相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。Opportunities and challenges in long-read sequencing data analysis
Shanika L. Amarasinghe et al.
GENOME BIOLOGY (2020)
Scalable Genome Assembly through Parallel de Bruijn Graph Construction for Multiple k-mers
Kanak Mahadik et al.
SCIENTIFIC REPORTS (2019)
Occurrence of the potent mutagens 2-nitrobenzanthrone and 3-nitrobenzanthrone in fine airborne particles
Aldenor G. Santos et al.
SCIENTIFIC REPORTS (2019)
Analysis of error profiles in deep next-generation sequencing data
Xiaotu Ma et al.
GENOME BIOLOGY (2019)
A comparative evaluation of hybrid error correction methods for error-prone long reads
Shuhua Fu et al.
GENOME BIOLOGY (2019)
Minimap2: pairwise alignment for nucleotide sequences
Heng Li
BIOINFORMATICS (2018)
Some Order Preserving Inequalities for Cross Entropy and Kullback-Leibler Divergence
Mateu Sbert et al.
ENTROPY (2018)
Parallel Attention Mechanisms in Neural Machine Translation
Julian Richard Medina et al.
2018 17TH IEEE INTERNATIONAL CONFERENCE ON MACHINE LEARNING AND APPLICATIONS (ICMLA) (2018)
Canu: scalable and accurate long-read assembly via adaptive k-mer weighting and repeat separation
Sergey Koren et al.
GENOME RESEARCH (2017)
NanoSim: nanopore sequence read simulator based on statistical characterization
Chen Yang et al.
GIGASCIENCE (2017)
Evaluation of the impact of Illumina error correction tools on de novo genome assembly
Mahdi Heydari et al.
BMC BIOINFORMATICS (2017)
Computational complexity of algorithms for sequence comparison, short-read assembly and genome alignment
Shakuntala Baichoo et al.
BIOSYSTEMS (2017)
HALC: High throughput algorithm for long read error correction
Ergude Bao et al.
BMC BIOINFORMATICS (2017)
Denoising DNA deep sequencing data-high-throughput sequencing errors and their correction
David Laehnemann et al.
BRIEFINGS IN BIOINFORMATICS (2016)
Jabba: hybrid error correction for long sequencing reads
Giles Miclotte et al.
ALGORITHMS FOR MOLECULAR BIOLOGY (2016)
A Deep Neural Networks (DNN) Based Models for a Computer Aided Pronunciation Learning System
Mohamed S. Elaraby et al.
SPEECH AND COMPUTER (2016)
A comparative study of k-spectrum-based error correction methods for next-generation sequencing data analysis
Isaac Akogwu et al.
HUMAN GENOMICS (2016)
Assembling large genomes with single-molecule sequencing and locality-sensitive hashing
Konstantin Berlin et al.
NATURE BIOTECHNOLOGY (2015)
Informed and automated k-mer size selection for genome assembly
Rayan Chikhi et al.
BIOINFORMATICS (2014)
Trowel: a fast and accurate error correction module for Illumina sequencing reads
Eun-Cheon Lim et al.
BIOINFORMATICS (2014)
BLESS: Bloom filter-based error correction solution for high-throughput sequencing reads
Yun Heo et al.
BIOINFORMATICS (2014)
LoRDEC: accurate and efficient long read error correction
Leena Salmela et al.
BIOINFORMATICS (2014)
Lighter: fast and memory-efficient sequencing error correction without counting
Li Song et al.
GENOME BIOLOGY (2014)
PBSIM: PacBio reads simulator-toward accurate genome assembly
Yukiteru Ono et al.
BIOINFORMATICS (2013)
Musket: a multistage k-mer spectrum-based error corrector for Illumina sequence data
Yongchao Liu et al.
BIOINFORMATICS (2013)
RACER: Rapid and accurate correction of errors in reads
Lucian Ilie et al.
BIOINFORMATICS (2013)
QUAST: quality assessment tool for genome assemblies
Alexey Gurevich et al.
BIOINFORMATICS (2013)
Oxford Nanopore announcement sets sequencing sector abuzz
Michael Eisenstein
NATURE BIOTECHNOLOGY (2012)
Fast gapped-read alignment with Bowtie 2
Ben Langmead et al.
NATURE METHODS (2012)
ECHO: A reference-free short-read error correction algorithm
Wei-Chun Kao et al.
GENOME RESEARCH (2011)
Reptile: representative tiling for short read error correction
Xiao Yang et al.
BIOINFORMATICS (2010)
A window into third-generation sequencing
Eric E. Schadt et al.
HUMAN MOLECULAR GENETICS (2010)
Simulated annealing for convex optimization
Adam Tauman Kalai et al.
MATHEMATICS OF OPERATIONS RESEARCH (2006)
Computing the initial temperature of simulated annealing
W Ben-Ameur
COMPUTATIONAL OPTIMIZATION AND APPLICATIONS (2004)
A brief history of just-in-time
J Aycock
ACM COMPUTING SURVEYS (2003)
分享论文
