4.6 Article

Growth faltering regardless of chronic diarrhea is associated with mucosal immune dysfunction and microbial dysbiosis in the gut lumen

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Immunology

Perturbation of the gut microbiome by Prevotella spp. enhances host susceptibility to mucosal inflammation

Aida Iljazovic et al.

Summary: The colonization of the intestinal microbiota with Prevotella genus has been linked to exacerbation of intestinal inflammation in mice. This study found that Prevotella intestinalis alters the composition and function of the ecosystem, leading to a reduction in short-chain fatty acids, specifically acetate, and a decrease in IL-18 levels, which exacerbates intestinal inflammation. Supplementation of IL-18 can alleviate the inflammation associated with Prevotella colonization.

MUCOSAL IMMUNOLOGY (2021)

Article Multidisciplinary Sciences

Macrophage cytokine responses to commensal Gram-positive Lactobacillus salivarius strains are TLR2-independent and Myd88-dependent

Sreeram Udayan et al.

Summary: TLRs are pattern recognition receptors that can distinguish between commensal and pathogenic bacteria, with TLR2/6 triggering cytokine responses to Gram-positive and Gram-negative pathogens. Different commensal Gram-positive bacteria may have varying requirements for TLR2-dependency in triggering macrophage cytokine responses.

SCIENTIFIC REPORTS (2021)

Article Multidisciplinary Sciences

Vaccine-mediated protection against Campylobacter-associated enteric disease

Benjamin K. Quintel et al.

SCIENCE ADVANCES (2020)

Article Immunology

ImmGen at 15

Stephanie Vargas Aguilar et al.

NATURE IMMUNOLOGY (2020)

Article Multidisciplinary Sciences

Effects of microbiota-directed foods in gnotobiotic animals and undernourished children

Jeanette L. Gehrig et al.

SCIENCE (2019)

Article Biotechnology & Applied Microbiology

Maturation of the infant rhesus macaque gut microbiome and its role in the development of diarrheal disease

Nicholas Rhoades et al.

GENOME BIOLOGY (2019)

Article Gastroenterology & Hepatology

CD16(+) Macrophages Mediate Fibrosis in Inflammatory Bowel Disease

Pedro Salvador et al.

JOURNAL OF CROHNS & COLITIS (2018)

Article Medicine, General & Internal

Azithromycin to Reduce Childhood Mortality in Sub-Saharan Africa

J. D. Keenan et al.

NEW ENGLAND JOURNAL OF MEDICINE (2018)

Article Infectious Diseases

The other Campylobacters: Not innocent bystanders in endemic diarrhea and dysentery in children in low-income settings

Ruthly Francois et al.

PLOS NEGLECTED TROPICAL DISEASES (2018)

Article Multidisciplinary Sciences

Stunted childhood growth is associated with decompartmentalization of the gastrointestinal tract and overgrowth of oropharyngeal taxa

Pascale Vonaesch et al.

PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2018)

Article Gastroenterology & Hepatology

BDNF modulates intestinal barrier integrity through regulating the expression of tight junction proteins

Y. -B. Yu et al.

NEUROGASTROENTEROLOGY AND MOTILITY (2017)

Review Immunology

Tissue compartmentalization of T cell responses during early life

Kyra D. Zens et al.

SEMINARS IN IMMUNOPATHOLOGY (2017)

Article Immunology

Distinctive Gut Microbiota Is Associated with Diarrheagenic Escherichia coli Infections in Chilean Children

Pablo Gallardo et al.

FRONTIERS IN CELLULAR AND INFECTION MICROBIOLOGY (2017)

Article Immunology

Probiotic Lactobacillus Strains Stimulate the Inflammatory Response and Activate Human Macrophages

L. M. Rocha-Ramirez et al.

JOURNAL OF IMMUNOLOGY RESEARCH (2017)

Article Public, Environmental & Occupational Health

Direct Biomarkers of Microbial Translocation Correlate with Immune Activation in Adult Zambians with Environmental Enteropathy and Hepatosplenic Schistosomiasis

Patrick Kaonga et al.

AMERICAN JOURNAL OF TROPICAL MEDICINE AND HYGIENE (2017)

Article Biochemical Research Methods

ImmQuant: a user-friendly tool for inferring immune cell-type composition from gene-expression data

Amit Frishberg et al.

BIOINFORMATICS (2016)

Article Biochemical Research Methods

DADA2: High-resolution sample inference from Illumina amplicon data

Benjamin J. Callahan et al.

NATURE METHODS (2016)

Article Gastroenterology & Hepatology

Environmental Enteric Dysfunction Includes a Broad Spectrum of Inflammatory Responses and Epithelial Repair Processes

Jinsheng Yu et al.

CELLULAR AND MOLECULAR GASTROENTEROLOGY AND HEPATOLOGY (2016)

Article Biochemistry & Molecular Biology

CheckM: assessing the quality of microbial genomes recovered from isolates, single cells, and metagenomes

Donovan H. Parks et al.

GENOME RESEARCH (2015)

Review Biology

Vaccines against enteric infections for the developing world

Cecil Czerkinsky et al.

PHILOSOPHICAL TRANSACTIONS OF THE ROYAL SOCIETY B-BIOLOGICAL SCIENCES (2015)

Article Public, Environmental & Occupational Health

Pathogen-specific burdens of community diarrhoea in developing countries: a multisite birth cohort study (MAL-ED)

James A. Platts-Mills et al.

LANCET GLOBAL HEALTH (2015)

Article Medicine, General & Internal

Environmental Enteropathy, Oral Vaccine Failure and Growth Faltering in Infants in Bangladesh

Caitlin Naylor et al.

EBIOMEDICINE (2015)

Article Biochemical Research Methods

UniRef clusters: a comprehensive and scalable alternative for improving sequence similarity searches

Baris E. Suzek et al.

BIOINFORMATICS (2015)

Review Medicine, General & Internal

Interventions to improve water quality for preventing diarrhoea

Thomas F. Clasen et al.

COCHRANE DATABASE OF SYSTEMATIC REVIEWS (2015)

Article Public, Environmental & Occupational Health

Water, sanitation, and hygiene (WASH), environmental enteropathy, nutrition, and early child development: making the links

Francis M. Ngure et al.

EVERY CHILD'S POTENTIAL: INTEGRATING NUTRITION AND EARLY CHILDHOOD DEVELOPMENT INTERVENTIONS (2014)

Article Biochemical Research Methods

Trimmomatic: a flexible trimmer for Illumina sequence data

Anthony M. Bolger et al.

BIOINFORMATICS (2014)

Article Multidisciplinary Sciences

Persistent gut microbiota immaturity in malnourished Bangladeshi children

Sathish Subramanian et al.

NATURE (2014)

Article Public, Environmental & Occupational Health

Severity of Diarrhea and Malnutrition among Under Five-Year-Old Children in Rural Bangladesh

Farzana Ferdous et al.

AMERICAN JOURNAL OF TROPICAL MEDICINE AND HYGIENE (2013)

Article Biochemistry & Molecular Biology

MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

Kazutaka Katoh et al.

MOLECULAR BIOLOGY AND EVOLUTION (2013)

Article Biochemistry & Molecular Biology

The SILVA ribosomal RNA gene database project: improved data processing and web-based tools

Christian Quast et al.

NUCLEIC ACIDS RESEARCH (2013)

Article Infectious Diseases

Symptomatic and Asymptomatic Campylobacter Infections Associated with Reduced Growth in Peruvian Children

Gwenyth Lee et al.

PLOS NEGLECTED TROPICAL DISEASES (2013)

Editorial Material Gastroenterology & Hepatology

Increased Expression of Brain-derived Neurotrophic Factor in Irritable Bowel Syndrome and Its Correlation With Abdominal Pain (Gut 2012;61:685-694)

Young-Eun Joo

JOURNAL OF NEUROGASTROENTEROLOGY AND MOTILITY (2013)

Article Biochemical Research Methods

SPAdes: A New Genome Assembly Algorithm and Its Applications to Single-Cell Sequencing

Anton Bankevich et al.

JOURNAL OF COMPUTATIONAL BIOLOGY (2012)

Article Biochemical Research Methods

Metagenomic microbial community profiling using unique clade-specific marker genes

Nicola Segata et al.

NATURE METHODS (2012)

Article Biochemical Research Methods

Fast gapped-read alignment with Bowtie 2

Ben Langmead et al.

NATURE METHODS (2012)

Article Biochemical Research Methods

Metabolic Reconstruction for Metagenomic Data and Its Application to the Human Microbiome

Sahar Abubucker et al.

PLOS COMPUTATIONAL BIOLOGY (2012)

Editorial Material Ecology

UniFrac: an effective distance metric for microbial community comparison

Catherine Lozupone et al.

ISME JOURNAL (2011)

Article Multidisciplinary Sciences

CORE: A Phylogenetically-Curated 16S rDNA Database of the Core Oral Microbiome

Ann L. Griffen et al.

PLOS ONE (2011)

Article Biotechnology & Applied Microbiology

Metagenomic biomarker discovery and explanation

Nicola Segata et al.

GENOME BIOLOGY (2011)

Article Biochemical Research Methods

edgeR: a Bioconductor package for differential expression analysis of digital gene expression data

Mark D. Robinson et al.

BIOINFORMATICS (2010)

Article Gastroenterology & Hepatology

Prolonged Episodes of Acute Diarrhea Reduce Growth and Increase Risk of Persistent Diarrhea in Children

Sean R. Moore et al.

GASTROENTEROLOGY (2010)

Article Multidisciplinary Sciences

FastTree 2-Approximately Maximum-Likelihood Trees for Large Alignments

Morgan N. Price et al.

PLOS ONE (2010)

Article Public, Environmental & Occupational Health

Multi-country analysis of the effects of diarrhoea on childhood stunting

William Checkley et al.

INTERNATIONAL JOURNAL OF EPIDEMIOLOGY (2008)

Review Nutrition & Dietetics

Malnutrition as an enteric infectious disease with long-term effects on child development

Richard L. Guerrant et al.

NUTRITION REVIEWS (2008)

Article Medicine, General & Internal

Malnutrition and infection: Complex mechanisms and global impacts

Ulrich E. Schaible et al.

PLOS MEDICINE (2007)

Review Microbiology

A guide for diagnostic evaluations

Rosanna W. Peeling et al.

NATURE REVIEWS MICROBIOLOGY (2006)

Article Microbiology

Genetic relatedness within the genus Campylobacter inferred from rpoB sequences

Boena M. Korczak et al.

INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY (2006)

Article Nutrition & Dietetics

Effect of Lactobacillus GG on intestinal integrity in Malawian children at risk of tropical enteropathy

L Galpin et al.

AMERICAN JOURNAL OF CLINICAL NUTRITION (2005)

Article Gastroenterology & Hepatology

Butyrate inhibits NF-κB activation in lamina propria macrophages of patients with ulcerative colitis

H Lührs et al.

SCANDINAVIAN JOURNAL OF GASTROENTEROLOGY (2002)

Article Biochemistry & Molecular Biology

The MetaCyc database

PD Karp et al.

NUCLEIC ACIDS RESEARCH (2002)

Article Immunology

Migration and maturation of human colonic dendritic cells

SJ Bell et al.

JOURNAL OF IMMUNOLOGY (2001)