相关参考文献
注意:仅列出部分参考文献,下载原文获取全部文献信息。The role of plasmalogens, Forssman lipids, and sphingolipid hydroxylation in modulating the biophysical properties of the epithelial plasma membrane
Katie A. Wilson et al.
JOURNAL OF CHEMICAL PHYSICS (2021)
MLLPA: A Machine Learning-assisted Python module to study phase-specific events in lipid membranes
Vivien Walter et al.
JOURNAL OF COMPUTATIONAL CHEMISTRY (2021)
A Data-Driven Dimensionality Reduction Approach to Compare and Classify Lipid Force Fields
Riccardo Capelli et al.
JOURNAL OF PHYSICAL CHEMISTRY B (2021)
ProLint: a web-based framework for the automated data analysis and visualization of lipid-protein interactions
Besian Sejdiu et al.
NUCLEIC ACIDS RESEARCH (2021)
Effects of lipid heterogeneity on model human brain lipid membranes
Sze May Yee et al.
SOFT MATTER (2021)
Phase Separation in Atomistic Simulations of Model Membranes
Ruo-Xu Gu et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2020)
SciPy 1.0: fundamental algorithms for scientific computing in Python
Pauli Virtanen et al.
NATURE METHODS (2020)
Plasma membranes are asymmetric in lipid unsaturation, packing and protein shape
J. H. Lorent et al.
NATURE CHEMICAL BIOLOGY (2020)
Interleaflet Coupling of Lipid Nanodomains - Insights From in vitro Systems
Maria J. Sarmento et al.
FRONTIERS IN CELL AND DEVELOPMENTAL BIOLOGY (2020)
Understanding the Link between Lipid Diversity and the Biophysical Properties of the Neuronal Plasma Membrane
Katie A. Wilson et al.
BIOCHEMISTRY (2020)
Systematic errors in diffusion coefficients from long-time molecular dynamics simulations at constant pressure
Soeren von Buelow et al.
JOURNAL OF CHEMICAL PHYSICS (2020)
Capturing Biologically Complex Tissue-Specific Membranes at Different Levels of Compositional Complexity
Helgi I. Ingolfsson et al.
JOURNAL OF PHYSICAL CHEMISTRY B (2020)
Pivotal Role of Interdigitation in Interleaflet Interactions: Implications from Molecular Dynamics Simulations
Sangjae Seo et al.
JOURNAL OF PHYSICAL CHEMISTRY LETTERS (2020)
Two Coexisting Membrane Structures Are Defined by Lateral and Transbilayer Interactions between Sphingomyelin and Cholesterol
Paul Smith et al.
LANGMUIR (2020)
Composition dependence of cholesterol flip-flop rates in physiological mixtures
Swapnil Baral et al.
CHEMISTRY AND PHYSICS OF LIPIDS (2020)
Direct label-free imaging of nanodomains in biomimetic and biological membranes by cryogenic electron microscopy
Frederick A. Heberle et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2020)
Array programming with NumPy
Charles R. Harris et al.
NATURE (2020)
Structural and functional consequences of reversible lipid asymmetry in living membranes
Milka Doktorova et al.
NATURE CHEMICAL BIOLOGY (2020)
Flip-flop asymmetry of cholesterol in model membranes induced by thermal gradients
James W. Carter et al.
SOFT MATTER (2020)
Bicelle-to-Vesicle Transition of a Binary Phospholipid Mixture Guided by Controlled Local Lipid Compositions: A Molecular Dynamics Simulation Study
Kenichiro Koshiyama et al.
JOURNAL OF PHYSICAL CHEMISTRY B (2019)
Molecular Dynamics Simulations Reveal Leaflet Coupling in Compositionally Asymmetric Phase-Separated Lipid Membranes
Michael D. Weiner et al.
JOURNAL OF PHYSICAL CHEMISTRY B (2019)
Bilayer Membranes with Frequent Flip-Flops Have Tensionless Leaflets
Markus S. Miettinen et al.
NANO LETTERS (2019)
MemSurfer: A Tool for Robust Computation and Characterization of Curved Membranes
Harsh Bhatia et al.
JOURNAL OF CHEMICAL THEORY AND COMPUTATION (2019)
Lipid Acyl Chain cis Double Bond Position Modulates Membrane Domain Registration/Anti-Registration
Siya Zhang et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2019)
Analysis of Lipid Order States and Domains in Lipid Bilayer Simulations
Soohyung Park et al.
JOURNAL OF CHEMICAL THEORY AND COMPUTATION (2019)
Cholesterol Flip-Flop in Heterogeneous Membranes
Ruo-Xu Gu et al.
JOURNAL OF CHEMICAL THEORY AND COMPUTATION (2019)
Quantitative Assessment of Methods Used To Obtain Rate Constants from Molecular Dynamics Simulations-Translocation of Cholesterol across Lipid Bilayers
Hugo A. L. Filipe et al.
JOURNAL OF CHEMICAL THEORY AND COMPUTATION (2018)
Presence and Role of Midplane Cholesterol in Lipid Bilayers Containing Registered or Antiregistered Phase Domains
Michael D. Weiner et al.
JOURNAL OF PHYSICAL CHEMISTRY B (2018)
Cholesterol Flip-Flop Impacts Domain Registration in Plasma Membrane Models
Sebastian Thallmair et al.
JOURNAL OF PHYSICAL CHEMISTRY LETTERS (2018)
Facilitated and Non-Gaussian Diffusion of Cholesterol in Liquid Ordered Phase Bilayers Depends on the Flip-Flop and Spatial Arrangement of Cholesterol
Younghoon Oh et al.
JOURNAL OF PHYSICAL CHEMISTRY LETTERS (2018)
FATSLiM: a fast and robust software to analyze MD simulations of membranes
Sebastien Buchoux
BIOINFORMATICS (2017)
Computational Lipidomics of the Neuronal Plasma Membrane
Helgi I. Ingolfsson et al.
BIOPHYSICAL JOURNAL (2017)
Undulations Drive Domain Registration from the Two Membrane Leaflets
Timur R. Galimzyanov et al.
BIOPHYSICAL JOURNAL (2017)
Interleaf let Coupling, Pinning, and Leaflet Asymmetry-Major Players in Plasma Membrane Nanodomain Formation
Toyoshi Fujimoto et al.
FRONTIERS IN CELL AND DEVELOPMENTAL BIOLOGY (2017)
Cholesterol's location in lipid bilayers
Drew Marquardt et al.
CHEMISTRY AND PHYSICS OF LIPIDS (2016)
Domain Stability in Biomimetic Membranes Driven by Lipid Polyunsaturation
Xubo Lin et al.
JOURNAL OF PHYSICAL CHEMISTRY B (2016)
Roles of Interleaflet Coupling and Hydrophobic Mismatch in Lipid Membrane Phase-Separation Kinetics
Philip W. Fowler et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2016)
Alteration of interleaflet coupling due to compounds displaying rapid translocation in lipid membranes
Ramon Reigada
SCIENTIFIC REPORTS (2016)
Hexagonal Substructure and Hydrogen Bonding in Liquid-Ordered Phases Containing Palmitoyl Sphingomyelin
Alexander J. Sodt et al.
BIOPHYSICAL JOURNAL (2015)
Lateral organization, bilayer asymmetry, and inter-leaflet coupling of biological membranes
Jonathan D. Nickels et al.
CHEMISTRY AND PHYSICS OF LIPIDS (2015)
Parameters for Martini sterols and hopanoids based on a virtual-site description
M. N. Melo et al.
JOURNAL OF CHEMICAL PHYSICS (2015)
CHARMM-GUI Martini Maker for Coarse-Grained Simulations with the Martini Force Field
Yifei Qi et al.
JOURNAL OF CHEMICAL THEORY AND COMPUTATION (2015)
Multiscale Modeling of Four-Component Lipid Mixtures: Domain Composition, Size, Alignment, and Properties of the Phase Interface
David G. Ackerman et al.
JOURNAL OF PHYSICAL CHEMISTRY B (2015)
Lightweight Object Oriented Structure Analysis: Tools for Building Tools to Analyze Molecular Dynamics Simulations
Tod D. Romo et al.
JOURNAL OF COMPUTATIONAL CHEMISTRY (2014)
The Molecular Structure of the Liquid-Ordered Phase of Lipid Bilayers
Alexander J. Sodt et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2014)
Lipid Organization of the Plasma Membrane
Helgi I. Ingolfsson et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2014)
Lipid Clustering Correlates with Membrane Curvature as Revealed by Molecular Simulations of Complex Lipid Bilayers
Heidi Koldso et al.
PLOS COMPUTATIONAL BIOLOGY (2014)
Cholesterol Trans location in a Phospholipid Membrane
Amit Choubey et al.
BIOPHYSICAL JOURNAL (2013)
Rapid flip-flop motions of diacylglycerol and ceramide in phospholipid bilayers
Fumiko Ogushi et al.
CHEMICAL PHYSICS LETTERS (2012)
Signaling from the Living Plasma Membrane
Heman E. Grecco et al.
CELL (2011)
Software News and Updates MDAnalysis: A Toolkit for the Analysis of Molecular Dynamics Simulations
Naveen Michaud-Agrawal et al.
JOURNAL OF COMPUTATIONAL CHEMISTRY (2011)
Interleaflet Interaction and Asymmetry in Phase Separated Lipid Bilayers: Molecular Dynamics Simulations
Jason D. Perlmutter et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2011)
Glycosphingolipid behaviour in complex membranes
Alessandro Prinetti et al.
BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES (2009)
How the molecular features of glycosphingolipids affect domain formation in fluid membranes
Bodil Westerlund et al.
BIOCHIMICA ET BIOPHYSICA ACTA-BIOMEMBRANES (2009)
Molecular View of Cholesterol Flip-Flop and Chemical Potential in Different Membrane Environments
W. F. Drew Bennett et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2009)
The effect of cholesterol on short- and long-chain monounsaturated lipid bilayers as determined by molecular dynamics simulations and x-ray scattering
Norbert Kucerka et al.
BIOPHYSICAL JOURNAL (2008)
Replacing the cholesterol hydroxyl group with the ketone group facilitates sterol flip-flop and promotes membrane fluidity
Tomasz Rog et al.
JOURNAL OF PHYSICAL CHEMISTRY B (2008)
The molecular face of lipid rafts in model membranes
H. Jelger Risselada et al.
PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA (2008)
Molecular mechanism for lipid flip-flops
Andrey A. Gurtovenko et al.
JOURNAL OF PHYSICAL CHEMISTRY B (2007)
The MARTINI force field: Coarse grained model for biomolecular simulations
Siewert J. Marrink et al.
JOURNAL OF PHYSICAL CHEMISTRY B (2007)
Gangliosides as components of lipid membrane domains
Sandro Sonnino et al.
GLYCOBIOLOGY (2007)
Lipids out of equilibrium: Energetics of desorption and pore mediated flip-flop
D. Peter Tieleman et al.
JOURNAL OF THE AMERICAN CHEMICAL SOCIETY (2006)