相关参考文献
注意：仅列出部分参考文献，下载原文获取全部文献信息。IQ-TREE 2: New Models and Efficient Methods for Phylogenetic Inference in the Genomic Era
Bui Quang Minh et al.
MOLECULAR BIOLOGY AND EVOLUTION (2020)
Ophiostomatoid fungi associated with mites phoretic on bark beetles in Qinghai, China
Runlei Chang et al.
IMA FUNGUS (2020)
Disease-free monoculture farming by fungus-growing termites
Saria Otani et al.
SCIENTIFIC REPORTS (2019)
UFBoot2: Improving the Ultrafast Bootstrap Approximation
Diep Thi Hoang et al.
MOLECULAR BIOLOGY AND EVOLUTION (2018)
Know your farmer: Ancient origins and multiple independent domestications of ambrosia beetle fungal cultivars
Dan Vanderpool et al.
MOLECULAR ECOLOGY (2018)
Nine draft genome sequences of Claviceps purpurea s.lat., including C. arundinis, C. humidiphila, and C. cf. spartinae, pseudomolecules for the pitch canker pathogen Fusarium circinatum, draft genome of Davidsoniella eucalypti, Grosmannia galeiformis, Quambalaria eucalypti, and Teratosphaeria destructans
Brenda D. Wingfield et al.
IMA FUNGUS (2018)
A genomic comparison of putative pathogenicity-related gene families in five members of the Ophiostomatales with different lifestyles
Ljerka Lah et al.
FUNGAL BIOLOGY (2017)
Ambrosia beetle Premnobius cavipennis (Scolytinae: Ipini) carries highly divergent ascomycotan ambrosia fungus, Afroraffaelea ambrosiae gen. nov et sp nov (Ophiostomatales)
Craig Bateman et al.
FUNGAL ECOLOGY (2017)
Draft genome of Cercospora zeina, Fusarium pininemorale, Hawksworthiomyces lignivorus, Huntiella decipiens and Ophiostoma ips
Brenda D. Wingfield et al.
IMA FUNGUS (2017)
Contentious relationships in phylogenomic studies can be driven by a handful of genes
Xing-Xing Shen et al.
NATURE ECOLOGY & EVOLUTION (2017)
Novel ophiostomatalean fungi from galleries of Cyrtogenius africus (Scolytinae) infesting dying Euphorbia ingens
Johannes Alwyn van der Linde et al.
ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY (2016)
Hawksworthiomyces gen. nov (Ophiostomatales), illustrates the urgency for a decision on how to name novel taxa known only from environmental nucleic acid sequences (ENAS)
Z. Wilhelm De Beer et al.
FUNGAL BIOLOGY (2016)
Whole-Genome Sequencing and In Silico Analysis of Two Strains of Sporothrix globosa
Lilin Huang et al.
GENOME BIOLOGY AND EVOLUTION (2016)
The divorce of Sporothrix and Ophiostoma: solution to a problematic relationship
Z. W. de Beer et al.
STUDIES IN MYCOLOGY (2016)
Draft genome sequences of Armillaria fuscipes, Ceratocystiopsis minuta, Ceratocystis adiposa, Endoconidiophora laricicola, E-polonica and Penicillium freii DAOMC 242723
Brenda D. Wingfield et al.
IMA FUNGUS (2016)
Draft genome sequences for Ceratocystis fagacearum, C-harringtonii, Grosmannia penicillata, and Huntiella bhutanensis
Brenda D. Wingfield et al.
IMA FUNGUS (2016)
Draft Genome Sequence of the Dimorphic Fungus Sporothrix pallida, a Nonpathogenic Species Belonging to Sporothrix, a Genus Containing Agents of Human and Feline Sporotrichosis
Enrico D'Alessandro et al.
GENOME ANNOUNCEMENTS (2016)
Draft Genome Sequence of Raffaelea quercivora JCM 11526, a Japanese Oak Wilt Pathogen Associated with the Platypodid Beetle, Platypus quercivorus
Hayato Masuya et al.
GENOME ANNOUNCEMENTS (2016)
Distinctive expansion of gene families associated with plant cell wall degradation, secondary metabolism, and nutrient uptake in the genomes of grapevine trunk pathogens
Abraham Morales-Cruz et al.
BMC GENOMICS (2015)
One fungus, which genes? Development and assessment of universal primers for potential secondary fungal DNA barcodes
J. B. Stielow et al.
PERSOONIA (2015)
Draft genome sequences of Ceratocystis eucalypticola, Chrysoporthe cubensis, C. deuterocubensis, Davidsoniella virescens, Fusarium temperatum, Graphilbum fragrans, Penicillium nordicum, and Thielaviopsis musarum
[Anonymous]
IMA FUNGUS (2015)
Draft genome sequences of Chrysoporthe austroafricana, Diplodia scrobiculata, Fusarium nygamai, Leptographium lundbergii, Limonomyces culmigenus, Stagonosporopsis tanaceti, and Thielaviopsis punctulata
Brenda D. Wingfield et al.
IMA FUNGUS (2015)
Taxonomy and phylogeny of the Leptographium procerum complex, including Leptographium sinense sp nov and Leptographium longiconidiophorum sp nov.
Mingliang Yin et al.
ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY (2015)
ASTRAL: genome-scale coalescent-based species tree estimation
S. Mirarab et al.
BIOINFORMATICS (2014)
Trimmomatic: a flexible trimmer for Illumina sequence data
Anthony M. Bolger et al.
BIOINFORMATICS (2014)
Redefining Ceratocystis and allied genera
Z. W. de Beer et al.
STUDIES IN MYCOLOGY (2014)
Draft genome sequences of Diplodia sapinea, Ceratocystis manginecans, and Ceratocystis moniliformis
Magriet A. van der Nest et al.
IMA FUNGUS (2014)
Sequencing and annotation of the Ophiostoma ulmi genome
Shima Khoshraftar et al.
BMC GENOMICS (2013)
The genome and transcriptome of the pine saprophyte Ophiostoma piceae, and a comparison with the bark beetle-associated pine pathogen Grosmannia clavigera
Sajeet Haridas et al.
BMC GENOMICS (2013)
Characterization of the mating-type genes in Leptographium procerum and Leptographium profanum
Tuan A. Duong et al.
FUNGAL BIOLOGY (2013)
MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability
Kazutaka Katoh et al.
MOLECULAR BIOLOGY AND EVOLUTION (2013)
MEGA6: Molecular Evolutionary Genetics Analysis Version 6.0
Koichiro Tamura et al.
MOLECULAR BIOLOGY AND EVOLUTION (2013)
Inferring ancient divergences requires genes with strong phylogenetic signals
Leonidas Salichos et al.
NATURE (2013)
SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing
Anton Bankevich et al.
JOURNAL OF COMPUTATIONAL BIOLOGY (2012)
Phylogeny and taxonomy of species in the Grosmannia serpens complex
Tuan A. Duong et al.
MYCOLOGIA (2012)
raxmlGUI: a graphical front-end for RAxML
Daniele Silvestro et al.
ORGANISMS DIVERSITY & EVOLUTION (2012)
Reply to Kiss: Internal transcribed spacer (ITS) remains the best candidate as a universal DNA barcode marker for Fungi despite imperfections
Conrad L. Schoch et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2012)
Toward almost closed genomes with GapFiller
Marten Boetzer et al.
GENOME BIOLOGY (2012)
Ecological and Evolutionary Determinants of Bark Beetle —Fungus Symbioses
Diana L. Six
Insects (2012)
Scaffolding pre-assembled contigs using SSPACE
Marten Boetzer et al.
BIOINFORMATICS (2011)
Pseudoxylaria as stowaway of the fungus-growing termite nest: Interaction asymmetry between Pseudoxylaria, Termitomyces and free-living relatives
Anna A. Visser et al.
FUNGAL ECOLOGY (2011)
The Amsterdam Declaration on Fungal Nomenclature
David L. Hawksworth et al.
IMA FUNGUS (2011)
FASconCAT: Convenient handling of data matrices
Patrick Kueck et al.
MOLECULAR PHYLOGENETICS AND EVOLUTION (2010)
New combinations in Raffaelea, Ambrosiella, and Hyalorhinocladiella, and four new species from the redbay ambrosia beetle, Xyleborus glabratus
T. C. Harrington et al.
MYCOTAXON (2010)
Two new Ophiostoma species from Protea caffra in Zambia
F. Roets et al.
PERSOONIA (2010)
trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses
Salvador Capella-Gutierrez et al.
BIOINFORMATICS (2009)
Levels of specificity of Xylaria species associated with fungus-growing termites: a phylogenetic approach
A. A. Visser et al.
MOLECULAR ECOLOGY (2009)
Multigene phylogeny of filamentous ambrosia fungi associated with ambrosia and bark beetles
Sepideh Massoumi Alamouti et al.
MYCOLOGICAL RESEARCH (2009)
Taxonomy and phylogeny of new wood- and soil-inhabiting Sporothrix species in the Ophiostoma stenoceras-Sporothrix schenckii complex
Elsie M. de Meyer et al.
MYCOLOGIA (2008)
RAxML-VI-HPC: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models
Alexandros Stamatakis
BIOINFORMATICS (2006)
MrBayes 3: Bayesian phylogenetic inference under mixed models
F Ronquist et al.
BIOINFORMATICS (2003)
The genome sequence of the filamentous fungus Neurospora crassa
JE Galagan et al.
NATURE (2003)
Selection of conserved blocks from multiple alignments for their use in phylogenetic analysis
J Castresana
MOLECULAR BIOLOGY AND EVOLUTION (2000)
分享论文
