4.7 Article

Cold denaturation induced helix-to-helix transition and its implication to activity of helical antifreeze protein

相关参考文献

注意:仅列出部分参考文献,下载原文获取全部文献信息。
Article Biochemistry & Molecular Biology

Exploring the role of hydrophilic amino acids in unfolding of protein in aqueous ethanol solution

Ritaban Halder et al.

Summary: The hydrophobic association and hydrophilic amino acids collectively contribute to the unfolding of proteins in aqueous ethanol solution, playing important roles in the interactions between ethanol and proteins.

PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2021)

Article Chemistry, Multidisciplinary

Heightened Cold-Denaturation of Proteins at the Ice-Water Interface

Andrea Arsiccio et al.

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2020)

Article Chemistry, Physical

Low temperature protein refolding suggested by molecular simulation

Daniel J. Kozuch et al.

JOURNAL OF CHEMICAL PHYSICS (2019)

Review Multidisciplinary Sciences

Antifreeze Proteins: An Unusual Tale of Structural Evolution, Hydration and Function

Sandipan Chakraborty et al.

PROCEEDINGS OF THE INDIAN NATIONAL SCIENCE ACADEMY (2019)

Article Chemistry, Physical

Solvation Layer of Antifreeze Proteins Analyzed with a Markov State Model

Sebastian Wellig et al.

JOURNAL OF PHYSICAL CHEMISTRY B (2018)

Article Chemistry, Multidisciplinary

Ice-Nucleating and Antifreeze Proteins Recognize Ice through a Diversity of Anchored Clathrate and Ice-like Motifs

Arpa Hudait et al.

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2018)

Article Chemistry, Physical

Crucial role of fragmented and isolated defects in persistent relaxation of deeply supercooled water

Shinji Saito et al.

JOURNAL OF CHEMICAL PHYSICS (2018)

Article Chemistry, Physical

Molecular Insights into the Unusual Structure of an Antifreeze Protein with a Hydrated Core

Sridip Parui et al.

JOURNAL OF PHYSICAL CHEMISTRY B (2018)

Article Chemistry, Multidisciplinary

The cold denaturation of IscU highlights structure-function dualism in marginally stable proteins

Robert Yan et al.

COMMUNICATIONS CHEMISTRY (2018)

Article Chemistry, Physical

Conformational and hydration properties modulate ice recognition by type I antifreeze protein and its mutants

Sandipan Chakraborty et al.

PHYSICAL CHEMISTRY CHEMICAL PHYSICS (2017)

Article Chemistry, Physical

Effect of alcohol on the structure of cytochrome C: FCS and molecular dynamics simulations

Md. Asif Amin et al.

JOURNAL OF CHEMICAL PHYSICS (2016)

Article Chemistry, Physical

Replica Exchange Molecular Dynamics Study of Dimerization in Prion Protein: Multiple Modes of Interaction and Stabilization

Neharika G. Chamachi et al.

JOURNAL OF PHYSICAL CHEMISTRY B (2016)

Article Chemistry, Physical

Water Mediated Interactions and the Protein Folding Phase Diagram in the Temperature-Pressure Plane

Brian J. Sirovetz et al.

JOURNAL OF PHYSICAL CHEMISTRY B (2015)

Article Multidisciplinary Sciences

A fully atomistic computer simulation study of cold denaturation of a β-hairpin

Changwon Yang et al.

NATURE COMMUNICATIONS (2014)

Article Multidisciplinary Sciences

Understanding water's anomalies with locally favoured structures

John Russo et al.

NATURE COMMUNICATIONS (2014)

Article Chemistry, Physical

Frequency dependence of specific heat in supercooled liquid water and emergence of correlated dynamics

Shinji Saito et al.

JOURNAL OF CHEMICAL PHYSICS (2013)

Article Multidisciplinary Sciences

Entropy-driven liquid-liquid separation in supercooled water

V. Holten et al.

SCIENTIFIC REPORTS (2012)

Article Chemistry, Physical

Peculiar Thermodynamics of the Second Critical Point in Supercooled Water

C. E. Bertrand et al.

JOURNAL OF PHYSICAL CHEMISTRY B (2011)

Article Chemistry, Multidisciplinary

NMR-Based Protein Potentials

Da-Wei Li et al.

ANGEWANDTE CHEMIE-INTERNATIONAL EDITION (2010)

Article Biology

The hydrophobic effect and its role in cold denaturation

Cristiano L. Dias et al.

CRYOBIOLOGY (2010)

Article Chemistry, Physical

On the molecular origin of cold denaturation of globular proteins

Giuseppe Graziano

PHYSICAL CHEMISTRY CHEMICAL PHYSICS (2010)

Article Biochemistry & Molecular Biology

Improved side-chain torsion potentials for the Amber ff99SB protein force field

Kresten Lindorff-Larsen et al.

PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS (2010)

Article Chemistry, Physical

Intermittent Dynamics, Stochastic Resonance and Dynamical Heterogeneity in Supercooled Liquid Water

Biman Jana et al.

JOURNAL OF PHYSICAL CHEMISTRY B (2009)

Article Chemistry, Physical

GROMACS 4: Algorithms for highly efficient, load-balanced, and scalable molecular simulation

Berk Hess et al.

JOURNAL OF CHEMICAL THEORY AND COMPUTATION (2008)

Article Chemistry, Physical

Mechanistic elements of protein cold denaturation

Carlos F. Lopez et al.

JOURNAL OF PHYSICAL CHEMISTRY B (2008)

Article Chemistry, Physical

A temperature predictor for parallel tempering simulations

Alexandra Patriksson et al.

PHYSICAL CHEMISTRY CHEMICAL PHYSICS (2008)

Article Physics, Multidisciplinary

Microscopic mechanism for cold denaturation

Cristiano L. Dias et al.

PHYSICAL REVIEW LETTERS (2008)

Article Chemistry, Multidisciplinary

Unbiased cold denaturation: Low- and high-temperature unfolding of yeast frataxin under physiological conditions

Annalisa Pastore et al.

JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2007)

Article Chemistry, Physical

A general purpose model for the condensed phases of water: TIP4P/2005

JLF Abascal et al.

JOURNAL OF CHEMICAL PHYSICS (2005)

Article Chemistry, Physical

Development of an improved four-site water model for biomolecular simulations: TIP4P-Ew

HW Horn et al.

JOURNAL OF CHEMICAL PHYSICS (2004)

Article Biochemistry & Molecular Biology

Designing a 20-residue protein

JW Neidigh et al.

NATURE STRUCTURAL BIOLOGY (2002)

Article Chemistry, Physical

Simple physical model of liquid water

H Tanaka

JOURNAL OF CHEMICAL PHYSICS (2000)