相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。Global prediction of primary liver cancer incidences and mortality in 2040
Chenxi Li et al.
JOURNAL OF HEPATOLOGY (2023)
Role of Host-Mediated Post-Translational Modifications (PTMs) in RNA Virus Pathogenesis
Ramesh Kumar et al.
INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES (2021)
Proteomic Approaches to Study SARS-CoV-2 Biology and COVID-19 Pathology
Paige Haas et al.
JOURNAL OF PROTEOME RESEARCH (2021)
Mass spectrometry-based protein-protein interaction networks for the study of human diseases
Alicia L. Richards et al.
MOLECULAR SYSTEMS BIOLOGY (2021)
Integration of the Drug-Gene Interaction Database (DGIdb 4.0) with open crowdsource efforts
Sharon L. Freshour et al.
NUCLEIC ACIDS RESEARCH (2021)
Ubiquitin-Modified Proteome of SARS-CoV-2-Infected Host Cells Reveals Insights into Virus-Host Interaction and Pathogenesis
Huan Zhang et al.
JOURNAL OF PROTEOME RESEARCH (2021)
SARS-CoV-2 infection remodels the host protein thermal stability landscape
Joel Selkrig et al.
MOLECULAR SYSTEMS BIOLOGY (2021)
Plitidepsin has potent preclinical efficacy against SARS-CoV-2 by targeting the host protein eEF1A
Kris M. White et al.
SCIENCE (2021)
The Role of the Host Ubiquitin System in Promoting Replication of Emergent Viruses
Karl M. Valerdi et al.
VIRUSES-BASEL (2021)
Creating collaboration by breaking down scientific barriers
Jacqueline M. Fabius et al.
CELL (2021)
Multilevel proteomics reveals host perturbations by SARS-CoV-2 and SARS-CoV
Alexey Stukalov et al.
NATURE (2021)
Developing therapeutic approaches for twenty-first-century emerging infectious viral diseases
Rita M. Meganck et al.
NATURE MEDICINE (2021)
Crosstalk Between SUMO and Ubiquitin-Like Proteins: Implication for Antiviral Defense
Mounira K. Chelbi-Alix et al.
FRONTIERS IN CELL AND DEVELOPMENTAL BIOLOGY (2021)
Drug databases and their contributions to drug repurposing
Yosef Masoudi-Sobhanzadeh et al.
GENOMICS (2020)
A paradigm shift in medicine: A comprehensive review of network-based approaches
Federica Conte et al.
BIOCHIMICA ET BIOPHYSICA ACTA-GENE REGULATORY MECHANISMS (2020)
Reconstructing kinase network topologies from phosphoproteomics data reveals cancer-associated rewiring
Maruan Hijazi et al.
NATURE BIOTECHNOLOGY (2020)
The functional landscape of the human phosphoproteome
David Ochoa et al.
NATURE BIOTECHNOLOGY (2020)
A systems approach to infectious disease
Manon Eckhardt et al.
NATURE REVIEWS GENETICS (2020)
Temporal dynamics of protein complex formation and dissociation during human cytomegalovirus infection
Yutaka Hashimoto et al.
NATURE COMMUNICATIONS (2020)
Phosphopeptide enrichment for phosphoproteomic analysis - A tutorial and review of novel materials
Wen Qiu et al.
ANALYTICA CHIMICA ACTA (2020)
Host-Directed Antiviral Therapy
Naveen Kumar et al.
CLINICAL MICROBIOLOGY REVIEWS (2020)
Proteomics of SARS-CoV-2-infected host cells reveals therapy targets
Denisa Bojkova et al.
NATURE (2020)
A SARS-CoV-2 protein interaction map reveals targets for drug repurposing
David E. Gordon et al.
NATURE (2020)
Network-based drug repurposing for novel coronavirus 2019-nCoV/SARS-CoV-2
Yadi Zhou et al.
CELL DISCOVERY (2020)
Cross-linking/mass spectrometry to get a closer view on protein interaction networks
Claudio Iacobucci et al.
CURRENT OPINION IN BIOTECHNOLOGY (2020)
The Global Phosphorylation Landscape of SARS-CoV-2 Infection
Mehdi Bouhaddou et al.
CELL (2020)
Interaction Interface of Mason-Pfizer Monkey Virus Matrix and Envelope Proteins
Jan Prchal et al.
JOURNAL OF VIROLOGY (2020)
Growth Factor Receptor Signaling Inhibition Prevents SARS-CoV-2 Replication
Kevin Klann et al.
MOLECULAR CELL (2020)
A High-Density Human Mitochondrial Proximity Interaction Network
Hana Antonicka et al.
CELL METABOLISM (2020)
SARS-CoV-2 mRNA vaccine design enabled by prototype pathogen preparedness
Kizzmekia S. Corbett et al.
NATURE (2020)
Phase I/II study of COVID-19 RNA vaccine BNT162b1 in adults
Mark J. Mulligan et al.
NATURE (2020)
An mRNA Vaccine against SARS-CoV-2-Preliminary Report
L. A. Jackson et al.
NEW ENGLAND JOURNAL OF MEDICINE (2020)
Exploring the SARS-CoV-2 virus-host-drug interactome for drug repurposing
Sepideh Sadegh et al.
NATURE COMMUNICATIONS (2020)
COVID-19 vaccine BNT162b1 elicits human antibody and TH1 T cell responses
Ugur Sahin et al.
NATURE (2020)
Comparative host-coronavirus protein interaction networks reveal pan-viral disease mechanisms
David E. Gordon et al.
SCIENCE (2020)
Dynamic remodelling of the human host cell proteome and phosphoproteome upon enterovirus infection
Piero Giansanti et al.
NATURE COMMUNICATIONS (2020)
Viral Emerging Diseases: Challenges in Developing Vaccination Strategies
Maria Trovato et al.
FRONTIERS IN IMMUNOLOGY (2020)
Individuating Possibly Repurposable Drugs and Drug Targets for COVID-19 Treatment through Hypothesis-Driven Systems Medicine Using CoVex
Julian Matschinske et al.
ASSAY AND DRUG DEVELOPMENT TECHNOLOGIES (2020)
Proteomic profiling of HIV-1 infection of human CD4+ T cells identifies PSGL-1 as an HIV restriction factor
Ying Liu et al.
NATURE MICROBIOLOGY (2019)
y Heterogeneous translational landscape of the endoplasmic reticulum revealed by ribosome proximity labeling and transcriptome analysis
Alyson M. Hoffman et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2019)
Structure of the gene therapy vector, adeno-associated virus with its cell receptor, AAVR
Nancy L. Meyer et al.
ELIFE (2019)
Recommendations for performing, interpreting and reporting hydrogen deuterium exchange mass spectrometry (HDX-MS) experiments
Glenn R. Masson et al.
NATURE METHODS (2019)
Large-scale Discovery of Substrates of the Human Kinome
Naoyuki Sugiyama et al.
SCIENTIFIC REPORTS (2019)
Common Nodes of Virus-Host Interaction Revealed Through an Integrated Network Analysis
Korbinian Bosl et al.
FRONTIERS IN IMMUNOLOGY (2019)
ChEMBL: towards direct deposition of bioassay data
David Mendez et al.
NUCLEIC ACIDS RESEARCH (2019)
Infectious Disease Threats in the Twenty-First Century: Strengthening the Global Response
David E. Bloom et al.
FRONTIERS IN IMMUNOLOGY (2019)
Drug repurposing: progress, challenges and recommendations
Sudeep Pushpakom et al.
NATURE REVIEWS DRUG DISCOVERY (2019)
DrugBank 5.0: a major update to the DrugBank database for 2018
David S. Wishart et al.
NUCLEIC ACIDS RESEARCH (2018)
Innovation and trends in the development and approval of antiviral medicines: 1987-2017 and beyond
Shuvam Chaudhuri et al.
ANTIVIRAL RESEARCH (2018)
Proximity labeling: spatially resolved proteomic mapping for neurobiology
Shuo Han et al.
CURRENT OPINION IN NEUROBIOLOGY (2018)
Repurposing of Kinase Inhibitors as Broad-Spectrum Antiviral Drugs
Stanford Schor et al.
DNA AND CELL BIOLOGY (2018)
Monoclonal Antibodies against Occludin Completely Prevented Hepatitis C Virus Infection in a Mouse Model
Yoshimi Shimizu et al.
JOURNAL OF VIROLOGY (2018)
mRNA vaccines - a new era in vaccinology
Norbert Pardi et al.
NATURE REVIEWS DRUG DISCOVERY (2018)
The interactome of EBV LMP1 evaluated by proximity-based BioID approach
Mark A. Rider et al.
VIROLOGY (2018)
CRISPR-Cas9 Genetic Analysis of Virus-Host Interactions
Makda Gebre et al.
VIRUSES-BASEL (2018)
CRISPR genetic screens to discover host-virus interactions
William M. McDougall et al.
CURRENT OPINION IN VIROLOGY (2018)
Global Interactomics Uncovers Extensive Organellar Targeting by Zika Virus
Etienne Coyaud et al.
MOLECULAR & CELLULAR PROTEOMICS (2018)
An orthogonal proteomic survey uncovers novel Zika virus host factors
Pietro Scaturro et al.
NATURE (2018)
Efficient proximity labeling in living cells and organisms with TurboID
Tess C. Branon et al.
NATURE BIOTECHNOLOGY (2018)
Recycling of Golgi glycosyltransferases requires direct binding to coatomer
Lin Liu et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2018)
Phosphoproteomic-based kinase profiling early in influenza virus infection identifies GRK2 as antiviral drug target
Emilio Yanguez et al.
NATURE COMMUNICATIONS (2018)
Orchestration of protein acetylation as a toggle for cellular defense and virus replication
L. A. Murray et al.
NATURE COMMUNICATIONS (2018)
A review of network-based approaches to drug repositioning
Maryam Lotfi Shahreza et al.
BRIEFINGS IN BIOINFORMATICS (2018)
Cross-Linking Mass Spectrometry: An Emerging Technology for Interactomics and Structural Biology
Clinton Yu et al.
ANALYTICAL CHEMISTRY (2018)
New drug-strategies to tackle viral-host interactions for the treatment of influenza virus infections
Simonides I. van de Wakker et al.
EUROPEAN JOURNAL OF PHARMACOLOGY (2017)
Exploring and Exploiting Proteome Organization during Viral Infection
Pierre M. Jean Beltran et al.
JOURNAL OF VIROLOGY (2017)
Identification of the SOX2 Interactome by BioID Reveals EP300 as a Mediator of SOX2-dependent Squamous Differentiation and Lung Squamous Cell Carcinoma Growth
Bo Ram Kim et al.
MOLECULAR & CELLULAR PROTEOMICS (2017)
The human cytoplasmic dynein interactome reveals novel activators of motility
William B. Redwine et al.
ELIFE (2017)
Protein-Protein Interactions in Virus-Host Systems
Anderson F. Brito et al.
FRONTIERS IN MICROBIOLOGY (2017)
Virus-Host Interactions: New Insights and Advances in Drug Development Against Viral Pathogens
Minakshi Prasad et al.
CURRENT DRUG METABOLISM (2017)
Post-translational regulation of antiviral innate signaling
Yilong Zhou et al.
EUROPEAN JOURNAL OF IMMUNOLOGY (2017)
An Approach to Spatiotemporally Resolve Protein Interaction Networks in Living Cells
Braden T. Lobingier et al.
CELL (2017)
Cross-linking immunoprecipitation-MS (xIP-MS): Topological Analysis of Chromatin-associated Protein Complexes Using Single Affinity Purification
Matthew M. Makowski et al.
MOLECULAR & CELLULAR PROTEOMICS (2016)
Discovery of cyclosporine A and its analogs as broad-spectrum anti-influenza drugs with a high in vitro genetic barrier of drug resistance
Chunlong Ma et al.
ANTIVIRAL RESEARCH (2016)
Conformational insight into multi-protein signaling assemblies by hydrogen-deuterium exchange mass spectrometry
Rane A. Harrison et al.
CURRENT OPINION IN STRUCTURAL BIOLOGY (2016)
Novel insights into human respiratory syncytial virus-host factor interactions through integrated proteomics and transcriptomics analysis
Clyde Dapat et al.
EXPERT REVIEW OF ANTI-INFECTIVE THERAPY (2016)
Post-Translational Modification Control of Innate Immunity
Juan Liu et al.
IMMUNITY (2016)
An improved smaller biotin ligase for BioID proximity labeling
Dae In Kim et al.
MOLECULAR BIOLOGY OF THE CELL (2016)
Spatially resolved proteomic mapping in living cells with the engineered peroxidase APEX2
Victoria Hung et al.
NATURE PROTOCOLS (2016)
Quantitative phosphoproteomic analysis identifies the critical role of JNK1 in neuroinflammation induced by Japanese encephalitis virus
Jing Ye et al.
SCIENCE SIGNALING (2016)
A draft map of the mouse pluripotent stem cell spatial proteome
Andy Christoforou et al.
NATURE COMMUNICATIONS (2016)
Temporal proteomic analysis of HIV infection reveals remodelling of the host phosphoproteome by lentiviral Vif variants
Edward J. D. Greenwood et al.
ELIFE (2016)
Global, quantitative and dynamic mapping of protein subcellular localization
Daniel N. Itzhak et al.
ELIFE (2016)
Quantitative phosphoproteomic analysis identifies the critical role of JNK1 in neuroinflammation induced by Japanese encephalitis virus
Jing Ye et al.
SCIENCE SIGNALING (2016)
HIV-host interactome revealed directly from infected cells
Yang Luo et al.
NATURE MICROBIOLOGY (2016)
Antiviral drug resistance as an adaptive process
Kristen K. Irwin et al.
VIRUS EVOLUTION (2016)
Proteomic analysis of HIV-1 Gag interacting partners using proximity-dependent biotinylation
Valerie Le Sage et al.
VIROLOGY JOURNAL (2015)
TRIM32 Senses and Restricts Influenza A Virus by Ubiquitination of PB1 Polymerase
Bishi Fu et al.
PLOS PATHOGENS (2015)
VirHostNet 2.0: surfing on the web of virus/host molecular interactions data
Thibaut Guirimand et al.
NUCLEIC ACIDS RESEARCH (2015)
Discovery of Anti-Claudin-1 Antibodies as Candidate Therapeutics against Hepatitis C Virus
Mayo Yamashita et al.
JOURNAL OF PHARMACOLOGY AND EXPERIMENTAL THERAPEUTICS (2015)
Influenza Virus-Host Interactome Screen as a Platform for Antiviral Drug Development
Tokiko Watanabe et al.
CELL HOST & MICROBE (2014)
Phosphoproteomics in drug discovery
Melody K. Morris et al.
DRUG DISCOVERY TODAY (2014)
The cellular thermal shift assay for evaluating drug target interactions in cells
Rozbeh Jafari et al.
NATURE PROTOCOLS (2014)
Hydrogen-exchange mass spectrometry for the study of intrinsic disorder in proteins
Deepa Balasubramaniam et al.
BIOCHIMICA ET BIOPHYSICA ACTA-PROTEINS AND PROTEOMICS (2013)
Human Cytomegalovirus Tegument Protein pUL83 Inhibits IFI16-Mediated DNA Sensing for Immune Evasion
Tuo Li et al.
CELL HOST & MICROBE (2013)
Network-based drug repositioning
Zikai Wu et al.
MOLECULAR BIOSYSTEMS (2013)
Interplay between viruses and host sumoylation pathways
Roger D. Everett et al.
NATURE REVIEWS MICROBIOLOGY (2013)
A common mechanism of clinical HIV-1 resistance to the CCR5 antagonist maraviroc despite divergent resistance levels and lack of common gp120 resistance mutations
Michael Roche et al.
RETROVIROLOGY (2013)
Proteomic Mapping of Mitochondria in Living Cells via Spatially Restricted Enzymatic Tagging
Hyun-Woo Rhee et al.
SCIENCE (2013)
Enrichment techniques employed in phosphoproteomics
Jan Fila et al.
AMINO ACIDS (2012)
Advances in phosphopeptide enrichment techniques for phosphoproteomics
Luisa Beltran et al.
AMINO ACIDS (2012)
Pharmacogenomics Knowledge for Personalized Medicine
M. Whirl-Carrillo et al.
CLINICAL PHARMACOLOGY & THERAPEUTICS (2012)
A promiscuous biotin ligase fusion protein identifies proximal and interacting proteins in mammalian cells
Kyle J. Roux et al.
JOURNAL OF CELL BIOLOGY (2012)
Global landscape of HIV-human protein complexes
Stefanie Jaeger et al.
NATURE (2012)
Viral immune modulators perturb the human molecular network by common and unique strategies
Andreas Pichlmair et al.
NATURE (2012)
Engineered ascorbate peroxidase as a genetically encoded reporter for electron microscopy
Jeffrey D. Martell et al.
NATURE BIOTECHNOLOGY (2012)
Cyclosporin A Inhibits the Influenza Virus Replication through Cyclophilin A-Dependent and -Independent Pathways
Xiaoling Liu et al.
PLOS ONE (2012)
New horizons for antiviral drug discovery from virus-host protein interaction networks
Benoit de Chassey et al.
CURRENT OPINION IN VIROLOGY (2012)
Differential hydrogen/deuterium exchange mass spectrometry analysis of protein-ligand interactions
Michael J. Chalmers et al.
EXPERT REVIEW OF PROTEOMICS (2011)
The SARS-Coronavirus-Host Interactome: Identification of Cyclophilins as Target for Pan-Coronavirus Inhibitors
Susanne Pfefferle et al.
PLOS PATHOGENS (2011)
Drug Resistance in Antiviral Therapy
Stephen Locarnini et al.
CLINICS IN LIVER DISEASE (2010)
A Targeted Spatial-Temporal Proteomics Approach Implicates Multiple Cellular Trafficking Pathways in Human Cytomegalovirus Virion Maturation
Nathaniel J. Moorman et al.
MOLECULAR & CELLULAR PROTEOMICS (2010)
Ebola virus matrix protein VP40 uses the CORII transport system for its intracellular transport
Seiya Yamayoshi et al.
CELL HOST & MICROBE (2008)
Maraviroc: A CCR5-receptor antagonist for the treatment of HIV-1 infection
Sharon S. Lieberman-Blum et al.
CLINICAL THERAPEUTICS (2008)
Identification of cellular interaction partners of the influenza virus ribonucleoprotein complex and polymerase complex using proteomic-based approaches
Daniel Mayer et al.
JOURNAL OF PROTEOME RESEARCH (2007)
Mass spectrometry-based proteomic analysis of the epitope-tag affinity purified protein complexes in eukaryotes
Ing-Feng Chang
PROTEOMICS (2006)
Tracking and elucidating Alphavirus-host protein interactions
Ileana M. Cristea et al.
JOURNAL OF BIOLOGICAL CHEMISTRY (2006)
Identification of subunit-subunit interactions in bacteriophage P22 procapsids by chemical cross-linking and mass spectrometry
S Kang et al.
JOURNAL OF PROTEOME RESEARCH (2006)
Drug repositioning: Identifying and developing new uses for existing drugs
TT Ashburn et al.
NATURE REVIEWS DRUG DISCOVERY (2004)
Protein structure change studied by hydrogen-deuterium exchange, functional labeling, and mass spectrometry
JJ Englander et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2003)