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Jorge A. M. de Sousa et al.
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Marie Touchon et al.
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Acquisition of Plasmid with Carbapenem-Resistance Gene blaKPC2 in Hypervirulent Klebsiella pneumoniae, Singapore
Yahua Chen et al.
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ape 5.0: an environment for modern phylogenetics and evolutionary analyses in R
Emmanuel Paradis et al.
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Convergence of virulence and MDR in a single plasmid vector in MDR Klebsiella pneumoniae ST15
Margaret M. C. Lam et al.
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A human gut bacterial genome and culture collection for improved metagenomic analyses
Samuel C. Forster et al.
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A Fast Likelihood Method to Reconstruct and Visualize Ancestral Scenarios
Sohta A. Ishikawa et al.
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A conjugative plasmid that augments virulence in Klebsiella pneumoniae
Xuemei Yang et al.
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Targeting the Sugary Armor of Klebsiella Species
L. Ponoop Prasad Patro et al.
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Manonmani Soundararajan et al.
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Buddhie S. Nanayakkara et al.
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UFBoot2: Improving the Ultrafast Bootstrap Approximation
Diep Thi Hoang et al.
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Host Range and Genetic Plasticity Explain the Coexistence of Integrative and Extrachromosomal Mobile Genetic Elements
Jean Cury et al.
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Diversity-Generating Machines: Genetics of Bacterial Sugar-Coating
Rafal J. Mostowy et al.
TRENDS IN MICROBIOLOGY (2018)
Genetic exchanges are more frequent in bacteria encoding capsules
Olaya Rendueles et al.
PLOS GENETICS (2018)
mlplasmids: a user-friendly tool to predict plasmid- and chromosome-derived sequences for single species
Sergio Arredondo-Alonso et al.
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MMseqs2 enables sensitive protein sequence searching for the analysis of massive data sets
Martin Steinegger et al.
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ModelFinder: fast model selection for accurate phylogenetic estimates
Subha Kalyaanamoorthy et al.
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Unicycler: Resolving bacterial genome assemblies from short and long sequencing reads
Ryan R. Wick et al.
PLOS COMPUTATIONAL BIOLOGY (2017)
Abundance and co-occurrence of extracellular capsules increases environmental breadth: Implications for the emergence of pathogens
Olaya Rendueles et al.
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Two T7-like Bacteriophages, K5-2 and K5-4, Each Encodes Two Capsule Depolymerases: Isolation and Functional Characterization
Pei-Fang Hsieh et al.
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Evolution of bacterial virulence
Mederic Diard et al.
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Embracing the enemy: the diversification of microbial gene repertoires by phage-mediated horizontal gene transfer
Marie Touchon et al.
CURRENT OPINION IN MICROBIOLOGY (2017)
Bacteriophage-encoded virion-associated enzymes to overcome the carbohydrate barriers during the infection process
Agnieszka Latka et al.
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Shiri Navon-Venezia et al.
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Alexander B. Westbye et al.
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PHASTER: a better, faster version of the PHAST phage search tool
David Arndt et al.
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Host receptors for bacteriophage adsorption
Juliano Bertozzi Silva et al.
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Identification of Klebsiella capsule synthesis loci from whole genome data
Kelly L. Wyres et al.
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Mash: fast genome and metagenome distance estimation using MinHash
Brian D. Ondov et al.
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Kelly L. Wyres et al.
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Cheryl P. Andam et al.
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Bin Chang et al.
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Yi-Jiun Pan et al.
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IQ-TREE: A Fast and Effective Stochastic Algorithm for Estimating Maximum-Likelihood Phylogenies
Lam-Tung Nguyen et al.
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Nicholas J. Croucher et al.
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Prokka: rapid prokaryotic genome annotation
Torsten Seemann
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Dense genomic sampling identifies highways of pneumococcal recombination
Claire Chewapreecha et al.
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Bacterial transformation: distribution, shared mechanisms and divergent control
Calum Johnston et al.
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The Adaptation of Temperate Bacteriophages to Their Host Genomes
Louis-Marie Bobay et al.
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MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
Kazutaka Katoh et al.
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Quorum-sensing regulation of a capsular polysaccharide receptor for the Rhodobacter capsulatus gene transfer agent (RcGTA)
Cedric A. Brimacombe et al.
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Nanomechanics measurements of live bacteria reveal a mechanism for bacterial cell protection: the polysaccharide capsule in Klebsiella is a responsive polymer hydrogel that adapts to osmotic stress
Huabin Wang et al.
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On the meaning and estimation of plasmid transfer rates for surface-associated and well-mixed bacterial populations
Xue Zhong et al.
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Gene transfer agents: phage-like elements of genetic exchange
Andrew S. Lang et al.
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phangorn: phylogenetic analysis in R
Klaus Peter Schliep
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Count: evolutionary analysis of phylogenetic profiles with parsimony and likelihood
Miklos Csuroes
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Lionel Ferrieres et al.
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Conjugative DNA metabolism in Gram-negative bacteria
Fernando de la Cruz et al.
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BLAST plus : architecture and applications
Christiam Camacho et al.
BMC BIOINFORMATICS (2009)
Escherichia coli genes affecting recipient ability in plasmid conjugation: Are there any?
Daniel Perez-Mendoza et al.
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Restricting ciprofloxacin-induced resistant variant formation in biofilm of Klebsiella pneumoniae B5055 by complementary bacteriophage treatment
Vivek Verma et al.
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Federal funding for the study of antimicrobial resistance in nosocomial pathogens: No ESKAPE
Louis B. Rice
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ISfinder: the reference centre for bacterial insertion sequences
P. Siguier et al.
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Noncapsulated Klebsiella pneumoniae bearing mannose-containing O antigens is rapidly eradicated from mouse lung and triggers cytokine production by macrophages following opsonization with surfactant protein D
E Kostina et al.
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Capsular expression in Streptococcus pneumoniae negatively affects spontaneous and antibiotic-induced lysis and contributes to antibiotic tolerance
J Fernebro et al.
JOURNAL OF INFECTIOUS DISEASES (2004)
Capsule polysaccharide mediates bacterial resistance to antimicrobial peptides
MA Campos et al.
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Molecular analysis of the contribution of the capsular polysaccharide and the lipopolysaccharide O side chain to the virulence of Klebsiella pneumoniae in a murine model of pneumonia
G Cortés et al.
INFECTION AND IMMUNITY (2002)
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