4.2 Review

Brain Connectivity Studies on Structure-Function Relationships: A Short Survey with an Emphasis on Machine Learning

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Neurosciences

A Constrained ICA-EMD Model for Group Level fMRI Analysis

Simon Wein et al.

FRONTIERS IN NEUROSCIENCE (2020)

Article Neurosciences

Using structural connectivity to augment community structure in EEG functional connectivity

Katharina Glomb et al.

NETWORK NEUROSCIENCE (2020)

Article Computer Science, Artificial Intelligence

From local explanations to global understanding with explainable AI for trees

Scott M. Lundberg et al.

NATURE MACHINE INTELLIGENCE (2020)

Review Biology

Chimera states in neuronal networks: A review

Soumen Majhi et al.

PHYSICS OF LIFE REVIEWS (2019)

Article Multidisciplinary Sciences

Scale-free networks are rare

Anna D. Broido et al.

NATURE COMMUNICATIONS (2019)

Article Multidisciplinary Sciences

Discovery of key whole-brain transitions and dynamics during human wakefulness and non-REM sleep

A. B. A. Stevner et al.

NATURE COMMUNICATIONS (2019)

Review Behavioral Sciences

Deep Neural Networks as Scientific Models

Radoslaw M. Cichy et al.

TRENDS IN COGNITIVE SCIENCES (2019)

Article Multidisciplinary Sciences

Cognitive chimera states in human brain networks

Kanika Bansal et al.

SCIENCE ADVANCES (2019)

Review Clinical Neurology

Simultaneous EEG-fMRI for Functional Neurological Assessment

Giulia Mele et al.

FRONTIERS IN NEUROLOGY (2019)

Article Neurosciences

A deep learning framework for neuroscience

Blake A. Richards et al.

NATURE NEUROSCIENCE (2019)

Article Radiology, Nuclear Medicine & Medical Imaging

Temporally constrained ICA with threshold and its application to fMRI data

Zhiying Long et al.

BMC MEDICAL IMAGING (2019)

Proceedings Paper Engineering, Biomedical

Hybridizing EMD with cICA for fMRI Analysis of Patient Groups

S. Wein et al.

2019 41ST ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY (EMBC) (2019)

Proceedings Paper Engineering, Biomedical

Estimation of brain connectivity through Artificial Neural Networks

Yuri Antonacci et al.

2019 41ST ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE AND BIOLOGY SOCIETY (EMBC) (2019)

Proceedings Paper Engineering, Biomedical

Comparison of Brain Networks based on Predictive Models of Connectivity

Fani Deligianni et al.

2019 IEEE 19TH INTERNATIONAL CONFERENCE ON BIOINFORMATICS AND BIOENGINEERING (BIBE) (2019)

Article Mathematical & Computational Biology

Cliques and cavities in the human connectome

Ann E. Sizemore et al.

JOURNAL OF COMPUTATIONAL NEUROSCIENCE (2018)

Review Neurosciences

Dynamic graph metrics: Tutorial, toolbox, and tale

Ann E. Sizemore et al.

NEUROIMAGE (2018)

Review Neurosciences

Modeling and interpreting mesoscale network dynamics

Ankit N. Khambhati et al.

NEUROIMAGE (2018)

Review Neurosciences

Discovering dynamic brain networks from big data in rest and task

Diego Vidaurre et al.

NEUROIMAGE (2018)

Article Neurosciences

Frequency-Resolved Dynamic Functional Connectivity Reveals Scale-Stable Features of Connectivity-States

Markus Goldhacker et al.

FRONTIERS IN HUMAN NEUROSCIENCE (2018)

Review Neurosciences

EEG-Informed fMRI: A Review of Data Analysis Methods

Rodolfo Abreu et al.

FRONTIERS IN HUMAN NEUROSCIENCE (2018)

Article Biochemical Research Methods

GraphVar 2.0: A user-friendly toolbox for machine learning on functional connectivity measures

L. Waller et al.

JOURNAL OF NEUROSCIENCE METHODS (2018)

Article Computer Science, Artificial Intelligence

The Brain Dynamics Toolbox for Matlab

Stewart Heitmann et al.

NEUROCOMPUTING (2018)

Article Neurosciences

Directed functional connectivity using dynamic graphical models

Simon Schwab et al.

NEUROIMAGE (2018)

Editorial Material Neurosciences

Understanding the Brain, By Default

James M. Shine et al.

TRENDS IN NEUROSCIENCES (2018)

Article Multidisciplinary Sciences

Enhancing coherence via tuning coupling range in nonlocally coupled Stuart-Landau oscillators

Nannan Zhao et al.

SCIENTIFIC REPORTS (2018)

Article Multidisciplinary Sciences

Multiple Kernel Learning Model for Relating Structural and Functional Connectivity in the Brain

Sriniwas Govinda Surampudi et al.

SCIENTIFIC REPORTS (2018)

Article Multidisciplinary Sciences

Spectral mapping of brain functional connectivity from diffusion imaging

Cassiano O. Becker et al.

SCIENTIFIC REPORTS (2018)

Article Biochemical Research Methods

Toward a theory of coactivation patterns in excitable neural networks

Arnaud Messe et al.

PLOS COMPUTATIONAL BIOLOGY (2018)

Article Biochemical Research Methods

Simulations to benchmark time-varying connectivity methods for fMRI

William Hedley Thompson et al.

PLOS COMPUTATIONAL BIOLOGY (2018)

Article Multidisciplinary Sciences

Spontaneous cortical activity transiently organises into frequency specific phase-coupling networks

Diego Vidaurre et al.

NATURE COMMUNICATIONS (2018)

Article Neurosciences

Task-Evoked Dynamic Network Analysis Through Hidden Markov Modeling

Andrew J. Quinn et al.

FRONTIERS IN NEUROSCIENCE (2018)

Article Neurosciences

Mapping hybrid functional-structural connectivity traits in the human connectome

Enrico Amico et al.

NETWORK NEUROSCIENCE (2018)

Review Neurosciences

Dynamic models of large-scale brain activity

Michael Breakspear

NATURE NEUROSCIENCE (2017)

Article Neurosciences

The dynamic functional connectome: State-of-the-art and perspectives

Maria Giulia Preti et al.

NEUROIMAGE (2017)

Article Neurosciences

Multi-scale brain networks

Richard F. Betzel et al.

NEUROIMAGE (2017)

Article Neurosciences

Assessing uncertainty in dynamic functional connectivity

Maria Kudela et al.

NEUROIMAGE (2017)

Article Multidisciplinary Sciences

Brain network dynamics are hierarchically organized in time

Diego Vidaurre et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2017)

Review Neurosciences

Criticality in the brain: A synthesis of neurobiology, models and cognition

Luca Cocchi et al.

PROGRESS IN NEUROBIOLOGY (2017)

Article Biochemical Research Methods

Structure-Function Network Mapping and Its Assessment via Persistent Homology

Hualou Liang et al.

PLOS COMPUTATIONAL BIOLOGY (2017)

Article Multidisciplinary Sciences

The dynamics of resting fluctuations in the brain: metastability and its dynamical cortical core

Gustavo Deco et al.

SCIENTIFIC REPORTS (2017)

Article Computer Science, Interdisciplinary Applications

A multi-variate blind source separation algorithmA multi-variate blind source separation algorithm

M. Goldhacker et al.

COMPUTER METHODS AND PROGRAMS IN BIOMEDICINE (2017)

Review Engineering, Biomedical

Dynamics of large-scale fMRI networks: Deconstruct brain activity to build better models of brain function

Fikret Isik Karahanoglu et al.

CURRENT OPINION IN BIOMEDICAL ENGINEERING (2017)

Article Engineering, Electrical & Electronic

Granger Causality in Multivariate Time Series Using a Time-Ordered Restricted Vector Autoregressive Model

Elsa Siggiridou et al.

IEEE TRANSACTIONS ON SIGNAL PROCESSING (2016)

Article Multidisciplinary Sciences

Large-Scale Functional Networks Identified from Resting-State EEG Using Spatial ICA

Stephane Sockeel et al.

PLOS ONE (2016)

Article Multidisciplinary Sciences

NODDI and Tensor-Based Microstructural Indices as Predictors of Functional Connectivity

Fani Deligianni et al.

PLOS ONE (2016)

Article Multidisciplinary Sciences

Analytical Operations Relate Structural and Functional Connectivity in the Brain

Maria Luisa Saggio et al.

PLOS ONE (2016)

Article Neurosciences

A Mapping Between Structural and Functional Brain Networks

Jil Meier et al.

BRAIN CONNECTIVITY (2016)

Article Biochemical Research Methods

GraphVar: A user-friendly toolbox for comprehensive graph analyses of functional brain connectivity

J. D. Kruschwitz et al.

JOURNAL OF NEUROSCIENCE METHODS (2015)

Review Multidisciplinary Sciences

Deep learning

Yann LeCun et al.

NATURE (2015)

Article Neurosciences

Effects of lesions on synchrony and metastability in cortical networks

Frantisek Vasa et al.

NEUROIMAGE (2015)

Editorial Material Multidisciplinary Sciences

Core Concept: Resting-state connectivity

Helen H. Shen

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2015)

Article Mathematical & Computational Biology

A multimodal approach for determining brain networks by jointly modeling functional and structural connectivity

Wenqiong Xue et al.

FRONTIERS IN COMPUTATIONAL NEUROSCIENCE (2015)

Article Clinical Neurology

Characterizing and Differentiating Brain State Dynamics via Hidden Markov Models

Jinli Ou et al.

BRAIN TOPOGRAPHY (2015)

Article Multidisciplinary Sciences

Functional Connectivity in MRI Is Driven by Spontaneous BOLD Events

Thomas W. Allan et al.

PLOS ONE (2015)

Review Mathematics, Interdisciplinary Applications

Assortativity in complex networks

Rogier Noldus et al.

JOURNAL OF COMPLEX NETWORKS (2015)

Article Neurosciences

Tracking Whole-Brain Connectivity Dynamics in the Resting State

Elena A. Allen et al.

CEREBRAL CORTEX (2014)

Article Physics, Multidisciplinary

Explosive oscillation death in coupled Stuart-Landau oscillators

Hongjie Bi et al.

Article Computer Science, Artificial Intelligence

A comparative study and improvement of two ICA using reference signal methods

Jian-Xun Mi et al.

NEUROCOMPUTING (2014)

Article Multidisciplinary Sciences

Temporally and Spatially Constrained ICA of fMRI Data Analysis

Zhi Wang et al.

PLOS ONE (2014)

Article Multidisciplinary Sciences

Anatomical accuracy of brain connections derived from diffusion MRI tractography is inherently limited

Cibu Thomas et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2014)

Review Neurosciences

Exploring the network dynamics underlying brain activity during rest

Joana Cabral et al.

PROGRESS IN NEUROBIOLOGY (2014)

Article Neurosciences

DynamicBC: A MATLAB Toolbox for Dynamic Brain Connectome Analysis

Wei Liao et al.

BRAIN CONNECTIVITY (2014)

Review Neurosciences

Analysing connectivity with Granger causality and dynamic causal modelling

Karl J. Friston et al.

CURRENT OPINION IN NEUROBIOLOGY (2013)

Review Neurosciences

Dynamic changes of ICA-derived EEG functional connectivity in the resting state

Jean-Lon Chen et al.

HUMAN BRAIN MAPPING (2013)

Article Engineering, Electrical & Electronic

Machine Learning with Brain Graphs

Jonas Richiardi et al.

IEEE SIGNAL PROCESSING MAGAZINE (2013)

Article Engineering, Electrical & Electronic

Empirical Mode Decomposition-Based Time-Frequency Analysis of Multivariate Signals

Danilo P. Mandic et al.

IEEE SIGNAL PROCESSING MAGAZINE (2013)

Article Mechanics

Beyond mean field theory: statistical field theory for neural networks

Michael A. Buicel et al.

JOURNAL OF STATISTICAL MECHANICS-THEORY AND EXPERIMENT (2013)

Article Neurosciences

The human connectome: Origins and challenges

Olaf Sporns

NEUROIMAGE (2013)

Article Neurosciences

The WU-Minn Human Connectome Project: An overview

David C. Van Essen et al.

NEUROIMAGE (2013)

Article Neurosciences

Dynamic functional connectivity: Promise, issues, and interpretations

R. Matthew Hutchison et al.

NEUROIMAGE (2013)

Article Neurosciences

Graph analysis of the human connectome: Promise, progress, and pitfalls

Alex Fornito et al.

NEUROIMAGE (2013)

Article Multidisciplinary Sciences

Independent Component Analysis for Brain fMRI Does Indeed Select for Maximal Independence

Vince D. Calhoun et al.

PLOS ONE (2013)

Article Multidisciplinary Sciences

Structural foundations of resting-state and task-based functional connectivity in the human brain

Ann M. Hermundstad et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2013)

Article Mathematical & Computational Biology

The Virtual Brain: a simulator of primate brain network dynamics

Paula Sanz Leon et al.

FRONTIERS IN NEUROINFORMATICS (2013)

Article Neurosciences

The Virtual Brain Integrates Computational Modeling and Multimodal Neuroimaging

Petra Ritter et al.

BRAIN CONNECTIVITY (2013)

Article Mathematical & Computational Biology

Causal Information Approach to Partial Conditioning in Multivariate Data Sets

D. Marinazzo et al.

COMPUTATIONAL AND MATHEMATICAL METHODS IN MEDICINE (2012)

Article Mathematical & Computational Biology

How anatomy shapes dynamics: a semi-analytical study of the brain at rest by a simple spin model

Gustavo Deco et al.

FRONTIERS IN COMPUTATIONAL NEUROSCIENCE (2012)

Article Biochemical Research Methods

A Canonical Model of Multistability and Scale-Invariance in Biological Systems

Frank Freyer et al.

PLOS COMPUTATIONAL BIOLOGY (2012)

Article Psychology, Clinical

Brain Graphs: Graphical Models of the Human Brain Connectome

Edward T. Bullmore et al.

ANNUAL REVIEW OF CLINICAL PSYCHOLOGY (2011)

Article Mathematical & Computational Biology

Transfer entropy-a model-free measure of effective connectivity for the neurosciences

Raul Vicente et al.

JOURNAL OF COMPUTATIONAL NEUROSCIENCE (2011)

Article Radiology, Nuclear Medicine & Medical Imaging

On the Relationship Between Seed-Based and ICA-Based Measures of Functional Connectivity

Suresh E. Joel et al.

MAGNETIC RESONANCE IN MEDICINE (2011)

Article Neurosciences

A baseline for the multivariate comparison of resting-state networks

Elena A. Allen et al.

FRONTIERS IN SYSTEMS NEUROSCIENCE (2011)

Article Neurosciences

The Ubiquity of Small-World Networks

Qawi K. Telesford et al.

BRAIN CONNECTIVITY (2011)

Review Clinical Neurology

Exploring the brain network: A review on resting-state fMRI functional connectivity

Martijn P. van den Heuvel et al.

EUROPEAN NEUROPSYCHOPHARMACOLOGY (2010)

Review Radiology, Nuclear Medicine & Medical Imaging

Graph theoretical analysis of structural and functional connectivity MRI in normal and pathological brain networks

Maxime Guye et al.

MAGNETIC RESONANCE MATERIALS IN PHYSICS BIOLOGY AND MEDICINE (2010)

Article Neurosciences

Complex network measures of brain connectivity: Uses and interpretations

Mikail Rubinov et al.

NEUROIMAGE (2010)

Article Computer Science, Artificial Intelligence

The Positive Matching Index: A new similarity measure with optimal characteristics

Daniel Andres Dos Santos et al.

PATTERN RECOGNITION LETTERS (2010)

Article Multidisciplinary Sciences

White matter maturation reshapes structural connectivity in the late developing human brain

P. Hagmann et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2010)

Article Multidisciplinary Sciences

Multivariate empirical mode decomposition

N. Rehman et al.

PROCEEDINGS OF THE ROYAL SOCIETY A-MATHEMATICAL PHYSICAL AND ENGINEERING SCIENCES (2010)

Article Neurosciences

Using Diffusion Imaging to Study Human Connectional Anatomy

Heidi Johansen-Berg et al.

Annual Review of Neuroscience (2009)

Review Neurosciences

Complex brain networks: graph theoretical analysis of structural and functional systems

Edward T. Bullmore et al.

NATURE REVIEWS NEUROSCIENCE (2009)

Article Multidisciplinary Sciences

Independent component analysis for brain fMRI does not select for independence

I. Daubechies et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)

Article Multidisciplinary Sciences

Key role of coupling, delay, and noise in resting brain fluctuations

Gustavo Deco et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)

Article Multidisciplinary Sciences

Predicting human resting-state functional connectivity from structural connectivity

C. J. Honey et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)

Article Biochemical Research Methods

Modeling the Impact of Lesions in the Human Brain

Jeffrey Alstott et al.

PLOS COMPUTATIONAL BIOLOGY (2009)

Review Biochemistry & Molecular Biology

Exploring the structure and function paradigm

Oliver C. Redfern et al.

CURRENT OPINION IN STRUCTURAL BIOLOGY (2008)

Article Radiology, Nuclear Medicine & Medical Imaging

Estimation of the Orientation Distribution Function from diffusional kurtosis imaging

Mariana Lazar et al.

MAGNETIC RESONANCE IN MEDICINE (2008)

Article Computer Science, Artificial Intelligence

A robust model for spatiotemporal dependencies

Fabian J. Theis et al.

NEUROCOMPUTING (2008)

Article Biochemistry & Molecular Biology

Mapping the structural core of human cerebral cortex

Patric Hagmann et al.

PLOS BIOLOGY (2008)

Review Clinical Neurology

The application of graph theoretical analysis to complex networks in the brain

Jaap C. Reijneveld et al.

CLINICAL NEUROPHYSIOLOGY (2007)

Article Radiology, Nuclear Medicine & Medical Imaging

Performance of blind source separation algorithms for fMRI analysis using a group ICA method

Nicolle Correa et al.

MAGNETIC RESONANCE IMAGING (2007)

Article Computer Science, Artificial Intelligence

ICA with Reference

Wei Lu et al.

NEUROCOMPUTING (2006)

Article Biology

Investigations into resting-state connectivity using independent component analysis

CF Beckmann et al.

PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2005)

Review Biochemical Research Methods

The human connectome: A structural description of the human brain

O Sporns et al.

PLOS COMPUTATIONAL BIOLOGY (2005)

Article Radiology, Nuclear Medicine & Medical Imaging

Comparison of three methods for generating group statistical inferences from independent component analysis of functional magnetic resonance imaging data

VJ Schmithorst et al.

JOURNAL OF MAGNETIC RESONANCE IMAGING (2004)

Article Engineering, Electrical & Electronic

Model-order selection

P Stoica et al.

IEEE SIGNAL PROCESSING MAGAZINE (2004)

Review Neurosciences

Independent component analysis of functional MRI: what is signal and what is noise?

MJ McKeown et al.

CURRENT OPINION IN NEUROBIOLOGY (2003)

Article Neurosciences

ICA of fMRI group study data

M Svensén et al.

NEUROIMAGE (2002)

Article Computer Science, Artificial Intelligence

Blind source separation using temporal predictability

JV Stone

NEURAL COMPUTATION (2001)

Article Multidisciplinary Sciences

A default mode of brain function

ME Raichle et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2001)

Article Engineering, Biomedical

Independent component approach to the analysis of EEG and MEG recordings

R Vigário et al.

IEEE TRANSACTIONS ON BIOMEDICAL ENGINEERING (2000)