The basis of easy controllability in Boolean networks

Boolean networks allow a simplified representation of interactions. Here, the authors systematically analyze regulation in dozens of biological Boolean networks, finding mathematical regularities that suggest biological systems could be controlled through a relatively small number of components. Effective control of biological systems can often be achieved through the control of a surprisingly small number of distinct variables. We bring clarity to such results using the formalism of Boolean dynamical networks, analyzing the effectiveness of external control in selecting a desired final state when that state is among the original attractors of the dynamics. Analyzing 49 existing biological network models, we find strong numerical evidence that the average number of nodes that must be forced scales logarithmically with the number of original attractors. This suggests that biological networks may be typically easy to control even when the number of interacting components is large. We provide a theoretical explanation of the scaling by separating controlling nodes into three types: those that act as inputs, those that distinguish among attractors, and any remaining nodes. We further identify characteristics of dynamics that can invalidate this scaling, and speculate about how this relates more broadly to non-biological systems.

Automated summary

Boolean networks simplify the representation of interactions in biological systems and suggest that biological systems could be controlled through a relatively small number of components. Analysis of 49 biological network models shows that the average number of forced nodes scales logarithmically with the number of original attractors, indicating that biological networks are generally easy to control. This scaling can be explained by categorizing controlling nodes into three types and understanding dynamics characteristics that can affect control.