4.5 Article

Whole genome sequencing reveals the genomic diversity, taxonomic classification, and evolutionary relationships of the genus Nocardia

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Infectious Diseases

Mycetoma in Uganda: A neglected tropical disease

Richard Kwizera et al.

PLOS NEGLECTED TROPICAL DISEASES (2020)

Review Dermatology

Mycetoma: reviewing a neglected disease

P. Verma et al.

CLINICAL AND EXPERIMENTAL DERMATOLOGY (2019)

Article Biotechnology & Applied Microbiology

Genomic comparison of serogroups O159 and O170 with other Vibrio cholerae serogroups

Zhenpeng Li et al.

BMC GENOMICS (2019)

Article Evolutionary Biology

Phylogenomics Reveals Clear Cases of Misclassification and Genus-Wide Phylogenetic Markers for Acinetobacter

Valeria Mateo-Estrada et al.

GENOME BIOLOGY AND EVOLUTION (2019)

Article Microbiology

Whole-Genome Sequencing Redefines Shewanella Taxonomy

Kaisa Thorell et al.

FRONTIERS IN MICROBIOLOGY (2019)

Article Microbiology

A Genome-Based Species Taxonomy of the Lactobacillus Genus Complex

Stijn Wittouck et al.

MSYSTEMS (2019)

Article Biotechnology & Applied Microbiology

Bioactive molecules from Nocardia: diversity, bioactivities and biosynthesis

Dipesh Dhakal et al.

JOURNAL OF INDUSTRIAL MICROBIOLOGY & BIOTECHNOLOGY (2019)

Article Microbiology

Genome-based evolutionary history of Pseudomonas spp

Cedar Hesse et al.

ENVIRONMENTAL MICROBIOLOGY (2018)

Article Immunology

Nocardiosis from 1888 to 2017

Mehdi Fatahi-Bafghi

MICROBIAL PATHOGENESIS (2018)

Article Biotechnology & Applied Microbiology

Tracking the Taxonomy of the Genus Bifidobacterium Based on a Phylogenomic Approach

Gabriele Andrea Lugli et al.

APPLIED AND ENVIRONMENTAL MICROBIOLOGY (2018)

Review Microbiology

CD Taxonomy, Physiology, and Natural Products of Actinobacteria

Essaid Ait Barka et al.

MICROBIOLOGY AND MOLECULAR BIOLOGY REVIEWS (2016)

Article Immunology

Nocardia Infection in Solid Organ Transplant Recipients: A Multicenter European Case-control Study

Julien Coussement et al.

CLINICAL INFECTIOUS DISEASES (2016)

Article Biochemistry & Molecular Biology

ETE 3: Reconstruction, Analysis, and Visualization of Phylogenomic Data

Jaime Huerta-Cepas et al.

MOLECULAR BIOLOGY AND EVOLUTION (2016)

Article Biochemical Research Methods

Roary: rapid large-scale prokaryote pan genome analysis

Andrew J. Page et al.

BIOINFORMATICS (2015)

Article Biochemistry & Molecular Biology

IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies

Lam-Tung Nguyen et al.

MOLECULAR BIOLOGY AND EVOLUTION (2015)

Article Biochemical Research Methods

Prokka: rapid prokaryotic genome annotation

Torsten Seemann

BIOINFORMATICS (2014)

Article Biotechnology & Applied Microbiology

HGTector: an automated method facilitating genome-wide discovery of putative horizontal gene transfers

Qiyun Zhu et al.

BMC GENOMICS (2014)

Review Microbiology

Functional diversity of Nocardia in metabolism

Quan Luo et al.

ENVIRONMENTAL MICROBIOLOGY (2014)

Article Infectious Diseases

Mycetoma: Experience of 482 Cases in a Single Center in Mexico

Alexandro Bonifaz et al.

PLOS NEGLECTED TROPICAL DISEASES (2014)

Article Biochemical Research Methods

QUAST: quality assessment tool for genome assemblies

Alexey Gurevich et al.

BIOINFORMATICS (2013)

Article Medicine, General & Internal

Nocardiosis: A 15-year experience in a tertiary medical center in Israel

Yossi Rosman et al.

EUROPEAN JOURNAL OF INTERNAL MEDICINE (2013)

Article Infectious Diseases

Molecular Identification of Nocardia Isolates from Clinical Samples and an Overview of Human Nocardiosis in Brazil

Paulo Victor Pereira Baio et al.

PLOS NEGLECTED TROPICAL DISEASES (2013)

Review Infectious Diseases

Global Burden of Human Mycetoma: A Systematic Review and Meta-analysis

Wendy W. J. van de Sande

PLOS NEGLECTED TROPICAL DISEASES (2013)

Article Biochemical Research Methods

CD-HIT: accelerated for clustering the next-generation sequencing data

Limin Fu et al.

BIOINFORMATICS (2012)

Article Biochemical Research Methods

SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing

Anton Bankevich et al.

JOURNAL OF COMPUTATIONAL BIOLOGY (2012)

Article Biochemical Research Methods

pegas: an R package for population genetics with an integrated-modular approach

Emmanuel Paradis

BIOINFORMATICS (2010)

Article Microbiology

Phylogeny and Identification of Nocardia Species on the Basis of Multilocus Sequence Analysis

L. R. McTaggart et al.

JOURNAL OF CLINICAL MICROBIOLOGY (2010)

Article Genetics & Heredity

Digital DNA-DNA hybridization for microbial species delineation by means of genome-to-genome sequence comparison

Alexander F. Auch et al.

STANDARDS IN GENOMIC SCIENCES (2010)

Article Multidisciplinary Sciences

Shifting the genomic gold standard for the prokaryotic species definition

Michael Richter et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2009)

Article Microbiology

Analysis of secA1 gene sequences for identification of Nocardia species

Patricia S. Conville et al.

JOURNAL OF CLINICAL MICROBIOLOGY (2006)

Review Microbiology

Clinical and laboratory features of the Nocardia spp. based on current molecular taxonomy

BA Brown-Elliott et al.

CLINICAL MICROBIOLOGY REVIEWS (2006)

Article Multidisciplinary Sciences

Genomic insights that advance the species definition for prokaryotes

KT Konstantinidis et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2005)

Article Microbiology

Can whole genome analysis refine the taxonomy of the genus Rhodococcus?

V Gürtler et al.

FEMS MICROBIOLOGY REVIEWS (2004)

Review Multidisciplinary Sciences

Lateral gene transfer and the nature of bacterial innovation

H Ochman et al.

NATURE (2000)