MOLECULAR CELL (2007)
Protocol for the fast chromatin immunoprecipitation (ChIP) method
Joel D. Nelson et al.
NATURE PROTOCOLS (2006)
Genome-scale profiling of histone H3.3 replacement patterns
Y Mito et al.
NATURE GENETICS (2005)
Replication-independent core histone dynamics at transcriptionally active loci in vivo
C Thiriet et al.
GENES & DEVELOPMENT (2005)
Evidence for nucleosome depletion at active regulatory regions genome-wide
CK Lee et al.
NATURE GENETICS (2004)
Evidence for eviction and rapid deposition of histories upon transcriptional elongation by RNA polymerase II
MA Schwabish et al.
MOLECULAR AND CELLULAR BIOLOGY (2004)
Evidence for distinct mechanisms facilitating transcript elongation through chromatin in vivo
A Kristjuhan et al.
EMBO JOURNAL (2004)
FACT facilitates transcription-dependent nucleosome alteration
R Belotserkovskaya et al.
SCIENCE (2003)
Transcription elongation factors repress transcription initiation from cryptic sites
CD Kaplan et al.
SCIENCE (2003)
Targeted recruitment of set1 histone methylase by elongating pol II provides a localized mark and memory of recent transcriptional activity
HH Ng et al.
MOLECULAR CELL (2003)
Nucleosome remodeling induced by RNA polymerase II: Loss of the H2A/H2B dimer during transcription
ML Kireeva et al.
MOLECULAR CELL (2002)
Kinetics of core histones in living human cells: Little exchange of H3 and H4 and some rapid exchange of H2B
H Kimura et al.
JOURNAL OF CELL BIOLOGY (2001)
分享论文
