Novel putative polyethylene terephthalate (PET) plastic degrading enzymes from the environmental metagenome

Several plastic degrading enzymes have been described in the literature, most notably PETases that are capable of hydrolyzing polyethylene terephthalate (PET) plastic. One of them, the PETase from Ideonella sakaiensis, a bacterium isolated from environmental samples within a PET bottle recycling site, was a subject of extensive studies. To test how widespread PETase functionality is in other bacterial communities, we used a cascade of BLAST searches in the JGI metagenomic datasets and showed that close homologs of I. sakaiensis PETase can also be found in other metagenomic environmental samples from both human-affected and relatively pristine sites. To confirm their classification as putative PETases, we verified that the newly identified proteins have the PETase sequence signatures common to known PETases and that phylogenetic analyses group them with the experimentally characterized PETases. Additionally, docking analysis was performed in order to further confirm the functional assignment of the putative environmental PETases.

Automated summary

A study investigated a PETase enzyme from environmental samples and its distribution in other bacterial communities, identifying similar homologs in JGI metagenomic datasets through BLAST searches. By verifying the protein sequences and conducting phylogenetic analyses, it confirmed that these proteins are putative PETases, and docking analysis further confirmed their functional assignment.