相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。Proximity-dependent labeling methods for proteomic profiling in living cells: An update
Justin A. Bosch et al.
WILEY INTERDISCIPLINARY REVIEWS-DEVELOPMENTAL BIOLOGY (2021)
Cell type-selective secretome profiling in vivo
Wei Wei et al.
NATURE CHEMICAL BIOLOGY (2021)
Spatiotemporal profiling of cytosolic signaling complexes in living cells by selective proximity proteomics
Mi Ke et al.
NATURE COMMUNICATIONS (2021)
PUPIL enables mapping and stamping of transient electrical connectivity in developing nervous systems
Shu Xie et al.
CELL REPORTS (2021)
Time-resolved proteomics profiling of the ciliary Hedgehog response
Elena A. May et al.
JOURNAL OF CELL BIOLOGY (2021)
RNA Proximity Labeling: A New Detection Tool for RNA-Protein Interactions
Ronja Weissinger et al.
MOLECULES (2021)
Tripartite synaptomics: Cell-surface proximity labeling in vivo
Tetsuya Takano et al.
NEUROSCIENCE RESEARCH (2021)
Proteomics of protein trafficking by in vivo tissue-specific labeling
Ilia A. Droujinine et al.
NATURE COMMUNICATIONS (2021)
In vivo proximity labeling identifies cardiomyocyte protein networks during zebrafish heart regeneration
Mira Pronobis et al.
ELIFE (2021)
Spatially resolved cell polarity proteomics of a human epiblast model
Sicong Wang et al.
SCIENCE ADVANCES (2021)
Developing Nanodisc-ID for label-free characterizations of membrane proteins
Huan Bao
COMMUNICATIONS BIOLOGY (2021)
From Affinity to Proximity Techniques to Investigate Protein Complexes in Plants
Sandra M. Kerbler et al.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2021)
Proximity Proteomics Has Potential for Extracellular Vesicle Identification
Hisako Kaneda et al.
JOURNAL OF PROTEOME RESEARCH (2021)
A proximity-dependent biotinylation map of a human cell
Christopher D. Go et al.
NATURE (2021)
Strategies for monitoring cell-cell interactions
Tyler J. Bechtel et al.
NATURE CHEMICAL BIOLOGY (2021)
Cell-type and subcellular compartment-specific APEX2 proximity labeling reveals activity-dependent nuclear proteome dynamics in the striatum
V. Dumrongprechachan et al.
NATURE COMMUNICATIONS (2021)
Identification of Endogenous Kinase Substrates by Proximity Labeling Combined with Kinase Perturbation and Phosphorylation Motifs
Tomoya Niinae et al.
MOLECULAR & CELLULAR PROTEOMICS (2021)
Proximity labeling: an emerging tool for probing in planta molecular interactions
Xinxin Yang et al.
PLANT COMMUNICATIONS (2021)
Identification of a Small Probe That Can Be Conjugated to Proteins by Proximity Labeling
Weiping Sun et al.
ACS CHEMICAL BIOLOGY (2020)
Proximity Dependent Biotinylation: Key Enzymes and Adaptation to Proteomics Approaches
Paymany Samavarchi-Tehrani et al.
MOLECULAR & CELLULAR PROTEOMICS (2020)
Mechanism of adrenergic CaV1.2 stimulation revealed by proximity proteomics
Guoxia Liu et al.
NATURE (2020)
ChromID identifies the protein interactome at chromatin marks
Rodrigo Villasenor et al.
NATURE BIOTECHNOLOGY (2020)
Mapping the proximity interaction network of the Rho-family GTPases reveals signalling pathways and regulatory mechanisms
Halil Bagci et al.
NATURE CELL BIOLOGY (2020)
Split-TurboID enables contact-dependent proximity labeling in cells
Kelvin F. Cho et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2020)
Contact-ID, a tool for profiling organelle contact sites, reveals regulatory proteins of mitochondrial-associated membrane formation
Chulhwan Kwak et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2020)
HyperTRIBE uncovers increased MUSASHI-2 RNA binding activity and differential regulation in leukemic stem cells
Diu T. T. Nguyen et al.
NATURE COMMUNICATIONS (2020)
Proximity Labeling Techniques to Study Chromatin
Henning Ummethum et al.
FRONTIERS IN GENETICS (2020)
Chromophore-Assisted Proximity Labeling of DNA Reveals Chromosomal Organization in Living Cells
Tao Ding et al.
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION (2020)
Detecting Tumor Antigen-Specific T Cells via Interaction-Dependent Fucosyl-Biotinylation
Zilei Liu et al.
CELL (2020)
Tissue-Specific Transcription Footprinting Using RNA PoI DamID (RAPID) in Caenorhabditis elegans
Georgina Gomez-Saldivar et al.
GENETICS (2020)
Proximity labeling proteomics reveals critical regulators for inner nuclear membrane protein degradation in plants
Aobo Huang et al.
NATURE COMMUNICATIONS (2020)
RNA-protein interaction mapping via MS2-or Cas13-based APEX targeting
Shuo Han et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2020)
Records of RNA locations in living yeast revealed through covalent marks
Hugo C. Medina-Munoz et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2020)
Development and Comparative Evaluation of Endolysosomal Proximity Labeling-Based Proteomic Methods in Human iPSC-Derived Neurons
Ashley M. Frankenfield et al.
ANALYTICAL CHEMISTRY (2020)
The evolving capabilities of enzyme-mediated proximity labeling
Ying Zhou et al.
CURRENT OPINION IN CHEMICAL BIOLOGY (2020)
DamID as a versatile tool for understanding gene regulation
Gabriel N. Aughey et al.
DEVELOPMENT (2019)
Enzyme-Mediated Intercellular Proximity Labeling for Detecting Cell-Cell Interactions
Yun Ge et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2019)
Multiplexed peroxidase-based electron microscopy labeling enables simultaneous visualization of multiple cell types
Qiyu Zhang et al.
NATURE NEUROSCIENCE (2019)
Expanding APEX2 Substrates for Proximity-Dependent Labeling of Nucleic Acids and Proteins in Living Cells
Ying Zhou et al.
ANGEWANDTE CHEMIE-INTERNATIONAL EDITION (2019)
Atlas of Subcellular RNA Localization Revealed by APEX-Seq
Furqan M. Fazal et al.
CELL (2019)
Proximity RNA Labeling by APEX-Seq Reveals the Organization of Translation Initiation Complexes and Repressive RNA Granules
Alejandro Padron et al.
MOLECULAR CELL (2019)
Mapping spatial transcriptome with light-activated proximity-dependent RNA labeling
Pengchong Wang et al.
NATURE CHEMICAL BIOLOGY (2019)
Directed Evolution of Split APEX2 Peroxidase
Yisu Han et al.
ACS CHEMICAL BIOLOGY (2019)
Mechanistic implications of enhanced editing by a HyperTRIBE RNA-binding protein
Weijin Xu et al.
RNA (2018)
Improved Analysis of RNA Localization by Spatially Restricted Oxidation of RNA-Protein Complexes
Ying Li et al.
BIOCHEMISTRY (2018)
Discovery of proteins associated with a predefined genomic locus via dCas9-APEX-mediated proximity labeling
Samuel A. Myers et al.
NATURE METHODS (2018)
C-BERST: defining subnuclear proteomic landscapes at genomic elements with dCas9-APEX2
Xin D. Gao et al.
NATURE METHODS (2018)
RNA-protein interaction detection in living cells
Muthukumar Ramanathan et al.
NATURE METHODS (2018)
Monitoring T cell-dendritic cell interactions in vivo by intercellular enzymatic labelling
Giulia Pasqual et al.
NATURE (2018)
Efficient proximity labeling in living cells and organisms with TurboID
Tess C. Branon et al.
NATURE BIOTECHNOLOGY (2018)
A proximity-tagging system to identify membrane protein-protein interactions
Qiang Liu et al.
NATURE METHODS (2018)
Proximity-CLIP provides a snapshot of protein-occupied RNA elements in subcellular compartments
Daniel Benhalevy et al.
NATURE METHODS (2018)
Split-BioID: a proximity biotinylation assay for dimerization-dependent protein interactions
Sofie De Munter et al.
FEBS LETTERS (2017)
Split-BioID a conditional proteomics approach to monitor the composition of spatiotemporally defined protein complexes
Isabel Myriam Schopp et al.
NATURE COMMUNICATIONS (2017)
Live-cell mapping of organelle-associated RNAs via proximity biotinylation combined with protein-RNA crosslinking
Pornchai Kaewsapsak et al.
ELIFE (2017)
Photoactivatable protein labeling by singlet oxygen mediated reactions
Tsz-Leung To et al.
BIOORGANIC & MEDICINAL CHEMISTRY LETTERS (2016)
TRIBE: Hijacking an RNA-Editing Enzyme to Identify Cell-Specific Targets of RNA-Binding Proteins
Aoife C. McMahon et al.
CELL (2016)
Direct Proximity Tagging of Small Molecule Protein Targets Using an Engineered NEDD8 Ligase
Zachary B. Hill et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2016)
An improved smaller biotin ligase for BioID proximity labeling
Dae In Kim et al.
MOLECULAR BIOLOGY OF THE CELL (2016)
Directed evolution of APEX2 for electron microscopy and proximity labeling
Stephanie S. Lam et al.
NATURE METHODS (2015)
New Insights into the DT40 B Cell Receptor Cluster Using a Proteomic Proximity Labeling Assay
Xue-Wen Li et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2014)
Cell-Type-Specific Profiling of Gene Expression and Chromatin Binding without Cell Isolation: Assaying RNA Pol II Occupancy in Neural Stem Cells
Tony D. Southall et al.
DEVELOPMENTAL CELL (2013)
Proteomic Mapping of Mitochondria in Living Cells via Spatially Restricted Enzymatic Tagging
Hyun-Woo Rhee et al.
SCIENCE (2013)
A promiscuous biotin ligase fusion protein identifies proximal and interacting proteins in mammalian cells
Kyle J. Roux et al.
JOURNAL OF CELL BIOLOGY (2012)
Engineered ascorbate peroxidase as a genetically encoded reporter for electron microscopy
Jeffrey D. Martell et al.
NATURE BIOTECHNOLOGY (2012)
A proteomics approach to the cell-surface interactome using the enzyme-mediated activation of radical sources reaction
Songlin Jiang et al.
PROTEOMICS (2012)
Two steps forwarduone step back: Advances in affinity purification mass spectrometry of macromolecular complexes
Marlene Oeffinger
PROTEOMICS (2012)
Dicer associates with chromatin to repress genome activity in Schizosaccharomyces pombe
Katrina J. Woolcock et al.
NATURE STRUCTURAL & MOLECULAR BIOLOGY (2011)
DamID in C-elegans reveals longevity-associated targets of DAF-16/FoxO
Eugene Schuster et al.
MOLECULAR SYSTEMS BIOLOGY (2010)
Organelle proteomics experimental designs and analysis
Laurent Gatto et al.
PROTEOMICS (2010)
Biochemical visualization of cell surface molecular clustering in living cells
Norihiro Kotani et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2008)
Detection of in vivo protein-DNA interactions using DamID in mammalian cells
Maartje J. Vogel et al.
NATURE PROTOCOLS (2007)
DamID, a new tool for studying plant chromatin profiling in vivo, and its use to identify putative LHP1 target loci
Sophie Germann et al.
PLANT JOURNAL (2006)
Targeted and proximity-dependent promiscuous protein biotinylation by a mutant Escherichia coli biotin protein ligase
JE Cronan
JOURNAL OF NUTRITIONAL BIOCHEMISTRY (2005)